FC929873

Overview
NameFC929873
Unique NameFC929873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15224 contig Ccv1_Contig15224:435..1157. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.353e-34
Identity = 77/210 (36.67%), Postives = 122/210 (58.10%), Query Frame = 2
Query:   92 RKYENNVQDSSTSETN------LRLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPK--PDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK-LLLSDQSRTHTMIRGTRGYVAPEW 694
            R+++   Q  +  E N       R F Y+E+   T  F+  +G+G FG VY GV+   +G+ +AVK L   + +  +EF++EV  + R HH NL  L+G+C+E  + +L+YE+M N  L + +         W  R++ISL+ A+GL YLH  C  PI+H D+KP NILL+    AK++DFGLS+   +    +  T++ G+ GY+ PE+
Sbjct:  539 RRFKKKQQRGTLGERNGPLKTAKRYFKYSEVVNITNNFERVIGKGGFGKVYHGVI---NGEQVAVKVLSEESAQGYKEFRAEVDLLMRVHHTNLTSLVGYCNEINHMVLIYEYMANENLGDYLAGKRSFILSWEERLKISLDAAQGLEYLHNGCKPPIVHRDVKPTNILLNEKLQAKMADFGLSRSFSVEGSGQISTVVAGSIGYLDPEY 745          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.353e-34
Identity = 81/197 (41.12%), Postives = 120/197 (60.91%), Query Frame = 2
Query:  131 ETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP----DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTMIRGTRGYVAPEWVQ 700
            E  LR  ++ +L EAT GF  +  +G G FG VYK  LK   G  +A+KKL  ++ + +REF +E+  IG+  H+NLV LLG+C     RLLVYE+M  G+L +++    K     +W  R +I++  ARGL +LH  C   IIH D+K  N+LLD    A++SDFG+++L+ + D   + + + GT GYV PE+ Q
Sbjct:  870 EKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKD--GSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKTGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQ 1064          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.685e-34
Identity = 84/202 (41.58%), Postives = 125/202 (61.88%), Query Frame = 2
Query:  137 NLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSAS--------GKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFA----IPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK-LLLSDQSRTHTMIRGTRGYVAPEWV 697
            NL+ FS+ ELK AT  F+ +  LG G FG V+KG +   S        G  IAVKKL++   +  +E+ +EV+ +G+  H++LV+L+G+C E  +RLLVYEFM  G+L N +F          W LR++++L  A+GL +LH      +I+ D K  NILLD+ ++AK+SDFGL+K   + D+S   T + GT GY APE++
Sbjct:   52 NLKSFSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLHSS-ETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYL 252          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.425e-34
Identity = 82/202 (40.59%), Postives = 122/202 (60.40%), Query Frame = 2
Query:  143 RLFSYNELKEATGGFKEEL--GRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIF-----AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTH--TMIRGTRGYVAPEWVQMHLSQPK 721
            R FS  E+K AT  F+++L  G G FG VYKG +   +   +AVK+L+  + +  +EF++E+  + +  H +LV L+G+CDE    +LVYE+M +GTL + +F     + P   W  R+ I +  ARGL YLH      IIH DIK  NILLD  F  K+SDFGLS++  +  S+TH  T+++GT GY+ PE+ +  +   K
Sbjct:  504 RRFSIFEIKSATNDFEDKLIIGVGGFGSVYKGQIDGGA-TLVAVKRLEITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQVLTEK 704          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 7.425e-34
Identity = 82/202 (40.59%), Postives = 125/202 (61.88%), Query Frame = 2
Query:  113 QDSSTSETNL---RLFSYNELKEATGGF--KEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 694
            Q ++T++ N+   RLFS  ELK+AT  F  K  LG+GS G VYKG++    GK IAVK+   + +++  +F +E+  + + +H+N+V+L+G C E    +LVYE++ NG +   +          W +R+RI++EIA  L Y+H   + PI H DIK  NILLD  + AK+SDFG S+ +  DQ+   TM+ GT GY+ PE+
Sbjct:  405 QLTTTNDGNVDMSRLFSSEELKKATDNFSVKRVLGKGSQGTVYKGMM--VDGKIIAVKRSKVVDEDKLEKFINEIILLSQINHRNIVKLIGCCLETEVPILVYEYIPNGDMFKRLHDESDDYAMTWEVRLRIAIEIAGALTYMHSAASFPIYHRDIKTTNILLDEKYGAKVSDFGTSRSVTIDQTHLTTMVAGTFGYMDPEY 604          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.425e-34
Identity = 81/197 (41.12%), Postives = 120/197 (60.91%), Query Frame = 2
Query:  131 ETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP----KPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTMIRGTRGYVAPEWVQ 700
            E  LR  ++ +L EAT GF  +  +G G FG VYK  LK   G  +A+KKL  ++ + +REF +E+  IG+  H+NLV LLG+C     RLLVYE+M  G+L +++        K +W  R +I++  ARGL +LH  C   IIH D+K  N+LLD    A++SDFG+++L+ + D   + + + GT GYV PE+ Q
Sbjct:  870 EKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKD--GSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKIGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQ 1064          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.425e-34
Identity = 79/163 (48.47%), Postives = 109/163 (66.87%), Query Frame = 2
