FC929873

Overview
NameFC929873
Unique NameFC929873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.145e-34
Identity = 86/215 (40.00%), Postives = 130/215 (60.47%), Query Frame = 2
Query:  107 NVQDSSTSETNL-RLFSYNELKEATGGFKEEL--GRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIF-----AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTH--TMIRGTRGYVAPEWVQMHLSQPK 721
            N + +S+  ++L R FS  E+K AT  F+E+L  G G FG VYKG +   +   +AVK+L+  + +  +EF +E+  + +  H +LV L+G+CD+    +LVYE+M +GTL + +F     + P   W  R+ I +  ARGL YLH      IIH DIK  NILLD  F AK+SDFGLS++  +  S+TH  T+++GT GY+ PE+ +  +   K
Sbjct:  498 NTKSASSLPSDLCRRFSIYEIKSATNDFEEKLIIGVGGFGSVYKGRIDGGA-TLVAVKRLEITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQILTEK 711          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.145e-34
Identity = 79/196 (40.31%), Postives = 119/196 (60.71%), Query Frame = 2
Query:  119 SSTSETNLRLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSD-QSRTHTMIRGTRGYVAPEW 694
            SS+  T  R F+Y+E+ + T  F+  LG+G FG VY G L       +AVK L   + +  +EFK+EV  + R HH++LV L+G+CD+  N  L+YE+M  G L   +    ++    W  R++I++E A+GL YLH  C  P++H D+KP NILL+    AK++DFGLS+    D +S   T++ GT GY+ PE+
Sbjct:  550 SSSIITKERKFTYSEVLKMTKNFERVLGKGGFGTVYHGNLDDTQ---VAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMEKGDLRENMSGKHSVNVLSWETRMQIAVEAAQGLEYLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVVAGTPGYLDPEY 742          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.145e-34
Identity = 85/203 (41.87%), Postives = 123/203 (60.59%), Query Frame = 2
Query:  128 SETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVL--------KSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIF--AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKL-LLSDQSRTHTMIRGTRGYVAPEWV 697
            S  NL+ F++NELK AT  F+++  LG G FG V+KG +        +  SG  +AVK+L     +  +E+ +EV+ +G+  H NLV L+G+C E  NRLLVYEFM  G+L N +F        W +R+++++  A+GL +LH E    +I+ D K  NILLD  F+AK+SDFGL+K     D +   T + GT GY APE+V
Sbjct:   67 SSPNLKAFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAVGAAKGLTFLH-EAKSQVIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYV 268          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.496e-34
Identity = 82/189 (43.39%), Postives = 117/189 (61.90%), Query Frame = 2
Query:  149 FSYNELKEATGGFK--EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP-----DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 694
            F+  ++K AT  F    ++G G FG V+KGVL  A G+ +AVK+L   +++  REF +E+ AI    H NLV+L GFC E    LL YE+M N +L++ +F+ PK      DW  R +I   IA+GL +LHEE  +  +H DIK  NILLD   + KISDFGL++L   +++   T + GT GY+APE+
Sbjct:  669 FTLRQIKFATDDFNPTNKIGEGGFGAVFKGVL--ADGRVVAVKQLSSKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFS-PKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISDFGLARLDEEEKTHISTKVAGTIGYMAPEY 854          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.954e-34
Identity = 84/213 (39.44%), Postives = 126/213 (59.15%), Query Frame = 2
Query:   92 RKYENNVQDSSTSETNL------RLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP-----DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK-LLLSDQSRTHTMIRGTRGYVAPEW 694
            R+  N  +D + ++  +      R+FS+ E+K AT  FKE +GRGSFG VY+G  K   GK +AVK      Q     F +EV  + +  H+NLV   GFC E   ++LVYE++  G+LA+ ++  P+      +W  R++++++ A+GL YLH      IIH D+K  NILLD   +AK+SDFGLSK    +D S   T+++GT GY+ PE+
Sbjct:  571 RRQRNKERDITRAQLKMQNWNASRIFSHKEIKSATRNFKEVIGRGSFGAVYRG--KLPDGKQVAVKVRFDRTQLGADSFINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYG-PRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHITTVVKGTAGYLDPEY 780          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.954e-34
Identity = 81/203 (39.90%), Postives = 124/203 (61.08%), Query Frame = 2
Query:  128 SETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAI---PKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQMHLSQPK 721
            S  ++++F+   +KEAT G+ E   LG+G  G VYKG+L+  S   +A+KK     + +  +F +EV  + + +H+N+V+LLG C E    LLVYEF+ +GTL + +          W  R+RI++E+A  L YLH   ++PIIH D+K  NILLD   +AK++DFG S+L+  DQ +  TM++GT GY+ PE+    L   K
Sbjct:  389 SNVDVKIFTEEGMKEATDGYNESRILGQGGQGTVYKGILQDNS--IVAIKKARLGDRSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHGSMFDSSLTWEHRLRIAIEVAGTLAYLHSYASIPIIHRDVKTANILLDENLTAKVADFGASRLIPMDQEQLTTMVQGTLGYLDPEYYNTGLLNEK 589          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.954e-34
Identity = 83/202 (41.09%), Postives = 120/202 (59.41%), Query Frame = 2
