FC929873

Overview
NameFC929873
Unique NameFC929873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15224 contig Ccv1_Contig15224:435..1157. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.014e-35
Identity = 87/193 (45.08%), Postives = 119/193 (61.66%), Query Frame = 2
Query:  140 LRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKL-DRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAI----PKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWV 697
            L+ F++ EL+ AT  F E+  LG+G FG VYKGVL   +   +AVK+L D  +   +  F+ EV  I    H+NL++L+GFC     RLLVY FM N +LA+ +  I    P  DW  R RI+L  ARG  YLHE CN  IIH D+K  N+LLD  F A + DFGL+KL+   ++   T +RGT G++APE++
Sbjct:  275 LKRFAWRELQLATDNFSEKNVLGQGGFGKVYKGVLPDNT--KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSLAHRLREIKAGDPVLDWETRKRIALGAARGFEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRRTNVTTQVRGTMGHIAPEYL 465          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.014e-35
Identity = 81/206 (39.32%), Postives = 123/206 (59.71%), Query Frame = 2
Query:  104 NNVQDSSTSETNLRLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWVQ 700
            N+  +SS +   +R F+Y+E++E T  F + LG G FG+VY G +     + +AVK L + + +  + FK+EV  + R HH NLV L+G+CDE  +  L+YE+M NG L   +      F +    W  R++I L+ A GL YLH  C  P++H DIK  NILLD +  AK++DFGLS+   + ++    T++ GT GY+ PE+ Q
Sbjct:  553 NSQSESSFTSKKIR-FTYSEVQEMTNNFDKALGEGGFGVVYHGFVNVI--EQVAVKLLSQSSSQGYKHFKAEVELLMRVHHINLVSLVGYCDEGEHLALIYEYMPNGDLKQHLSGKHGGFVL---SWESRLKIVLDAALGLEYLHTGCVPPMVHRDIKTTNILLDQHLQAKLADFGLSRSFPIGNEKNVSTVVAGTPGYLDPEYYQ 752          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.014e-35
Identity = 81/215 (37.67%), Postives = 121/215 (56.28%), Query Frame = 2
Query:   86 RRRKYENNVQDSSTSETNLRLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPD---WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQMHLSQPK 721
            RRRK        S+ ++  R F+Y+++ + T  F+  +G+G FG+VY+G L +      A+K L   + +  +EFK+EV  + R HH+ LV L+G+CD+     L+YE MG G L   +   P      W +R++I+LE A G+ YLH  C   I+H D+K  NILL   F AKI+DFGLS+  L       T++ GT GY+ PE+ +  L   K
Sbjct:  529 RRRKPSAGKVTRSSFKSENRRFTYSDVNKMTNNFQVVIGKGGFGVVYQGCLNNEQA---AIKVLSHSSAQGYKEFKTEVELLLRVHHEKLVSLIGYCDDDNGLALIYELMGKGNLKEHLSGKPGCSVLSWPIRLKIALESAIGIEYLHTGCKPKIVHRDVKSTNILLSEEFEAKIADFGLSRSFLIGNEAQPTVVAGTFGYLDPEYHKTSLLSMK 740          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.014e-35
Identity = 81/207 (39.13%), Postives = 122/207 (58.94%), Query Frame = 2
Query:   89 RRKYENNVQDSSTSETNLRLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLL--SDQSRTHTMIRGTRGYVAPEW 694
            ++K  +  +     +T  + F+Y+E+ E T   +  LG G FG+VY G L  +  + +AVK L + + +  +EFK+EV  + R HH NLV L+G+CDE  +  L+YE+M NG L   +         +W  R++I++E A GL YLH  C   ++H D+K  NILLD  F AKI+DFGLS+      DQS+  T++ GT GY+ PE+
Sbjct:  536 KKKMSSRNKPEPWIKTKKKRFTYSEVMEMTKNLQRPLGEGGFGVVYHGDLNGS--EQVAVKLLSQTSAQGYKEFKAEVELLLRVHHINLVNLVGYCDEQDHFALIYEYMSNGDLHQHLSGKHGGSVLNWGTRLQIAIEAALGLEYLHTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQVSTVVAGTLGYLDPEY 740          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.014e-35
Identity = 90/205 (43.90%), Postives = 131/205 (63.90%), Query Frame = 2
