FC929880

Overview
NameFC929880
Unique NameFC929880
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929880 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 8.880e-24
Identity = 74/203 (36.45%), Postives = 105/203 (51.72%), Query Frame = 1
Query:  124 SDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT----KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN---DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 711
            + G Q+ D  L+AE  +  +K+K++K+Y+ +EE   R  V++ N+R  K     +    +  T    KF D T  EFR+        + +PA A   P    +    LP   DWR+ G VT V++QG CGSCW+F+A GA+EG  F  TG L  LS Q L+DC            + GC  G  + AFEY+LK  G+E E  Y
Sbjct:   15 ASGAQAHDPKLDAE--WKDWKTKYAKSYSPKEEA-LRRAVWEENMRMIKLHNKENSLGKNNFTMKMNKFGDQTSEEFRKSI----DNIPIPA-AMTDPHAQNHVSIGLPDYKDWREEGYVTPVRNQGKCGSCWAFAAAGAIEGQMFWKTGNLTPLSVQNLLDCSKTVG-------NKGCQSGTAHQAFEYVLKNKGLEAEATY 202          
BLAST of FC929880 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.756e-23
Identity = 65/188 (34.57%), Postives = 95/188 (50.53%), Query Frame = 1
Query:  139 SEDHLLNAEHHFSLFKS---KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND--LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 687
            S++ L + E    LF+S   K +K Y   +E  YRF +FK NL+        + +   G+  F+D++  EF+ ++ G         +     +L   D  +P   DWR  GAVT VK+QG+CGSCW+FSA   +EG   + TG L   SEQ+L+DCD             GCNGG   SA + + + G
Sbjct:   34 SQNDLTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRR---------SYGCNGGYPWSALQLVAQYG 212          
BLAST of FC929880 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.518e-23
Identity = 49/98 (50.00%), Postives = 66/98 (67.35%), Query Frame = 1
Query:  418 NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 711
            +DLP   DWR++GAV  VK+QG CGSCW+FS   A+EG + + TG+L+SLSEQQLVDC          + + GC GG MN AF++I+  GG+  E+ Y
Sbjct:    1 DDLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCT---------TANHGCRGGWMNPAFQFIVNNGGINSEETY 89          
BLAST of FC929880 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.518e-23
Identity = 64/189 (33.86%), Postives = 96/189 (50.79%), Query Frame = 1
Query:  151 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADA---QKAPILPTND-----LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 693
            L N++  F  F  K++KTY + EE   +   FK NL+    + +    AV  + ++SDL  +   R+  G    L+    A    +  ++   D     LP   DWRD   VT VK+Q  CGSCW+FS    +E  + +   + ++LSEQ LV+CD         + ++GC GGLM+ A E IL+ GGV
Sbjct:   25 LNNSDELFKNFAIKYNKTYVSDEERAIKLENFKNNLKMINEKNMASKYAVFDINEYSDLNKNALLRRTTGFRLGLKKNPSAFTMTECSVVVIKDEPQALLPETLDWRDKHGVTPVKNQMECGSCWAFSTIANIESLYNIKYDKALNLSEQHLVNCD---------NINNGCAGGLMHWALESILQEGGV 204          
BLAST of FC929880 vs. ExPASy Swiss-Prot
Match: CATW_HUMAN (Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 9.818e-23
Identity = 69/190 (36.32%), Postives = 100/190 (52.63%), Query Frame = 1
Query:  154 LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLD-PTAVHGVTKFSDLTPSEFRRQFLGLNRRLR-LPADAQKAPIL-PTNDLPTDFDWRD-HGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 711
            L  +  F LF+ +F+++Y + EEH +R  +F  NL +A+R Q  D  TA  GVT FSDLT  EF  Q  G  R    +P+  ++     P   +P   DWR    A++ +KDQ  C  CW+ +A G +E    +S  + V +S Q+L+DC         G C  GC+GG +  AF  +L   G+  EKDY
Sbjct:   36 LELKEAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEFG-QLYGYRRAAGGVPSMGREIRSEEPEESVPFSCDWRKVASAISPIKDQKNCNCCWAMAAAGNIETLWRISFWDFVDVSVQELLDC---------GRCGDGCHGGFVWDAFITVLNNSGLASEKDY 215          
BLAST of FC929880 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.282e-22
Identity = 63/181 (34.81%), Postives = 87/181 (48.07%), Query Frame = 1
Query:  181 FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 711
            FK   ++TY +  E   RF +F+  LR+     +     + T    + KFSD+T  EFR   L  N   R   +  +   L     P   DWR  G V  V++QG CGSCW+ S   A+E    + +G  V LS QQLVDC        +   + GCNGG   + FEY+ K  G+E + DY
Sbjct:   26 FKKTHARTYKSLREEKLRFNIFQDTLRQIAEHNVKYENGESTYYLAINKFSDITDEEFR-DMLMKNEASRPNLEGLEVADLTVGAAPESIDWRSKGVVLPVRNQGECGSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDC-------STSYGNHGCNGGFAVNGFEYV-KDNGLESDADY 197          
BLAST of FC929880 vs. ExPASy Swiss-Prot
Match: CYSP_THEPA (Cysteine proteinase OS=Theileria parva GN=TP03_0285 PE=3 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.187e-22
Identity = 71/215 (33.02%), Postives = 99/215 (46.05%), Query Frame = 1