Query:  143 RLFSYNELKEATGGFKE--ELGRGSFGIVYKGVLKSASGKAIAVKKLD--RLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFA-IPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGL 616
            ++F  +ELK+AT GFKE  ELGRGSFG VYK VL  + G  +AVK+ +   +     R F+SE+  + +  H N+V LLG+C E   RLLVYE+M +GTL + +   + + DW++R++I L+ ARGL YLH E + PIIH D+K  NILLD    A+I+DFGL
Sbjct:  505 KIFRLSELKDATHGFKEFNELGRGSFGFVYKAVL--SDGIHVAVKRANAATIIHSNNRGFESELEILCKIRHNNIVNLLGYCSEMGERLLVYEYMPHGTLHDHLHGDLSQLDWSMRLKIMLQAARGLDYLHNEVDPPIIHRDVKTSNILLDGEMCARIADFGL 665          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.697e-34
Identity = 85/206 (41.26%), Postives = 124/206 (60.19%), Query Frame = 2
Query:  101 ENNVQDSSTSETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPD----WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQ 700
            E N ++    +T  R+F+  EL++AT  F E   LG G  G VYKG+L    G+ +AVKK   + +++ +EF +EV  + + +H+++V+LLG C E    +LVYEF+ NG L   I      D    W +R+RI+++IA  L YLH   + PI H DIK  NILLD  + AK++DFG S+ +  DQ+   T+I GT GYV PE+ Q
Sbjct:  427 ELNTREGYVEKT--RVFNSRELEKATENFSENRVLGHGGQGTVYKGML--VDGRTVAVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPMLVYEFIINGNLFKHIHEEESDDYTMLWGMRLRIAVDIAGALSYLHSSASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEYYQ 628          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 9.697e-34
Identity = 78/188 (41.49%), Postives = 122/188 (64.89%), Query Frame = 2
Query:  149 FSYNELKEATGGFK--EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP---KPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEW 694
            F +  ++ AT  F    +LG+G FG VYKG L  +SG  +AVK+L + + + E+EF++EV  + +  H+NLV+LLG+C E   ++LVYEF+ N +L + +F      K DW  R +I   IARG++YLH++  + IIH D+K  NILLD+  + KI+DFG++++   DQ+   T  + GT GY++PE+
Sbjct:  314 FDFKAIEAATNCFLPINKLGQGGFGEVYKGTL--SSGLQVAVKRLSKTSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFDSTMKMKLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDDDMNPKIADFGMARIFGMDQTEAMTRRVVGTYGYMSPEY 499          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 9.697e-34
Identity = 84/203 (41.38%), Postives = 128/203 (63.05%), Query Frame = 2
Query:  116 DSSTSETNLRLFSYNELKEATGGFKE--ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEWVQMH 706
            D  T+  +L+L  Y  ++ AT  F E  ++G+G FG VYKG L  + G  +AVK+L + + + E EFK+EV  + +  H+NLV+LLGFC +   R+LVYE++ N +L   +F   K    DW  R +I   +ARG++YLH++  + IIH D+K  NILLD   + KI+DFG++++   DQ+  +T  I GT GY++PE+  MH
Sbjct:  315 DDITTADSLQL-DYRTIQTATDDFVESNKIGQGGFGEVYKGTL--SDGTEVAVKRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLFDPAKKGQLDWTRRYKIIGGVARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGLDQTEENTSRIVGTYGYMSPEYA-MH 513          
The following BLAST results are available for this feature:
BLAST of FC929873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SIRK_ARATH4.353e-3436.67Senescence-induced receptor-like serine/threonine-... [more]
BRI1_SOLPE4.353e-3441.12Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
APK1A_ARATH5.685e-3441.58Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
Y5900_ARATH7.425e-3440.59Putative receptor-like protein kinase At5g39000 OS... [more]
WAKLE_ARATH7.425e-3440.59Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
BRI1_SOLLC7.425e-3441.12Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
ACCR2_ARATH7.425e-3448.47Serine/threonine-protein kinase-like protein CCR2 ... [more]
WAKLN_ARATH9.697e-3441.26Wall-associated receptor kinase-like 18 OS=Arabido... [more]
CRK19_ARATH9.697e-3441.49Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CRK10_ARATH9.697e-3441.38Cysteine-rich receptor-like protein kinase 10 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC34001D03EF PostHarvC1 Citrus clementina cDNA clone C34001D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929873 ID=FC929873; Name=FC929873; organism=Citrus clementina; type=EST; length=723bp
ATTCTTATTAGGTCCTTTCCTGCGAGGAAGTTCTATATTCTGCAATGCCT
TTCTGCTGCTAGCAATACTTATCCTTTTAAAGTGGCGCAGGAGAAAGTAT
GAAAATAATGTCCAAGATTCAAGCACTTCCGAAACAAATCTGCGATTATT
TTCCTATAACGAACTTAAAGAAGCGACAGGCGGGTTCAAAGAAGAACTGG
GCCGGGGTTCTTTTGGCATAGTTTACAAAGGAGTCCTCAAATCTGCTTCA
GGAAAGGCTATAGCTGTCAAGAAACTGGACAGGTTAGCTCAAGAAAGGGA
ACGGGAATTCAAATCTGAAGTGAGTGCAATTGGGAGAACTCATCACAAGA
ATCTAGTCCAGTTACTTGGATTCTGTGATGAAGCTCTCAACCGGCTTTTA
GTATACGAATTCATGGGCAATGGCACTTTGGCAAACTTAATATTTGCAAT
TCCAAAGCCTGACTGGAATCTCCGAGTTCGGATTTCACTGGAAATTGCAA
GAGGGCTTGTGTACTTGCATGAAGAGTGCAATGTGCCCATCATTCACTGC
GATATAAAGCCTCAAAACATACTTCTAGATAACTATTTCAGCGCAAAAAT
TTCTGACTTTGGATTATCCAAGTTGTTACTCTCTGATCAGTCTCGAACAC
ATACCATGATCAGAGGAACTCGGGGATATGTGGCTCCAGAATGGGTTCAG
ATGCACCTATCTCAGCCAAAGTG
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