FC929873

Overview
NameFC929873
Unique NameFC929873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: M3K6_HUMAN (Mitogen-activated protein kinase kinase kinase 6 OS=Homo sapiens GN=MAP3K6 PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 9.436e-13
Identity = 55/169 (32.54%), Postives = 88/169 (52.07%), Query Frame = 2
Query:  197 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL---EIARGLVYLHEECNVPIIHCDIKPQNILLDNYFS-AKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 691
            LG+G++G+VY G  +    + IA+K++        +    E++   R  HKN+V+ LG   +     +  E +  G+L++L+ ++  P  +    IS    +I +GL YLH+     I+H DIK  N+L++ +    KISDFG SK L      T T   GT  Y+APE
Sbjct:  654 LGKGTYGVVYAGRDRHTRVR-IAIKEIPERDSRFSQPLHEEIALHRRLRHKNIVRYLGSASQGGYLKIFMEEVPGGSLSSLLRSVWGPLKDNESTISFYTRQILQGLGYLHDN---HIVHRDIKGDNVLINTFSGLLKISDFGTSKRLAGITPCTET-FTGTLQYMAPE 817          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: M313A_XENLA (Mitogen-activated protein kinase kinase kinase 13-A OS=Xenopus laevis GN=map3k13-A PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.436e-13
Identity = 57/168 (33.93%), Postives = 91/168 (54.17%), Query Frame = 2
Query:  197 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQ 700
            LG G+ G V+ G  +   G+ +A+KK+      RE++ ++++  + +  H N++   G C +A    L+ E+  +G L  ++ A  K    L V  S  IA G+ YLH      IIH D+K  N+L+ +  + KISDFG SK  LSD+S T     GT  ++APE ++
Sbjct:  175 LGSGAQGAVFLGKFR---GEEVAIKKV------REQK-ETDIKHLRKLKHPNIIAFKGVCTQAPCYCLIMEYCAHGQLYEVLRAGRKVSPRLLVDWSNGIASGMNYLHLH---KIIHRDLKSPNVLVTHTDTVKISDFGTSK-ELSDKS-TKMSFAGTVAWMAPEVIR 327          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: JAK2_CHICK (Tyrosine-protein kinase JAK2 OS=Gallus gallus GN=JAK2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.436e-13
Identity = 49/158 (31.01%), Postives = 85/158 (53.80%), Query Frame = 2
Query:  185 FKEELGRGSFGIVYK---GVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEA--LNRLLVYEFMGNGTLANLIFA-IPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQ 640
            F ++LG+G+FG V       L+  +G+ +AVKKL    +E  R+F+ E+  +    H N+V+  G C  A   N  L+ E++  G+L + +     + D    +  + +I +G+ YL  +     +H D+  +NIL++N    KI DFGL+K+L  D+
Sbjct:  848 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLIMEYLPYGSLRDYLQKHKERLDHKKLLLYASQICKGMEYLGTK---RYVHRDLATRNILVENENRVKIGDFGLTKVLPQDK 1002          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: HAL4_YEAST (Serine/threonine-protein kinase HAL4/SAT4 OS=Saccharomyces cerevisiae GN=SAT4 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.436e-13
Identity = 61/212 (28.77%), Postives = 101/212 (47.64%), Query Frame = 2
Query:  101 ENNVQDSSTSETNLRLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASG-------KAIAVKKLDRLAQEREREFK----SEVSAIGRTHHKNLVQLLGFCDEALNRLL-VYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTM--IRGTRGYVAPE 691
            +NN  + +T++ + + F+     E  G  +E LG+G+FG+V     K+ S        K  AVK+  R   E   ++     SE       HH N+V  L    +A      V E+   G L  L+ A  K ++        ++ RG+VY+HE   + + H D+KP+N+LL +    KI+DFG S+   ++ +   H    + G+  Y+APE
Sbjct:  295 KNNTHNITTTKKDRQCFA-----EKYGRCQEVLGKGAFGVVRICQKKNVSSQDGNKSEKLYAVKEFKRRTSESAEKYSKRLTSEFCISSSLHHTNIVTTLDLFQDAKGEYCEVMEYCAGGDLFTLVVAAGKLEYMEADCFFKQLIRGVVYMHE---MGVCHRDLKPENLLLTHDGVLKITDFGNSECFKMAWEKNIHLSGGVCGSSPYIAPE 498          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: FER_HUMAN (Proto-oncogene tyrosine-protein kinase Fer OS=Homo sapiens GN=FER PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 9.436e-13