Query:  122 STSETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP------DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTMIRGTRGYVAPEWVQ 700
            +T E  LR  ++  L EAT GF  E  +G G FG VYK  L+   G  +A+KKL R+  + +REF +E+  IG+  H+NLV LLG+C     RLLVYE+M  G+L  ++            +W  R +I++  ARGL +LH  C   IIH D+K  N+LLD  F A++SDFG+++L+ + D   + + + GT GYV PE+ Q
Sbjct:  838 ATFEKPLRKLTFAHLLEATNGFSAETMVGSGGFGEVYKAQLRD--GSVVAIKKLIRITGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDEDFEARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQ 1037          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.552e-34
Identity = 78/194 (40.21%), Postives = 115/194 (59.28%), Query Frame = 2
Query:  131 ETNLRLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWVQ 700
            ET  R F+Y+E+ + T  F+  +G G FG+V  G +  +  + +AVK L + + +  + FK+EV  + R HH NLV L+G+CDE  +  L+YEF+  G L   +         +W  R+RI+LE A GL YLH  C  PI+H DIK  NILLD    AK++DFGLS+   +  ++   T++ GT GY+ PE+ Q
Sbjct:  563 ETKKRRFTYSEVIKMTNNFQRVVGEGGFGVVCHGTINGS--EQVAVKVLSQSSSQGYKHFKAEVDLLLRVHHTNLVSLVGYCDERDHLALIYEFLPKGDLRQHLSGKSGGSFINWGNRLRIALEAALGLEYLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGETHISTVVAGTPGYLDPEYYQ 754          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.552e-34
Identity = 82/200 (41.00%), Postives = 126/200 (63.00%), Query Frame = 2
Query:  113 QDSSTSETNLRLFSYNELKEATGGFKE--ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPD---WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEW 694
            +D  T+  +L+L  Y  ++ AT  F E  ++GRG FG VYKG    ++G  +AVK+L + +++ + EFK+EV  +    HKNLV++LGF  E   R+LVYE++ N +L N +F   K     W  R  I   IARG++YLH++  + IIH D+K  NILLD   + KI+DFG++++   DQ++ +T  I GT GY++PE+
Sbjct:  313 EDDKTTIESLQL-DYRAIQAATNDFSENNKIGRGGFGDVYKGTF--SNGTEVAVKRLSKTSEQGDTEFKNEVVVVANLRHKNLVRILGFSIEREERILVYEYVENKSLDNFLFDPAKKGQLYWTQRYHIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGMDQTQQNTSRIVGTYGYMSPEY 509          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.552e-34
Identity = 85/199 (42.71%), Postives = 126/199 (63.32%), Query Frame = 2
Query:  116 DSSTSETNLRLFSYNELKEATGGFKE--ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEW 694
            D  T+  +L+ F +  ++ AT  F E  +LG+G FG VYKG+  S  G  +AVK+L + + + EREF +EV  + +  H+NLV+LLGFC E   R+LVYEF+ N +L   IF        DW  R +I   IARG++YLH++  + IIH D+K  NILL +  +AKI+DFG++++   DQ+  +T  I GT GY++PE+
Sbjct:  329 DDITTAGSLQ-FDFKAIEAATNKFCETNKLGQGGFGEVYKGIFPS--GVQVAVKRLSKTSGQGEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFVPNKSLDYFIFDSTMQSLLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLGDDMNAKIADFGMARIFGMDQTEANTRRIVGTYGYMSPEY 524          
The following BLAST results are available for this feature:
BLAST of FC929873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5389_ARATH1.145e-3440.00Probable receptor-like protein kinase At5g38990 OS... [more]
Y5189_ARATH1.145e-3440.31Probable LRR receptor-like protein kinase At1g5189... [more]
APK2A_ARATH1.145e-3441.87Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
RKF1_ARATH1.496e-3443.39Probable LRR receptor-like serine/threonine-protei... [more]
Y5487_ARATH1.954e-3439.44Probable LRR receptor-like serine/threonine-protei... [more]
WAK5_ARATH1.954e-3439.90Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
BRL1_ARATH1.954e-3441.09Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
PAM74_ARATH2.552e-3440.21Probable LRR receptor-like serine/threonine-protei... [more]
CRK7_ARATH2.552e-3441.00Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
CRK4_ARATH2.552e-3442.71Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionC34001D03EF PostHarvC1 Citrus clementina cDNA clone C34001D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929873 ID=FC929873; Name=FC929873; organism=Citrus clementina; type=EST; length=723bp
ATTCTTATTAGGTCCTTTCCTGCGAGGAAGTTCTATATTCTGCAATGCCT
TTCTGCTGCTAGCAATACTTATCCTTTTAAAGTGGCGCAGGAGAAAGTAT
GAAAATAATGTCCAAGATTCAAGCACTTCCGAAACAAATCTGCGATTATT
TTCCTATAACGAACTTAAAGAAGCGACAGGCGGGTTCAAAGAAGAACTGG
GCCGGGGTTCTTTTGGCATAGTTTACAAAGGAGTCCTCAAATCTGCTTCA
GGAAAGGCTATAGCTGTCAAGAAACTGGACAGGTTAGCTCAAGAAAGGGA
ACGGGAATTCAAATCTGAAGTGAGTGCAATTGGGAGAACTCATCACAAGA
ATCTAGTCCAGTTACTTGGATTCTGTGATGAAGCTCTCAACCGGCTTTTA
GTATACGAATTCATGGGCAATGGCACTTTGGCAAACTTAATATTTGCAAT
TCCAAAGCCTGACTGGAATCTCCGAGTTCGGATTTCACTGGAAATTGCAA
GAGGGCTTGTGTACTTGCATGAAGAGTGCAATGTGCCCATCATTCACTGC
GATATAAAGCCTCAAAACATACTTCTAGATAACTATTTCAGCGCAAAAAT
TTCTGACTTTGGATTATCCAAGTTGTTACTCTCTGATCAGTCTCGAACAC
ATACCATGATCAGAGGAACTCGGGGATATGTGGCTCCAGAATGGGTTCAG
ATGCACCTATCTCAGCCAAAGTG
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