FC929873

Overview
NameFC929873
Unique NameFC929873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.654e-33
Identity = 82/206 (39.81%), Postives = 124/206 (60.19%), Query Frame = 2
Query:   95 KYENNVQDSS-TSETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFA--IPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTMIRGTRGYVAPEW 694
            KY N    +S T+  N R+  +  +K+AT  F E   +G G FG VYKG L    G  +AVK+ +  +Q+   EF++E+  + +  H++LV L+G+CDE    +L+YE+M NGT+ + ++   +P   W  R+ I +  ARGL YLH   + P+IH D+K  NILLD  F AK++DFGLSK     DQ+   T ++G+ GY+ PE+
Sbjct:  455 KYSNGTTLTSITTNANYRI-PFAAVKDATNNFDESRNIGVGGFGKVYKGELND--GTKVAVKRGNPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVKSHLYGSGLPSLTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEY 657          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.654e-33
Identity = 81/200 (40.50%), Postives = 124/200 (62.00%), Query Frame = 2
Query:  113 QDSSTSETNLRLFSYNELKEATGGFKE--ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEW 694
            +D  TS   L+ F ++ ++ AT  F E  +LG G FG VYKG L   +G+ +A+K+L + + +   EFK+EV  + +  H+NL +LLG+C +   ++LVYEF+ N +L   +F   K    DW  R +I   IARG++YLH +  + IIH D+K  NILLD     KISDFG++++   DQ++ +T  I GT GY++PE+
Sbjct:  324 EDGITSTETLQ-FQFSAIEAATNKFSESNKLGHGGFGEVYKGQL--ITGETVAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLFDNEKRRVLDWQRRYKIIEGIARGILYLHRDSRLTIIHRDLKASNILLDADMHPKISDFGMARIFGVDQTQANTKRIVGTYGYMSPEY 520          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.654e-33
Identity = 81/199 (40.70%), Postives = 125/199 (62.81%), Query Frame = 2
Query:  116 DSSTSETNLRLFSYNELKEATGGFK--EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP---KPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEW 694
            DS T+  +L+ F +  +  AT  F    +LG+G FG VYKG   S  G  +AVK+L + + + EREF++EV  + +  H+NLV+LLG+C E   ++LVYEF+ N +L   +F      + DW  R +I   IARG++YLH++  + IIH D+K  NILLD   + K++DFG++++   DQ+  +T  + GT GY+APE+
Sbjct:  486 DSITTAGSLQ-FDFKAIVAATNNFLPINKLGQGGFGEVYKGTFPS--GVQVAVKRLSKTSGQGEREFENEVVVVAKLQHRNLVRLLGYCLEGEEKILVYEFVHNKSLDYFLFDTTMKRQLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEY 681          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.160e-33
Identity = 76/196 (38.78%), Postives = 115/196 (58.67%), Query Frame = 2
Query:  131 ETNLRLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK-LLLSDQSRTHTMIRGTRGYVAPEWVQMH 706
            E   R  +Y+E+   T  F+  +G G FG+VY G L  +  + +AVK L   + +  +EFK+EV  + R HH NLV L+G+CDE  +  L+YE+M NG L + +          W  R+ I++E A GL YLH  C   ++H D+K  NILLD +F AK++DFGLS+   + ++S   T + GT GY+ PE+ + +
Sbjct:  557 ENKKRRITYSEILLMTNNFERVIGEGGFGVVYHGYLNDS--EQVAVKVLSPSSSQGYKEFKAEVELLLRVHHINLVSLVGYCDEQAHLALIYEYMANGDLKSHLSGKHGDCVLKWENRLSIAVETALGLEYLHSGCKPLMVHRDVKSMNILLDEHFQAKLADFGLSRSFSVGEESHVSTGVVGTPGYLDPEYYRTY 750          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.160e-33
Identity = 82/211 (38.86%), Postives = 128/211 (60.66%), Query Frame = 2
Query:   86 RRRKYEN-NVQDSSTSETNLRLFSYNELKEATGGFKE--ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEWV 697
