FC929873

Overview
NameFC929873
Unique NameFC929873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15224 contig Ccv1_Contig15224:435..1157. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: M313B_XENLA (Mitogen-activated protein kinase kinase kinase 13-B OS=Xenopus laevis GN=map3k13-B PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12
Identity = 56/168 (33.33%), Postives = 90/168 (53.57%), Query Frame = 2
Query:  197 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQ 700
            LG G+ G V+ G  +   G+ +A+KK+      RE++ ++++  + +  H N++   G C +A    ++ E+   G L  ++ A  K    L V  S  IA G+ YLH      IIH D+K  N+L+ +  + KISDFG SK  LSD+S T     GT  ++APE ++
Sbjct:  177 LGSGAQGAVFLGKFR---GEEVAIKKV------REQK-ETDIKHLRKLKHPNIIAFKGVCTQAPCYCILMEYCAQGQLYEVLRAGRKVTPKLLVEWSTGIASGMNYLHLH---KIIHRDLKSPNVLVTHADTVKISDFGTSK-ELSDKS-TKMSFAGTVAWMAPEVIR 329          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: KCC1G_RAT (Calcium/calmodulin-dependent protein kinase type 1G OS=Rattus norvegicus GN=Camk1g PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12
Identity = 60/206 (29.13%), Postives = 99/206 (48.06%), Query Frame = 2
Query:   92 RKYENNVQDSSTSETNLRLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIF---AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILL---DNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 691
            RK E +        TN+R          T  F E LG G+F  V+  V +  +GK  A+K + +    R+   ++E++ + R  H+N+V L    +   +  LV + +  G L + I       + D +L ++   ++   + YLHE     I+H D+KP+N+L    +      I+DFGLSK+   +Q+   +   GT GYVAPE
Sbjct:    3 RKEEEDCSSWKKQTTNIR---------KTFIFMEVLGSGAFSEVFL-VKQRVTGKLFALKCIKKSPAFRDSSLENEIAVLKRIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQ---QVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGVMSTACGTPGYVAPE 189          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: KCC1G_MOUSE (Calcium/calmodulin-dependent protein kinase type 1G OS=Mus musculus GN=Camk1g PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12
Identity = 60/206 (29.13%), Postives = 99/206 (48.06%), Query Frame = 2
Query:   92 RKYENNVQDSSTSETNLRLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIF---AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILL---DNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 691
            RK E +        TN+R          T  F E LG G+F  V+  V +  +GK  A+K + +    R+   ++E++ + R  H+N+V L    +   +  LV + +  G L + I       + D +L ++   ++   + YLHE     I+H D+KP+N+L    +      I+DFGLSK+   +Q+   +   GT GYVAPE
Sbjct:    3 RKEEEDCSSWKKQTTNIR---------KTFIFMEVLGSGAFSEVFL-VKQRVTGKLFALKCIKKSPAFRDSSLENEIAVLKRIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQ---QVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGVMSTACGTPGYVAPE 189          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: IPL1_YARLI (Spindle assembly checkpoint kinase OS=Yarrowia lipolytica GN=IPL1 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12
Identity = 61/208 (29.33%), Postives = 99/208 (47.60%), Query Frame = 2
Query:   86 RRRKYENNVQDSSTSETNLRLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDR---LAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQ 700
            RR  Y  +     T  T  R +S ++ +       + LG+G FG VY  V    +G   A+K +++   +    E++F+ EV       H N+++L G   +     L+ E++ +G L  L+    +   +       +++  L+YLH +    IIH DIKP+NILL    + KISDFG S   +   S   + + GT  Y+ PE VQ