Query:  128 SETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVL--------KSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIF---AIPKP-DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK-LLLSDQSRTHTMIRGTRGYVAPEWV 697
            S T ++ F++NELK AT  F+ +  +G G FG V+KG L        K  +G  IAVKKL++   +  RE+ +E++ +G+  H NLV+L+G+C E  +RLLVYEFM  G+L N +F   A  KP  W LRV ++L+ A+GL +LH +  V +I+ DIK  NILLD  ++AK+SDFGL++   + D S   T + GT GY APE++
Sbjct:   48 SSTPVKSFTFNELKLATRNFRPDSVIGEGGFGCVFKGWLDESTLTPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSD-PVKVIYRDIKASNILLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYM 251          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 3.937e-35
Identity = 88/207 (42.51%), Postives = 131/207 (63.29%), Query Frame = 2
Query:  104 NNVQDSSTSETNLRLFSYNELKEATGGFKE--ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEWVQMH 706
            + V D   +  +L+L  Y  ++ AT  F E  ++GRG FG VYKG    ++GK +AVK+L + +++ E EFK+EV  + +  H+NLV+LLGF  +   R+LVYE+M N +L  L+F   K    DW  R  I   IARG++YLH++  + IIH D+K  NILLD   + KI+DFG++++   DQ++ +T  I GT GY+APE+  MH
Sbjct:  327 SEVGDDMATADSLQL-DYRTIQTATNDFAESNKIGRGGFGEVYKGTF--SNGKEVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQTQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYA-MH 529          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.937e-35
Identity = 88/207 (42.51%), Postives = 131/207 (63.29%), Query Frame = 2
Query:  104 NNVQDSSTSETNLRLFSYNELKEATGGFKE--ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEWVQMH 706
            + V D   +  +L+L  Y  ++ AT  F E  ++GRG FG VYKG    ++GK +AVK+L + +++ E EFK+EV  + +  H+NLV+LLGF  +   R+LVYE+M N +L  L+F   K    DW  R  I   IARG++YLH++  + IIH D+K  NILLD   + KI+DFG++++   DQ++ +T  I GT GY+APE+  MH
Sbjct:  325 SEVGDDMATADSLQL-DYRTIQTATNDFAESNKIGRGGFGEVYKGTF--SNGKEVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQIQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYA-MH 527          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.142e-35
Identity = 81/203 (39.90%), Postives = 121/203 (59.61%), Query Frame = 2
Query:   98 YENNVQDSSTSETNLRLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAI---PKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEW 694
            Y N+ + S   E   R F+Y+E+ + T  F   +G G FG+V  G +  +  + +AVK L + + +  +EFK+EV  + R HH NLV L+G+CDE  +  L+YEF+ NG L   +      P  +W  R+RI+ E A GL YLH  C  P++H D+K  NILLD ++ AK++DFGLS+   +  +S   T+I GT GY+ PE+
Sbjct:  555 YANSPEPSI--EMKKRKFTYSEVTKMTNNFGRVVGEGGFGVVCHGTVNGS--EQVAVKLLSQSSTQGYKEFKAEVDLLLRVHHTNLVSLVGYCDEGDHLALIYEFVPNGDLRQHLSGKGGKPIVNWGTRLRIAAEAALGLEYLHIGCTPPMVHRDVKTTNILLDEHYKAKLADFGLSRSFPVGGESHVSTVIAGTPGYLDPEY 753          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 6.715e-35
Identity = 90/221 (40.72%), Postives = 132/221 (59.73%), Query Frame = 2
Query:   98 YENNVQDSSTSETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVL--------KSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIF---AIPKP-DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK-LLLSDQSRTHTMIRGTRGYVAPEWVQM-HLS 712
