FC929873

Overview
NameFC929873
Unique NameFC929873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15224 contig Ccv1_Contig15224:435..1157. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.697e-34
Identity = 85/211 (40.28%), Postives = 128/211 (60.66%), Query Frame = 2
Query:  149 FSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLA-----QEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPD--------WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLS---KLLLSDQS--RTHTMIRGTRGYVAPEWVQMHLSQPK 721
            FS++EL  ATG F  E  +G GSFG+VY+G L    G+ +A+K+ +  A     QE+E  F SE++ + R HHK+LV+L+G+C+E   +LLVY++M NG L + +      +        W +R++I+L+ ARG+ YLH     PIIH DIK  NILLD+ + A++SDFGLS    +L  D +  +  T   GT GY+ PE+  +++   K
Sbjct:  484 FSFSELASATGNFSLENKIGSGSFGVVYRGKLND--GREVAIKRGEVNAKMKKFQEKETAFDSEIAFLSRLHHKHLVRLVGYCEEREEKLLVYDYMKNGALYDHLHDKNNVEKHSSLINSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDSNWVARVSDFGLSLMGPVLGKDHNPYQRPTKAAGTVGYIDPEYYSLNVLTDK 692          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.266e-33
Identity = 81/197 (41.12%), Postives = 120/197 (60.91%), Query Frame = 2
Query:  122 STSETNL-RLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFA--IPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTMIRGTRGYVAPEW 694
            S + T+L R F + E+ +AT  F E   LG G FG VYKG L+   G  +AVK+ +  +++   EF++E+  + +  H++LV L+G+CDE    +LVYE+M NG L + ++   +P   W  R+ I +  ARGL YLH   +  IIH D+K  NILLD    AK++DFGLSK   S DQ+   T ++G+ GY+ PE+
Sbjct:  488 SLASTHLGRCFMFQEIMDATNKFDESSLLGVGGFGRVYKGTLED--GTKVAVKRGNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEY 682          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 143.28 bits (360), Expect = 1.266e-33
Identity = 82/205 (40.00%), Postives = 124/205 (60.49%), Query Frame = 2
Query:  131 ETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIF------AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQMHLSQPK 721
            ++N +  SY++L ++T  F +   +G G FG+VYK  L    GK +A+KKL     + EREF++EV  + R  H NLV L GFC    +RLL+Y +M NG+L   +       A+ K  W  R+RI+   A+GL+YLHE C+  I+H DIK  NILLD  F++ ++DFGL++L+   ++   T + GT GY+ PE+ Q  ++  K
Sbjct:  716 QSNDKELSYDDLLDSTNSFDQANIIGCGGFGMVYKATLPD--GKKVAIKKLSGDCGQIEREFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHERNDGPALLK--WKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVSTDLVGTLGYIPPEYGQASVATYK 916          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.266e-33
Identity = 76/190 (40.00%), Postives = 118/190 (62.11%), Query Frame = 2
Query:  143 RLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPD-----WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 691
            R   Y +L  AT GFK+   +G G FG V+KG L ++    IAVKK+   +++  REF +E+ ++G+  HKNLV L G+C    + LL+Y+++ NG+L +L++ +P+       WN R +I+  IA GL+YLHEE    +IH D+KP N+L+D+  + ++ DFGL++L         T + GT GY+APE
Sbjct:  353 RRLRYRDLYVATDGFKKTGIIGTGGFGTVFKGKLPNSD--PIAVKKIIPSSRQGVREFVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYERGTLSETTALVGTIGYMAPE 540          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.266e-33
Identity = 84/199 (42.21%), Postives = 126/199 (63.32%), Query Frame = 2