Sbjct:   73 RRSSYTTDPPSPLTGITGFRNYSLDDFE-----IGKALGKGKFGKVYL-VKDKKTGFVSALKCMEKKELVEGNVEKQFRREVEIQSNLRHTNVLRLFGHFHDKDRVYLILEYVVHGELYKLLRNQKRFTESTASSYIYQMSEALLYLHGK---NIIHRDIKPENILLHFNDTIKISDFGWS---VHAPSNRRSTLCGTMDYLPPEIVQ 268          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: FHKA_DICDI (Probable serine/threonine-protein kinase fhkA OS=Dictyostelium discoideum GN=fhkA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12
Identity = 61/210 (29.05%), Postives = 106/210 (50.48%), Query Frame = 2
Query:  104 NNVQDSSTSETNLRLFSYNELKE---ATGGFKEELGRGSFGIVYKGVLKSASGKAIAVK-----KLDRLAQEREREFKSEVSAIGRTHHKNLVQLLG-FCDEALNRLLVYEFMGNGTLANLI-FAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILL----DNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 691
            NN+ +S T++    ++   ++K+       F +ELG G+F +VY+GV K+ +GK +A+K     K++    + + +   E+  +   +H+N+V++   F  +      + E    G L N I F  P  + N    I  +I   + YLH +    I H D+KP+NIL     D+Y   KI+DFGL++ +   +      + G+  YVAPE
Sbjct:  155 NNLNNSGTAQY---IWERKDIKDDILKDYDFIKELGSGNFSVVYEGVNKN-TGKRVAIKHLNLSKINTHTPKFKSQLNREIEILKFINHENVVEIYDIFYTKDQQLFFILELANGGELYNKIGFNEPLLNENQSKFIFKQILNAVSYLHSK---GIAHRDLKPENILFDSYGDDYLKIKITDFGLARFI--HEGELAKTLCGSPLYVAPE 355          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: FER_CANFA (Proto-oncogene tyrosine-protein kinase Fer OS=Canis familiaris GN=FER PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12
Identity = 49/146 (33.56%), Postives = 78/146 (53.42%), Query Frame = 2
Query:  191 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR--VRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK 622
            E LG+G+FG VYKG+LK  +  A+   K D L QE + +F  E   + +  H N+V+L+G C +     ++ E +  G   + +    K +  L+  V+ SL+ A G+ YL  +     IH D+  +N L+      KISDFG+S+
Sbjct:  567 ELLGKGNFGEVYKGILKDKTAVAVKTCKED-LPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPIYIIMELVPGGDFLSFL-RKKKDEIKLKQLVKFSLDAASGMSYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSR 707          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: EPHA3_MOUSE (Ephrin type-A receptor 3 OS=Mus musculus GN=Epha3 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12
Identity = 57/183 (31.15%), Postives = 93/183 (50.82%), Query Frame = 2
Query:  161 ELKEATGGFKEELGRGSFGIVYKGVLKSASGK--AIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR----VRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAP 688
            EL        + +G G FG V  G LK  S K  ++A+K L     +++ R+F  E S +G+  H N+++L G   ++   ++V E+M NG+L +    + K D        V +   IA G+ YL +   +  +H D+  +NIL+++    K+SDFGLS++L  D    +T    TRG   P
Sbjct:  615 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPEMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TRGGKIP 787          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: DKF1_CAEEL (Serine/threonine-protein kinase dkf-1 OS=Caenorhabditis elegans GN=dkf-1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12
Identity = 56/178 (31.46%), Postives = 89/178 (50.00%), Query Frame = 2
Query:  197 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERE----REFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVR--ISLEIARGLVYLHEECNVPIIHCDIKPQNILL----DNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQ 700
            LG G FG VY  + +  SGK +AVK + +    ++       ++EV+ + +T H  +V L   C+      +V E M NG +  +I +      N R    + ++I   L YLH++    I HCD+KP+N+LL     N+   KI DFG ++ +   Q R    + GT  Y+ PE +Q
Sbjct:  432 LGSGQFGTVYSAIQRH-SGKEVAVKVISKERFSKKGSGAESMRAEVAILQQTCHPGIVCLEFMCETKDKIFVVMEKM-NGDMLEMILSQELGRLNSRATKFLLVQILCALKYLHDQ---GIAHCDLKPENVLLSDMGSNFPQTKICDFGYARFIPESQFR--KTVVGTPAYLPPEVLQ 602          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: DKF1_CAEBR (Serine/threonine-protein kinase dkf-1 OS=Caenorhabditis briggsae GN=dkf-1 PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12