Identity = 49/146 (33.56%), Postives = 77/146 (52.74%), Query Frame = 2
Query:  191 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR--VRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK 622
            E LG+G+FG VYKG LK  +  A+   K D L QE + +F  E   + +  H N+V+L+G C +     ++ E +  G     +    K +  L+  V+ SL+ A G++YL  +     IH D+  +N L+      KISDFG+S+
Sbjct:  567 ELLGKGNFGEVYKGTLKDKTSVAVKTCKED-LPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPVYIIMELVSGGDFLTFL-RRKKDELKLKQLVKFSLDAAAGMLYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSR 707          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: EPHB2_CHICK (Ephrin type-B receptor 2 OS=Gallus gallus GN=EPHB2 PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 9.436e-13
Identity = 64/208 (30.77%), Postives = 103/208 (49.52%), Query Frame = 2
Query:  149 FSYNELKEATGGFKEEL-----------GRGSFGIVYKGVLKSASGKAI--AVKKLDR-LAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQS-RTHTMIRGTR---GYVAPEWVQ 700
            F+Y +  EA   F +E+           G G FG V  G LK    + I  A+K L     +++ R+F SE S +G+  H N++ L G   ++   +++ EFM NG+L + +      F + +    LR      IA G+ YL    ++  +H D+  +NIL+++    K+SDFGLS+ L  D S  T+T   G +    + APE +Q
Sbjct:  618 FTYEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSSPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR-----GIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 817          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: DST2_DICDI (Serine/threonine-protein kinase dst2 OS=Dictyostelium discoideum GN=dst2 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.436e-13
Identity = 53/171 (30.99%), Postives = 84/171 (49.12%), Query Frame = 2
Query:  191 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVR-ISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQ 700
            EE+  GSFG VYKG     +G  +AVK +     E   +   E+  + R +H N+V+  G   +     +  E  G G++  +   +  P    ++  +  E  +GL YLH   +  +IH D+K  NILL      K++DFG+S LL  D+S       GT  ++APE ++
Sbjct:   24 EEIAEGSFGTVYKGK-HLPTGNIMAVKIIALDEDETFEDLVVEIDILNRCNHNNIVKYYGSWVKGDELFIAMECCGGGSITEIYQELNIPLNESQIAYVCRETLKGLEYLH---HTNVIHRDLKGANILLTESGDVKLADFGVSGLL--DKSSKRNTFIGTPYWMAPEVIE 188          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CTK1_SCHPO (CTD kinase subunit alpha OS=Schizosaccharomyces pombe GN=lsk1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.436e-13
Identity = 51/159 (32.08%), Postives = 88/159 (55.35%), Query Frame = 2
Query:  191 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERER---EFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFA-IPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT 655
            +++G G++G VYK +  + +G  +A+K++ RL QE++        EV  + R  HKN+V+LL    E  +  +V+E+M +     L+ + +     N++  +S +I   L YLH      ++H DIK  NILL+N    K +DFGL++   S +S  +T
Sbjct:  281 DQIGEGTYGKVYKAI-NTVTGDLVALKRI-RLEQEKDGFPITTVREVKILQRLRHKNIVRLLEIMVEKSSVYMVFEYMDHDLTGVLLNSQLHFTPGNIK-HLSKQIFEALAYLHHR---GVLHRDIKGSNILLNNNGDLKFADFGLARFNTSSKSANYT 433          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CIPKX_ORYSJ (CBL-interacting protein kinase 33 OS=Oryza sativa subsp. japonica GN=CIPK33 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.436e-13
Identity = 56/187 (29.95%), Postives = 91/187 (48.66%), Query Frame = 2