Query:  137 NLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSA--------SGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP-DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQ-SRTHTMIRGTRGYVAPEWV 697
            NL+++++ +LK AT  FK +  LG+G FG VY+G + +         SG  +A+K+L+  + +   E++SEV+ +G   H+NLV+LLG+C E    LLVYEFM  G+L + +F    P  W+LR++I +  ARGL +LH      +I+ D K  NILLD+ + AK+SDFGL+KL  +D+ S   T I GT GY APE++
Sbjct:   70 NLKVYNFLDLKTATKNFKPDSMLGQGGFGKVYRGWVDATTLAPSRVGSGMIVAIKRLNSESVQGFAEWRSEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLESHLFRRNDPFPWDLRIKIVIGAARGLAFLH-SLQREVIYRDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYM 267          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.266e-33
Identity = 87/205 (42.44%), Postives = 120/205 (58.54%), Query Frame = 2
Query:  116 DSSTSETNLRLFSYNELKEATGGFKE--ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL------LSDQSRTHTMIRGTRGYVAPEWV 697
            +S  +E++L  F Y+ LK+AT  F E  +LG G +G V+KG L  + G+ IA+K+L    ++   E  +E+  I R  HKNLV+LLG C   +N  +VYEF+ N +L +++F   K    DW  R  I L  A GL YLHE C   IIH DIK  NILLD  +  KISDFGL+K        +   S + + I GT GY+APE++
Sbjct:  308 ESICTESHLMSFEYSTLKKATNNFNESCKLGVGGYGEVFKGTL--SDGREIAIKRLHVSGKKPRDEIHNEIDVISRCQHKNLVRLLGCCFTNMNSFIVYEFLANTSLDHILFNPEKKKELDWKKRRTIILGTAEGLEYLHETCK--IIHRDIKASNILLDLKYKPKISDFGLAKFYPEGGKDIPASSLSPSSIAGTLGYMAPEYI 508          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.266e-33
Identity = 84/188 (44.68%), Postives = 117/188 (62.23%), Query Frame = 2
Query:  149 FSYNELKEATGGF--KEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFA---IPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWV 697
            FSY  L+ AT  F  K +LG+G  G VYKGVL   +GK +AVK+L    ++    F +EV+ I +  HKNLV+LLG        LLVYE++ N +L + +F    +   +W  R +I L  A G+ YLHEE N+ IIH DIK  NILL++ F+ +I+DFGL++L   D++   T I GT GY+APE+V
Sbjct:  311 FSYENLERATDYFSDKNKLGQGGSGSVYKGVL--TNGKTVAVKRLFFNTKQWVDHFFNEVNLISQVDHKNLVKLLGCSITGPESLLVYEYIANQSLHDYLFVRKDVQPLNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPEDKTHISTAIAGTLGYMAPEYV 496          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.266e-33
Identity = 85/202 (42.08%), Postives = 124/202 (61.39%), Query Frame = 2
Query:  137 NLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVL--------KSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFA----IPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK-LLLSDQSRTHTMIRGTRGYVAPEWV 697
            NL+ F++ ELK AT  F+ +  LG G FG V+KG +        K  +G  IAVKKL++   +  +E+ +EV+ +G+  H NLV+L+G+C E  +RLLVYEFM  G+L N +F          W LR++++L  A+GL +LH      +I+ D K  NILLD+ ++AK+SDFGL+K     D+S   T I GT GY APE++
Sbjct:   53 NLKSFTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWTLRLKVALGAAKGLAFLH-NAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYL 253          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: WAK2_ARATH (Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.654e-33
Identity = 80/209 (38.28%), Postives = 124/209 (59.33%), Query Frame = 2
Query:  110 VQDSSTSETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAI---PKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQMHLSQPK 721