Identity = 56/178 (31.46%), Postives = 89/178 (50.00%), Query Frame = 2
Query:  197 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERE----REFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVR--ISLEIARGLVYLHEECNVPIIHCDIKPQNILL----DNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQ 700
            LG G FG VY  + +  SGK +AVK + +    ++       ++EV+ + +T H  +V L   C+      +V E M NG +  +I +      N R    + ++I   L YLH++    I HCD+KP+N+LL     N+   KI DFG ++ +   Q R    + GT  Y+ PE +Q
Sbjct:  470 LGSGQFGTVYSAIQRH-SGKEVAVKVISKERFSKKGSGAESMRAEVAILQQTCHPGIVCLEFMCETKDKIFVVMEKM-NGDMLEMILSQELGRLNSRATKFLLVQILCALKYLHDQ---GIAHCDLKPENVLLSDMGSNFPQTKICDFGYARFIPESQFR--KTVVGTPAYLPPEVLQ 640          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: ARKA_DICDI (Ankyrin repeat-containing protein kinase A OS=Dictyostelium discoideum GN=arkA PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12
Identity = 52/170 (30.59%), Postives = 80/170 (47.06%), Query Frame = 2
Query:  185 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 691
            + E++G G+ G V+KG+ +   G+ +A+K L     E  RE F  E   +       +V L G   E     LV E+  NG++ + I   P P W        ++  G+  LH+     ++H DIK  N L+++    K++DFGLS+        T    RGT  Y APE
Sbjct: 1114 YTEKIGSGASGKVFKGIYR---GRVVAIKVLKSADDEMTREDFLKEFGVLASLESHTIVGLYGVVLEP-KICLVMEYCSNGSIYHSIRKNP-PSWERFFSFVQQMLAGINALHQS-TPQVLHRDIKTLNFLVNHNNKVKVADFGLSRFNTESNQETLNKTRGTSVYCAPE 1277          
The following BLAST results are available for this feature:
BLAST of FC929873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
M313B_XENLA1.609e-1233.33Mitogen-activated protein kinase kinase kinase 13-... [more]
KCC1G_RAT1.609e-1229.13Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC1G_MOUSE1.609e-1229.13Calcium/calmodulin-dependent protein kinase type 1... [more]
IPL1_YARLI1.609e-1229.33Spindle assembly checkpoint kinase OS=Yarrowia lip... [more]
FHKA_DICDI1.609e-1229.05Probable serine/threonine-protein kinase fhkA OS=D... [more]
FER_CANFA1.609e-1233.56Proto-oncogene tyrosine-protein kinase Fer OS=Cani... [more]
EPHA3_MOUSE1.609e-1231.15Ephrin type-A receptor 3 OS=Mus musculus GN=Epha3 ... [more]
DKF1_CAEEL1.609e-1231.46Serine/threonine-protein kinase dkf-1 OS=Caenorhab... [more]
DKF1_CAEBR1.609e-1231.46Serine/threonine-protein kinase dkf-1 OS=Caenorhab... [more]
ARKA_DICDI1.609e-1230.59Ankyrin repeat-containing protein kinase A OS=Dict... [more]

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Properties
Property NameValue
Genbank descriptionC34001D03EF PostHarvC1 Citrus clementina cDNA clone C34001D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929873 ID=FC929873; Name=FC929873; organism=Citrus clementina; type=EST; length=723bp
ATTCTTATTAGGTCCTTTCCTGCGAGGAAGTTCTATATTCTGCAATGCCT
TTCTGCTGCTAGCAATACTTATCCTTTTAAAGTGGCGCAGGAGAAAGTAT
GAAAATAATGTCCAAGATTCAAGCACTTCCGAAACAAATCTGCGATTATT
TTCCTATAACGAACTTAAAGAAGCGACAGGCGGGTTCAAAGAAGAACTGG
GCCGGGGTTCTTTTGGCATAGTTTACAAAGGAGTCCTCAAATCTGCTTCA
GGAAAGGCTATAGCTGTCAAGAAACTGGACAGGTTAGCTCAAGAAAGGGA
ACGGGAATTCAAATCTGAAGTGAGTGCAATTGGGAGAACTCATCACAAGA
ATCTAGTCCAGTTACTTGGATTCTGTGATGAAGCTCTCAACCGGCTTTTA
GTATACGAATTCATGGGCAATGGCACTTTGGCAAACTTAATATTTGCAAT
TCCAAAGCCTGACTGGAATCTCCGAGTTCGGATTTCACTGGAAATTGCAA
GAGGGCTTGTGTACTTGCATGAAGAGTGCAATGTGCCCATCATTCACTGC
GATATAAAGCCTCAAAACATACTTCTAGATAACTATTTCAGCGCAAAAAT
TTCTGACTTTGGATTATCCAAGTTGTTACTCTCTGATCAGTCTCGAACAC
ATACCATGATCAGAGGAACTCGGGGATATGTGGCTCCAGAATGGGTTCAG
ATGCACCTATCTCAGCCAAAGTG
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