FC929873

Overview
NameFC929873
Unique NameFC929873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CDC2_CARAU (Cell division control protein 2 homolog OS=Carassius auratus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.436e-13
Identity = 56/174 (32.18%), Postives = 97/174 (55.75%), Query Frame = 2
Query:  191 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS---LEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPE 691
            E++G G++G+VYKG  K+ +G+ +A+KK+ RL  E E    +   E+S +    H N+V+LL    +     LV+EF+    L   + +IP   +   + +     +I  G+++ H  C   ++H D+KPQN+L+DN    K++DFGL++   +  +  TH ++  T  Y APE
Sbjct:    8 EKIGEGTYGVVYKGRNKT-TGQVVAMKKI-RLESEEEGVPSTAVREISLLKELQHPNVVRLLDVLMQESKLYLVFEFLSMD-LKKYLDSIPSGQFMDPMLVKSYLYQILEGILFCH--CR-RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGVPVRVYTHEVV--TLWYRAPE 173          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: STK6_MOUSE (Serine/threonine-protein kinase 6 OS=Mus musculus GN=Aurka PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12
Identity = 56/178 (31.46%), Postives = 87/178 (48.88%), Query Frame = 2
Query:  197 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQMHLSQPK 721
            LG+G FG VY    +  S   +A+K L +   E+   E + + EV       H N+++L G+  +A    L+ E+   GT+   +  + K D         E+A  L Y H +    +IH DIKP+N+LL +    KI+DFG S  + +  SR  TM  GT  Y+ PE ++  +   K
Sbjct:  130 LGKGKFGNVYLA-RERQSKFILALKVLFKTQLEKANVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTMC-GTLDYLPPEMIEGRMHDEK 300          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: MYLK_MOUSE (Myosin light chain kinase, smooth muscle OS=Mus musculus GN=Mylk PE=1 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12
Identity = 57/200 (28.50%), Postives = 100/200 (50.00%), Query Frame = 2
Query:  116 DSSTSETNLRLFSYNELKEATGGF--KEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR----VRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKIS--DFGLSKLLLSDQSRTHTMIRGTRGYVAPE 691
            D    E + R  + N  ++ +  +  +E LG G FG V++ V K  +GK  A K     + + +   + E+S +   HH  LVQ +   +E  N ++V E +  G L   I      D+ L     ++   +I+ G+ Y+H++    I+H D+KP+NI+  N    +I   DFGL++ L  + + +  ++ GT  +VAPE
Sbjct: 1463 DEKEPEVDYRTVTVNTEQKVSDVYDIEERLGSGKFGQVFRLVEKK-TGKIWAGKFFKAYSAKEKDNIRQEISIMNCLHHPKLVQCVDAFEEKANIVMVLEIVSGGELFERII---DEDFELTERECIKYMRQISEGVEYIHKQ---GIVHLDLKPENIMCVNKTGTRIKLIDFGLARRL--ENAGSLKVLFGTPEFVAPE 1653          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: MRH1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MRH1 OS=Arabidopsis thaliana GN=MRH1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12
Identity = 48/165 (29.09%), Postives = 82/165 (49.70%), Query Frame = 2
Query:  134 TNLRLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIA---VKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC--DEALNRLLVYEFMGNGTLANLIF--AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISD 607
            T +   + +EL+ A   F   +       VYKG L S    A+A   + +     +  E  ++ ++  + R +HKN V L+G+C  D+  NR++V+E+  NGTL   +        DW+ R+RI +  A  L ++H   N P+ H D     I L + ++AK+S+
Sbjct:  369 TGVPKLNRSELETACEDFSNIIETFDGYTVYKGTLSSGVEIAVASTAIAESKEWTRAMEMAYRRKIDTLSRINHKNFVNLIGYCEEDDPFNRMMVFEYAPNGTLFEHLHDKETEHLDWSARMRIIMGTAYCLQHMH-GMNPPMAHTDFNSSEIYLTDDYAAKVSE 532          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: FHKC_DICDI (Probable serine/threonine-protein kinase fhkC OS=Dictyostelium discoideum GN=fhkC PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12