            V  +  S  ++++F+   +KEAT G+ E   LG+G  G VYKG+L   S   +A+KK     + +  +F +EV  + + +H+N+V++LG C E    LLVYEF+ +GTL + +          W  R+RI+ E+A  L YLH   ++PIIH DIK  NILLD   +AK++DFG S+L+  D+ +  T+++GT GY+ PE+    L   K
Sbjct:  379 VSGAGPSNVDVKIFTEKGMKEATNGYHESRILGQGGQGTVYKGILPDNS--IVAIKKARLGNRSQVEQFINEVLVLSQINHRNVVKVLGCCLETEVPLLVYEFINSGTLFDHLHGSLYDSSLTWEHRLRIATEVAGSLAYLHSSASIPIIHRDIKTANILLDKNLTAKVADFGASRLIPMDKEQLTTIVQGTLGYLDPEYYNTGLLNEK 585          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.654e-33
Identity = 84/227 (37.00%), Postives = 130/227 (57.27%), Query Frame = 2
Query:   80 KWRRRKYENN--------VQDSSTSETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAI---PKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQMHLSQPK 721
            K R + +E N        +  +  S  ++++F+ + +K+AT G+ E   LG+G  G VYKG+L   S   +A+KK       +  +F +EV  + + +H+N+V+LLG C E    LLVYEF+ NGTL + +          W  R++I++E+A  L YLH   ++PIIH DIK  NILLD   +AK++DFG S+L+  D+    TM++GT GY+ PE+    L   K
Sbjct:  366 KLREQFFEQNGGGMLTQRLSGAGPSNVDVKIFTEDGMKKATNGYAESRILGQGGQGTVYKGILPDNS--IVAIKKARLGDSSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITNGTLFDHLHGSMIDSSLTWEHRLKIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDVNLTAKVADFGASRLIPMDKEELETMVQGTLGYLDPEYYNTGLLNEK 590          
The following BLAST results are available for this feature:
BLAST of FC929873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ACCR3_ARATH9.697e-3440.28Putative serine/threonine-protein kinase-like prot... [more]
THE1_ARATH1.266e-3341.12Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
PSKR1_ARATH1.266e-3340.00Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
LRKA1_ARATH1.266e-3340.00Lectin-domain containing receptor kinase A4.1 OS=A... [more]
CX32_ARATH1.266e-3342.21Probable serine/threonine-protein kinase Cx32, chl... [more]
CRK43_ARATH1.266e-3342.44Putative cysteine-rich receptor-like protein kinas... [more]
CRK3_ARATH1.266e-3344.68Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
APK1B_ARATH1.266e-3342.08Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
WAK2_ARATH1.654e-3338.28Wall-associated receptor kinase 2 OS=Arabidopsis t... [more]
WAK1_ARATH1.654e-3337.00Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionC34001D03EF PostHarvC1 Citrus clementina cDNA clone C34001D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929873 ID=FC929873; Name=FC929873; organism=Citrus clementina; type=EST; length=723bp
ATTCTTATTAGGTCCTTTCCTGCGAGGAAGTTCTATATTCTGCAATGCCT
TTCTGCTGCTAGCAATACTTATCCTTTTAAAGTGGCGCAGGAGAAAGTAT
GAAAATAATGTCCAAGATTCAAGCACTTCCGAAACAAATCTGCGATTATT
TTCCTATAACGAACTTAAAGAAGCGACAGGCGGGTTCAAAGAAGAACTGG
GCCGGGGTTCTTTTGGCATAGTTTACAAAGGAGTCCTCAAATCTGCTTCA
GGAAAGGCTATAGCTGTCAAGAAACTGGACAGGTTAGCTCAAGAAAGGGA
ACGGGAATTCAAATCTGAAGTGAGTGCAATTGGGAGAACTCATCACAAGA
ATCTAGTCCAGTTACTTGGATTCTGTGATGAAGCTCTCAACCGGCTTTTA
GTATACGAATTCATGGGCAATGGCACTTTGGCAAACTTAATATTTGCAAT
TCCAAAGCCTGACTGGAATCTCCGAGTTCGGATTTCACTGGAAATTGCAA
GAGGGCTTGTGTACTTGCATGAAGAGTGCAATGTGCCCATCATTCACTGC
GATATAAAGCCTCAAAACATACTTCTAGATAACTATTTCAGCGCAAAAAT
TTCTGACTTTGGATTATCCAAGTTGTTACTCTCTGATCAGTCTCGAACAC
ATACCATGATCAGAGGAACTCGGGGATATGTGGCTCCAGAATGGGTTCAG
ATGCACCTATCTCAGCCAAAGTG
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