            RR+ Y+  ++  S  +  + +   +  ++ AT  F +  +LG+G FG VYKG L   +G  +AVK+L + +++  +EFK+EV  + +  H+NLV+LLG+C E   ++LVYEF+ N +L   +F   K    DW  R  I   I RG++YLH++  + IIH D+K  NILLD     KI+DFG++++   DQS  +T  I GT GY+ PE+V
Sbjct:  333 RRKSYQEIDLDQSGITTLHFQQLDFKTIEVATENFAKTNKLGQGGFGEVYKGTL--VNGTEVAVKRLSKTSEQGAQEFKNEVVLVAKLQHRNLVKLLGYCLEPEEKILVYEFVPNKSLDYFLFDPTKQGQLDWTKRYNIIGGITRGILYLHQDSRLTIIHRDLKASNILLDADMIPKIADFGMARISGIDQSVANTKRIAGTFGYMPPEYV 541          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.821e-33
Identity = 78/201 (38.81%), Postives = 120/201 (59.70%), Query Frame = 2
Query:  116 DSSTSE----TNLRLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEW 694
            DS +SE    T  + F+Y E+   T  F++ LG+G FGIVY G +     + +AVK L   + +  ++FK+EV  + R HHKNLV L+G+C+E     L+YE+M NG L   +         +W  R++I+LE A+GL YLH  C   ++H D+K  NILL+ +F  K++DFGLS+   +  ++   T++ GT GY+ PE+
Sbjct:  552 DSRSSEPTIVTKNKKFTYAEVLTMTNNFQKILGKGGFGIVYYGSVNGT--EQVAVKMLSHSSAQGYKQFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHMSGKRGGSILNWGTRLKIALEAAQGLEYLHNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGYLDPEY 750          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.821e-33
Identity = 86/212 (40.57%), Postives = 123/212 (58.02%), Query Frame = 2
Query:   80 KWRRRKYENNVQDSSTSETNLRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQ 700
            K +  + E NV+ S       R+FS +EL++AT  F +   LG+G  G VYKG+L    G+ +AVK+   + ++R  EF +EV  + + +H+N+V+LLG C E    +LVYEF+ NG L   +          W +R+ I++EIA  L YLH   + PI H DIK  NILLD    AK+SDFG S+ +  DQ+   T + GT GYV PE+ Q
Sbjct:  388 KQQLARKEGNVEMS-------RIFSSHELEKATDNFNKNRVLGQGGQGTVYKGML--VDGRIVAVKRSKAVDEDRVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLHDESDDYTMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDERNRAKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQ 590          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.821e-33
Identity = 88/216 (40.74%), Postives = 129/216 (59.72%), Query Frame = 2
Query:   83 WRRRK----YENNVQDSSTSETNLRLFSYNELKEATGGFKE--ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP----DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEWV 697
            W+RR+     + +  D  TS  +L+ F +  ++ AT  F    +LG+G FG VYKG+L + +   IAVK+L   + +  +EFK+EV  + +  HKNLV+LLGFC E   ++LVYEF+ N +L   +F  PK     DW  R  I   + RGL+YLH++  + IIH DIK  NILLD   + KI+DFG+++    DQ+   T  + GT GY+ PE+V
Sbjct:  302 WKRRQSYKTLKYHTDDDMTSPQSLQ-FDFTTIEVATDNFSRNNKLGQGGFGEVYKGMLPNET--EIAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCIERDEQILVYEFVSNKSLDYFLFD-PKMKSQLDWKRRYNIIGGVTRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDQTGRVVGTFGYMPPEYV 513          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.821e-33
Identity = 81/212 (38.21%), Postives = 126/212 (59.43%), Query Frame = 2
Query:   86 RRRKYENNVQDSSTSETNLRLFSYN--ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM-IRGTRGYVAPEWVQM 703
            R+ K    V+ + T  T++R   Y    ++ AT  F E LG G  G V+KG L    GK IAVK+L    ++ ++EFK+EV  + +  H+NLV+LLGF  +   +++VYE++ N +L  ++F   K    DW  R +I    ARG++YLH++    IIH D+K  NILLD + + K++DFG +++   DQS   T    GT GY+APE++++