Identity = 57/174 (32.76%), Postives = 87/174 (50.00%), Query Frame = 2
Query:  188 KEELGRGSFGIVYKGVLKSASGKAIAVKKLDR----LAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILL--DNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 691
            +E LG G+F  V  GV K  +G   A+K +D+    +  +R+     EV+ + +  H+N++ +    +   N  LV E +  G L + I +  K   +    I  ++   + YLH      I H D+KP+NILL   N F  KISDFGLS+ +  D+      + GT  YVAPE
Sbjct:  221 REVLGTGNFASVRLGVEKE-TGNKYAIKIIDKKKMSMTSKRKDSLMDEVNVLTKVKHQNIISIKEVFETQKNLYLVLELVTGGELFDKIVSERKFQEDTCRYILKQLCDSVRYLHSN---GIAHRDLKPENILLATPNSFLLKISDFGLSRAM--DEGTYMKTMCGTPQYVAPE 388          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: DKF2_CAEBR (Serine/threonine-protein kinase dkf-2 OS=Caenorhabditis briggsae GN=dkf-2 PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12
Identity = 58/200 (29.00%), Postives = 98/200 (49.00%), Query Frame = 2
Query:  116 DSSTSETNLRLFSYNELKEATGGFKEE-LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERERE--FKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVYLHEECNVPIIHCDIKPQNILLD---NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 691
            +  T     ++ +  E  +    F EE LG G FG VY G+ +  +G+ +AVK +D+L     +E   ++EV  + +  H  +V  +    E  +R+ V      G +  +I +  K   + R    L  +I   L YLH +    I+HCD+KP+NILL+   ++   K+ DFG ++++     R   +  GT  Y+APE
Sbjct:  869 EGETGHLGAKIQTEQEFSQLYQIFAEEVLGSGQFGTVYGGIHRR-NGQHVAVKLIDKLKFPPNKEDLLRAEVQILEQVDHPGVVHFMQML-ETTDRIFVVMEKLKGDMLEMILSSEKGRLSERTTQFLVAQILEALRYLHHQ---NIVHCDLKPENILLNSNSDFPQVKLCDFGFARIIGEKSFRRSVV--GTPAYLAPE 1061          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CST1_CAEEL (Serine/threonine-protein kinase cst-1 OS=Caenorhabditis elegans GN=cst-1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12
Identity = 58/199 (29.15%), Postives = 105/199 (52.76%), Query Frame = 2
Query:  107 NVQDSSTSETNLRLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQ 700
            N ++ S+    L   + N+  E       +LG GS+G V+K + +  SG  +A+KK+        +E   E+S + +   K +V+  G   +  +  +V E+ G G++++++ A  KP     +   L +  +GL YLH+   +  IH DIK  NILL+    AK++DFG++  L    ++ +T+I GT  ++APE ++
Sbjct:   11 NSEEGSSDGFKLDSSALNKPPEEVFDIVGKLGEGSYGSVHKAIHRE-SGHVLAIKKVP--VDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVI-GTPFWMAPEVIE 202          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y9844_DICDI (Probable serine/threonine-protein kinase DDB_G0282963 OS=Dictyostelium discoideum GN=DDB_G0282963 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12
Identity = 56/170 (32.94%), Postives = 90/170 (52.94%), Query Frame = 2
Query:  191 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPD--WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 691
            +++G GSF  VYK       G+ +A+K L   A   + E FK E   +     +NL++  G C E   R+ V E+  +G+L + I +  K D  W L  +   +   G+  LH      ++H DIK QN+L+++ F  K++DFGL+K     Q+ +++ I+GT  Y APE
Sbjct: 1480 KKIGAGSFSKVYKA---KYMGEIVAIKVLKGEATSEQIELFKKEYDILSLVSSQNLIKFYGACKEKKLRM-VTEYCQHGSLYH-IMSKRKMDISWPLVFKWMHQAVDGINSLHT-MRPALVHRDIKSQNLLINSQFDLKVADFGLAK-PTELQTGSNSTIKGTMAYCAPE 1642          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y0138_DICDI (Probable serine/threonine-protein kinase DDB_G0278509 OS=Dictyostelium discoideum GN=DDB_G0278509 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12
Identity = 52/175 (29.71%), Postives = 91/175 (52.00%), Query Frame = 2