Query:  152 SYNELKEATGGFK--EELGRGSFGIVYKGVLKSASGKAIAVKKLDR---LAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKL--LLSDQSRTHTMIRGTRGYVAPE 691
            S  ++K   G ++    +G G+F  V K    + +G  +A+K LD+   L  +   + K E+S +    H N+V++        N  +V E++  G L + I    +   +   R   ++   + Y H      + H D+KP+N+LLD+Y + K+SDFGLS L   + D    HT   GT  YVAPE
Sbjct:    2 STTKVKRRVGKYELGRTIGEGTFAKV-KFARDTETGDPVAIKILDKEKVLKHKMVEQIKREISTMKLIKHPNVVRIYEVMGSKTNIYIVLEYVTGGELFDTIVNHGRMREDEARRYFQQLINAVDYCHSR---GVYHRDLKPENLLLDSYGNLKVSDFGLSALSQQIKDDGLLHTTC-GTPNYVAPE 183          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CDS1_SCHPO (Serine/threonine-protein kinase cds1 OS=Schizosaccharomyces pombe GN=cds1 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 9.436e-13
Identity = 54/172 (31.40%), Postives = 90/172 (52.33%), Query Frame = 2
Query:  197 LGRGSFGIVYKGVLKSASGKAIAVKKLDRL------AQERERE-FKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 691
            LG G+F +V K  ++  SGK  A+K +++       +++R  E F+ E+  +   HH  +VQ     +      +V E++  G L + + A    D      +  ++   L++LH++    + H DIKP+NIL+ N F  KISDFGL+K++    +   T   GT GY+APE
Sbjct:  173 LGSGTFAVV-KLAVEVNSGKWYAIKIINKRKILLTSSEKRATEMFQREIDILKSLHHPGVVQCHEIFENDDELFIVMEYVEGGDLMDFLIANGSIDEQDCKPLLKQLLETLLHLHKQ---GVTHRDIKPENILITNDFHLKISDFGLAKVIHGTGTFLETFC-GTMGYLAPE 339          
The following BLAST results are available for this feature:
BLAST of FC929873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
M3K6_HUMAN9.436e-1332.54Mitogen-activated protein kinase kinase kinase 6 O... [more]
M313A_XENLA9.436e-1333.93Mitogen-activated protein kinase kinase kinase 13-... [more]
JAK2_CHICK9.436e-1331.01Tyrosine-protein kinase JAK2 OS=Gallus gallus GN=J... [more]
HAL4_YEAST9.436e-1328.77Serine/threonine-protein kinase HAL4/SAT4 OS=Sacch... [more]
FER_HUMAN9.436e-1333.56Proto-oncogene tyrosine-protein kinase Fer OS=Homo... [more]
EPHB2_CHICK9.436e-1330.77Ephrin type-B receptor 2 OS=Gallus gallus GN=EPHB2... [more]
DST2_DICDI9.436e-1330.99Serine/threonine-protein kinase dst2 OS=Dictyostel... [more]
CTK1_SCHPO9.436e-1332.08CTD kinase subunit alpha OS=Schizosaccharomyces po... [more]
CIPKX_ORYSJ9.436e-1329.95CBL-interacting protein kinase 33 OS=Oryza sativa ... [more]
CDS1_SCHPO9.436e-1331.40Serine/threonine-protein kinase cds1 OS=Schizosacc... [more]

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Properties
Property NameValue
Genbank descriptionC34001D03EF PostHarvC1 Citrus clementina cDNA clone C34001D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929873 ID=FC929873; Name=FC929873; organism=Citrus clementina; type=EST; length=723bp
ATTCTTATTAGGTCCTTTCCTGCGAGGAAGTTCTATATTCTGCAATGCCT
TTCTGCTGCTAGCAATACTTATCCTTTTAAAGTGGCGCAGGAGAAAGTAT
GAAAATAATGTCCAAGATTCAAGCACTTCCGAAACAAATCTGCGATTATT
TTCCTATAACGAACTTAAAGAAGCGACAGGCGGGTTCAAAGAAGAACTGG
GCCGGGGTTCTTTTGGCATAGTTTACAAAGGAGTCCTCAAATCTGCTTCA
GGAAAGGCTATAGCTGTCAAGAAACTGGACAGGTTAGCTCAAGAAAGGGA
ACGGGAATTCAAATCTGAAGTGAGTGCAATTGGGAGAACTCATCACAAGA
ATCTAGTCCAGTTACTTGGATTCTGTGATGAAGCTCTCAACCGGCTTTTA
GTATACGAATTCATGGGCAATGGCACTTTGGCAAACTTAATATTTGCAAT
TCCAAAGCCTGACTGGAATCTCCGAGTTCGGATTTCACTGGAAATTGCAA
GAGGGCTTGTGTACTTGCATGAAGAGTGCAATGTGCCCATCATTCACTGC
GATATAAAGCCTCAAAACATACTTCTAGATAACTATTTCAGCGCAAAAAT
TTCTGACTTTGGATTATCCAAGTTGTTACTCTCTGATCAGTCTCGAACAC
ATACCATGATCAGAGGAACTCGGGGATATGTGGCTCCAGAATGGGTTCAG
ATGCACCTATCTCAGCCAAAGTG
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