Sbjct:  325 RKEKPYQEVELNQTGITSVRSLQYKFKTIETATNNFSERLGHGGSGHVFKGRLPD--GKEIAVKRLSEKTEQSKKEFKNEVVLVAKLQHRNLVRLLGFSVKGEEKIIVYEYLPNRSLDYILFDPTKQGELDWKKRYKIIGGTARGILYLHQDSQPTIIHRDLKAGNILLDAHMNPKVADFGTARIFGMDQSVAITANAAGTPGYMAPEYMEL 534          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.821e-33
Identity = 83/215 (38.60%), Postives = 131/215 (60.93%), Query Frame = 2
Query:   86 RRRKYENNVQDSST--SETNLRLFSYNELKEATGGFK--EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEWVQMH 706
            RR+ Y+    +S +  S T+  ++ +  ++ AT  F    +LG G FG VYKG  K ++G  +AVK+L + + +  REF++E   + +  H+NLV+LLGFC E   ++L+YEF+ N +L   +F   K    DW  R +I   IARG++YLH++  + IIH D+K  NILLD   + KI+DFGL+ +   +Q++ +T  I GT  Y++PE+  MH
Sbjct:  315 RRKSYQRTKTESESDISTTDSLVYDFKTIEAATNKFSTSNKLGEGGFGAVYKG--KLSNGTDVAVKRLSKKSGQGTREFRNEAVLVTKLQHRNLVRLLGFCLEREEQILIYEFVHNKSLDYFLFDPEKQSQLDWTRRYKIIGGIARGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGLATIFGVEQTQGNTNRIAGTYAYMSPEYA-MH 526          
The following BLAST results are available for this feature:
BLAST of FC929873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HERK_ARATH1.654e-3339.81Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
CRK25_ARATH1.654e-3340.50Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
CRK23_ARATH1.654e-3340.70Putative cysteine-rich receptor-like protein kinas... [more]
Y5169_ARATH2.160e-3338.78Probable LRR receptor-like serine/threonine-protei... [more]
CRK12_ARATH2.160e-3338.86Putative cysteine-rich receptor-like protein kinas... [more]
Y5181_ARATH2.821e-3338.81Probable LRR receptor-like serine/threonine-protei... [more]
WAKLB_ARATH2.821e-3340.57Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
CRK31_ARATH2.821e-3340.74Putative cysteine-rich receptor-like protein kinas... [more]
CRK13_ARATH2.821e-3338.21Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
CRK11_ARATH2.821e-3338.60Cysteine-rich receptor-like protein kinase 11 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC34001D03EF PostHarvC1 Citrus clementina cDNA clone C34001D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929873 ID=FC929873; Name=FC929873; organism=Citrus clementina; type=EST; length=723bp
ATTCTTATTAGGTCCTTTCCTGCGAGGAAGTTCTATATTCTGCAATGCCT
TTCTGCTGCTAGCAATACTTATCCTTTTAAAGTGGCGCAGGAGAAAGTAT
GAAAATAATGTCCAAGATTCAAGCACTTCCGAAACAAATCTGCGATTATT
TTCCTATAACGAACTTAAAGAAGCGACAGGCGGGTTCAAAGAAGAACTGG
GCCGGGGTTCTTTTGGCATAGTTTACAAAGGAGTCCTCAAATCTGCTTCA
GGAAAGGCTATAGCTGTCAAGAAACTGGACAGGTTAGCTCAAGAAAGGGA
ACGGGAATTCAAATCTGAAGTGAGTGCAATTGGGAGAACTCATCACAAGA
ATCTAGTCCAGTTACTTGGATTCTGTGATGAAGCTCTCAACCGGCTTTTA
GTATACGAATTCATGGGCAATGGCACTTTGGCAAACTTAATATTTGCAAT
TCCAAAGCCTGACTGGAATCTCCGAGTTCGGATTTCACTGGAAATTGCAA
GAGGGCTTGTGTACTTGCATGAAGAGTGCAATGTGCCCATCATTCACTGC
GATATAAAGCCTCAAAACATACTTCTAGATAACTATTTCAGCGCAAAAAT
TTCTGACTTTGGATTATCCAAGTTGTTACTCTCTGATCAGTCTCGAACAC
ATACCATGATCAGAGGAACTCGGGGATATGTGGCTCCAGAATGGGTTCAG
ATGCACCTATCTCAGCCAAAGTG
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