Query:  127 DGEQSEDHLLNAE--HHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQF--------------------------LGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 687
            DG  S+D  L  E    F  F SK+++ +ATQ+E   R   F++N    K ++  +P  V G+ +FSDLT  EF + F                            L + L    D   A +   N      DWR   +VT VKDQ  CG CW+FS  G++EG +     +   LS Q+L+DCD         S  +GC GGL+ SA+EY+ K G
Sbjct:  108 DGFLSDDPKLEYEVYREFEEFNSKYNRRHATQQERLNRLVTFRSNYLEVKEQKGDEPY-VKGINRFSDLTEREFYKLFPVMKPPKATYSNGYYLLSHMANKTYLKNLKKALNTDEDVDLAKLTGEN-----LDWRRSSSVTSVKDQSNCGGCWAFSTVGSVEGYYMSHFDKSYELSVQELLDCD---------SFSNGCQGGLLESAYEYVRKYG 307          
BLAST of FC929880 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.731e-22
Identity = 47/96 (48.96%), Postives = 66/96 (68.75%), Query Frame = 1
Query:  424 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 711
            LP+  DWR  GAV  +K+Q  CGSCW+FSA  A+E  + + TG+L+SLSEQ+LVDCD         +   GCNGG MN+AF+YI+  GG++ +++Y
Sbjct:    1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCD---------TASHGCNGGWMNNAFQYIITNGGIDTQQNY 87          
BLAST of FC929880 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.731e-22
Identity = 52/96 (54.17%), Postives = 64/96 (66.67%), Query Frame = 1
Query:  424 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 711
            +P   DW   G VT VK+QG CGSCW+FSATGALEG  F  TG+LVSLSEQ LVD             + GCNGGLM++AF+YI + GG++ E+ Y
Sbjct:    1 VPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDSSRP-------QGNQGCNGGLMDNAFQYIKENGGLDSEESY 89          
BLAST of FC929880 vs. ExPASy Swiss-Prot
Match: CATL2_PARTE (Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT00022898001 PE=3 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 4.873e-22
Identity = 69/185 (37.30%), Postives = 97/185 (52.43%), Query Frame = 1
Query:  172 FSLFKSKFSKTYATQEEHDYRFRVFKANLR--RAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQ-KAPILPTNDLPTDFDWRDHGAVT--GVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 711
            ++ +K K+++ Y +Q +  YRF+VF  NL   RA +      T    + +F+D++  EF   +L L    R+P  A+  A          + DW D+  V    VK+QG+CGSCW+FSA GALE    +   +   LSEQ LVDC    D E       GCNGG M+SAFEY+    G+   KDY
Sbjct:   26 YANWKMKYNRRYTSQRDEMYRFKVFSDNLNYIRAFQDSTESATYTLELNQFADMSQQEFASTYLSL----RVPKTAKLNASNANFQYKGAEVDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNKKYELSEQDLVDCSGPYDNE-------GCNGGWMDSAFEYVAD-NGLAEAKDY 198          
The following BLAST results are available for this feature:
BLAST of FC929880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CATJ_MOUSE8.880e-2436.45Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
PAPA1_CARPA5.756e-2334.57Papain OS=Carica papaya PE=1 SV=1[more]
CPGP2_ZINOF7.518e-2350.00Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CATV_GVCP7.518e-2333.86Viral cathepsin OS=Cydia pomonella granulosis viru... [more]
CATW_HUMAN9.818e-2336.32Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2[more]
CATLL_PHACE1.282e-2234.81Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CYSP_THEPA2.187e-2233.02Cysteine proteinase OS=Theileria parva GN=TP03_028... [more]
ERVB_TABDI3.731e-2248.96Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
CATL1_SHEEP3.731e-2254.17Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]
CATL2_PARTE4.873e-2237.30Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT0... [more]

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Properties
Property NameValue
Genbank descriptionC34001D10EF PostHarvC1 Citrus clementina cDNA clone C34001D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929880 ID=FC929880; Name=FC929880; organism=Citrus clementina; type=EST; length=713bp
GGAAACAAATCAAAAATGGACCGCCGTATTCTCTCCTCTCTCCTCCTCCT
CCTCCTATCTGCTGTGCTTGCGTCCGCCGTAGCTGTCAGCGGCGACGATG
CTATGATCAGACAGGTCGTGCCATCAGACGGCGAACAATCCGAAGATCAT
CTCCTGAACGCGGAGCACCACTTCTCCCTCTTCAAGTCCAAATTCTCCAA
GACTTACGCCACTCAGGAGGAGCACGATTACCGATTCCGCGTGTTCAAGG
CTAACCTCCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACTGCTGTC
CACGGTGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGCCGTCA
GTTCCTTGGCTTGAATAGGCGGCTTCGGCTACCAGCTGACGCTCAAAAGG
CTCCTATCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGGCGTGAT
CACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTG
GTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGG
GCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAG
TGTGATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCT
AATGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAG
AGAAGGACTACCC
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