            Y    +       NL+ FS +ELK AT  F+ +  +G G FG V+KG +        K  +G  IAVK+L++   +  RE+ +E++ +G+  H NLV+L+G+C E  +RLLVYEFM  G+L N +F      +P  WN RVR++L  ARGL +LH      +I+ D K  NILLD+ ++AK+SDFGL++   + D S   T + GT+GY APE++   HLS
Sbjct:   39 YMPRTEGEILQNANLKNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLH-NAQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLS 258          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 8.770e-35
Identity = 90/228 (39.47%), Postives = 133/228 (58.33%), Query Frame = 2
Query:   80 KWRRRKYENN--------VQDSSTSETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERE-REFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAI---PKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQMHLSQPK 721
            K RR+ +E N        +  +  S  + ++F+   +KEAT G+ E   LG+G  G VYKG+L   +   +A+KK  RLA  R+  +F  EV  + + +H+N+V++LG C E    LLVYEF+ NGTL + +          W  R+RI++E+A  L YLH   ++PIIH DIK  NILLD   +AK++DFG SKL+  D+ +  TM++GT GY+ PE+    L   K
Sbjct:  372 KLRRQFFEQNGGGMLIQRLSGAGLSNIDFKIFTEEGMKEATNGYDESRILGQGGQGTVYKGILPDNT--IVAIKKA-RLADSRQVDQFIHEVLVLSQINHRNVVKILGCCLETEVPLLVYEFITNGTLFDHLHGSIFDSSLTWEHRLRIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASKLIPMDKEQLTTMVQGTLGYLDPEYYTTGLLNEK 596          
The following BLAST results are available for this feature:
BLAST of FC929873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5129_ARATH3.014e-3545.08Probable LRR receptor-like serine/threonine-protei... [more]
Y2899_ARATH3.014e-3539.32Probable leucine-rich repeat receptor-like protein... [more]
Y1755_ARATH3.014e-3537.67Probable LRR receptor-like serine/threonine-protei... [more]
MEE39_ARATH3.014e-3539.13Probable LRR receptor-like serine/threonine-protei... [more]
BIK1_ARATH3.014e-3543.90Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
CRK8_ARATH3.937e-3542.51Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
CRK6_ARATH3.937e-3542.51Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
Y5596_ARATH5.142e-3539.90Probable LRR receptor-like serine/threonine-protei... [more]
NAK_ARATH6.715e-3540.72Probable serine/threonine-protein kinase NAK OS=Ar... [more]
WAK3_ARATH8.770e-3539.47Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionC34001D03EF PostHarvC1 Citrus clementina cDNA clone C34001D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929873 ID=FC929873; Name=FC929873; organism=Citrus clementina; type=EST; length=723bp
ATTCTTATTAGGTCCTTTCCTGCGAGGAAGTTCTATATTCTGCAATGCCT
TTCTGCTGCTAGCAATACTTATCCTTTTAAAGTGGCGCAGGAGAAAGTAT
GAAAATAATGTCCAAGATTCAAGCACTTCCGAAACAAATCTGCGATTATT
TTCCTATAACGAACTTAAAGAAGCGACAGGCGGGTTCAAAGAAGAACTGG
GCCGGGGTTCTTTTGGCATAGTTTACAAAGGAGTCCTCAAATCTGCTTCA
GGAAAGGCTATAGCTGTCAAGAAACTGGACAGGTTAGCTCAAGAAAGGGA
ACGGGAATTCAAATCTGAAGTGAGTGCAATTGGGAGAACTCATCACAAGA
ATCTAGTCCAGTTACTTGGATTCTGTGATGAAGCTCTCAACCGGCTTTTA
GTATACGAATTCATGGGCAATGGCACTTTGGCAAACTTAATATTTGCAAT
TCCAAAGCCTGACTGGAATCTCCGAGTTCGGATTTCACTGGAAATTGCAA
GAGGGCTTGTGTACTTGCATGAAGAGTGCAATGTGCCCATCATTCACTGC
GATATAAAGCCTCAAAACATACTTCTAGATAACTATTTCAGCGCAAAAAT
TTCTGACTTTGGATTATCCAAGTTGTTACTCTCTGATCAGTCTCGAACAC
ATACCATGATCAGAGGAACTCGGGGATATGTGGCTCCAGAATGGGTTCAG
ATGCACCTATCTCAGCCAAAGTG
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