Query:  107 NVQDSSTSETNLRLFSYN-ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTH-HKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFA--IPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLS 619
            N+  S+T+ T L    Y  E+      F   +G+G F  VY GV +S   K +A+K+++    +   +F+ EV  + +   H+NL+   G C  A    ++ E++  G+L +L+    + K D+  +V  ++ +A G  +L      PI H D+K +N+L+ N    KI+DFGL+
Sbjct:  921 NLSTSTTNITKLPRIKYTWEIDFDEIQFFNLIGQGGFSKVYHGVWRS---KDVAIKQIELQNNKSLDDFRREVGILSKLKPHENLLAYYGACKHANYCYIITEYLPRGSLHDLLHREQLMKLDFKQKVSFAICVALGCYHL-STYEPPIYHTDLKTKNLLVTNALKIKIADFGLA 1091          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: M3K10_XENLA (Mitogen-activated protein kinase kinase kinase 10 OS=Xenopus laevis GN=map3k10 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12
Identity = 58/185 (31.35%), Postives = 90/185 (48.65%), Query Frame = 2
Query:  191 EELGRGSFGIVYKGVLKSASGKAIAVKKL----DRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILL------DNYF--SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQMHL 709
            E +G G FG VYKG+ +    + +AVK +    D          + E        H N++ L G C +  +  LV E+   G L   + A  K   ++ V  +++IA+G+ YLH E  VPIIH D+   NIL+      D+ F  +  I+DFGL++     Q  T     GT  ++APE +++ L
Sbjct:  122 EIIGVGGFGKVYKGLWRD---EEVAVKAVRHDPDEDINVTAENVRQEAKIFCMLCHPNIIALTGVCLKPPHLCLVMEYARGGPLHRAL-AGKKVPAHVLVNWAVQIAKGMTYLHNEAIVPIIHRDLGSSNILILEKAENDDLFNKTLNITDFGLAR---EWQKTTKMSAAGTYAWMAPEVIRLSL 299          
The following BLAST results are available for this feature:
BLAST of FC929873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2_CARAU9.436e-1332.18Cell division control protein 2 homolog OS=Carassi... [more]
STK6_MOUSE1.232e-1231.46Serine/threonine-protein kinase 6 OS=Mus musculus ... [more]
MYLK_MOUSE1.232e-1228.50Myosin light chain kinase, smooth muscle OS=Mus mu... [more]
MRH1_ARATH1.232e-1229.09Probable LRR receptor-like serine/threonine-protei... [more]
FHKC_DICDI1.232e-1232.76Probable serine/threonine-protein kinase fhkC OS=D... [more]
DKF2_CAEBR1.232e-1229.00Serine/threonine-protein kinase dkf-2 OS=Caenorhab... [more]
CST1_CAEEL1.232e-1229.15Serine/threonine-protein kinase cst-1 OS=Caenorhab... [more]
Y9844_DICDI1.609e-1232.94Probable serine/threonine-protein kinase DDB_G0282... [more]
Y0138_DICDI1.609e-1229.71Probable serine/threonine-protein kinase DDB_G0278... [more]
M3K10_XENLA1.609e-1231.35Mitogen-activated protein kinase kinase kinase 10 ... [more]

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Properties
Property NameValue
Genbank descriptionC34001D03EF PostHarvC1 Citrus clementina cDNA clone C34001D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929873 ID=FC929873; Name=FC929873; organism=Citrus clementina; type=EST; length=723bp
ATTCTTATTAGGTCCTTTCCTGCGAGGAAGTTCTATATTCTGCAATGCCT
TTCTGCTGCTAGCAATACTTATCCTTTTAAAGTGGCGCAGGAGAAAGTAT
GAAAATAATGTCCAAGATTCAAGCACTTCCGAAACAAATCTGCGATTATT
TTCCTATAACGAACTTAAAGAAGCGACAGGCGGGTTCAAAGAAGAACTGG
GCCGGGGTTCTTTTGGCATAGTTTACAAAGGAGTCCTCAAATCTGCTTCA
GGAAAGGCTATAGCTGTCAAGAAACTGGACAGGTTAGCTCAAGAAAGGGA
ACGGGAATTCAAATCTGAAGTGAGTGCAATTGGGAGAACTCATCACAAGA
ATCTAGTCCAGTTACTTGGATTCTGTGATGAAGCTCTCAACCGGCTTTTA
GTATACGAATTCATGGGCAATGGCACTTTGGCAAACTTAATATTTGCAAT
TCCAAAGCCTGACTGGAATCTCCGAGTTCGGATTTCACTGGAAATTGCAA
GAGGGCTTGTGTACTTGCATGAAGAGTGCAATGTGCCCATCATTCACTGC
GATATAAAGCCTCAAAACATACTTCTAGATAACTATTTCAGCGCAAAAAT
TTCTGACTTTGGATTATCCAAGTTGTTACTCTCTGATCAGTCTCGAACAC
ATACCATGATCAGAGGAACTCGGGGATATGTGGCTCCAGAATGGGTTCAG
ATGCACCTATCTCAGCCAAAGTG
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