FC929880

Overview
NameFC929880
Unique NameFC929880
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929880 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 3.367e-31
Identity = 78/193 (40.41%), Postives = 108/193 (55.96%), Query Frame = 1
Query:  145 DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTK----FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 711
            D   NA+ H   +KS   + Y T EE ++R  V++ N+R  +          HG T     F D+T  EFR+   G   +        + P++    +P   DWR+ G VT VK+QG CGSCW+FSA+G LEG  FL TG+L+SLSEQ LVDC H+         + GCNGGLM+ AF+YI + GG++ E+ Y
Sbjct:   22 DQTFNAQWH--QWKSTHRRLYGTNEE-EWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQKHKKGRLFQEPLML--QIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHD-------QGNQGCNGGLMDFAFQYIKENGGLDSEESY 202          
BLAST of FC929880 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.397e-31
Identity = 69/188 (36.70%), Postives = 109/188 (57.98%), Query Frame = 1
Query:  151 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPI-LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 711
            LL A  +F  F  KF+K Y+++ E   RF++F+ NL     +   D +A + + KFSDL+  E   ++ GL+  L+     +   +  P +  P +FDWR    VT VK+QG CG+CW+F+  G+LE    +   +L++LSEQQL+DCD           D GC+GGL+++A+E ++  GG++ E DY
Sbjct:   21 LLKAPSYFEEFLHKFNKNYSSESEKLRRFKIFQHNLEEIINKNQNDTSAQYEINKFSDLSKDETISKYTGLSLPLQKQNFCEVVVLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDF---------VDVGCDGGLLHTAYEAVMNMGGIQAENDY 199          
BLAST of FC929880 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 5.743e-31
Identity = 84/204 (41.18%), Postives = 113/204 (55.39%), Query Frame = 1
Query:  124 SDG----EQSEDHLLNAEHH---FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS-GCNGGLMNSAFEYILKAGGVEREKDY 711
            SDG    E+S   +L    H   F+ F  ++ K Y   EE   RF +FK NL   +       +   GV +F+DLT  EF+R  LG  +     A  + +  +    LP   DWR+ G V+ VKDQG CGSCW+FS TGALE A+  + G+ +SLSEQQLVDC        +G+ ++ GCNGGL + AFEYI   GG++ EK Y
Sbjct:   36 SDGLREVEESVSQILGQSRHVLSFARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLGAAQNCS--ATLKGSHKVTEAALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDC--------AGAFNNYGCNGGLPSQAFEYIKSNGGLDTEKAY 229          
BLAST of FC929880 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.500e-31
Identity = 77/183 (42.08%), Postives = 99/183 (54.10%), Query Frame = 1
Query:  172 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPI-LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKDY 711
            F+ FK K  + Y +  E  +R  VF+ NL  A+     +P A  GVT FSDLT  EFR ++           +  + P+ +     P   DWR  GAVT VKDQG CGSCW+FSA G +E   FL+   L +LSEQ LV CD           DSGC+GGLMN+AFE+I++   G V  E  Y
Sbjct:   38 FAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHNGAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCD---------KTDSGCSGGLMNNAFEWIVQENNGAVYTEDSY 211          
BLAST of FC929880 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.500e-31
Identity = 81/204 (39.71%), Postives = 110/204 (53.92%), Query Frame = 1
Query:  148 HLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAK---RRQLLD---------PTAVHGVTKFSDLTPSEFRRQ----FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 711
            +L  +E +F  F  +++K+Y   +E+ YR+ VFK NL +     R  LL+          +A  GV KFSD TP E        FL L++   L  + +     P   LP  +DWRD   VT +KDQG CGSCW+F A G +E  + +   +L+ LSEQQL+DCD           D GCNGGLM+ AF+ +L  GGVE E DY
Sbjct:   49 NLDQSEIYFKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNKFSDKTPDEVLHSNTGFFLNLSQHYTL-CENRIVKGAPDIRLPDYYDWRDTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCD---------EVDLGCNGGLMHLAFQELLLMGGVETEADY 242          
BLAST of FC929880 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 9.796e-31
Identity = 79/182 (43.41%), Postives = 97/182 (53.30%), Query Frame = 1
Query:  181 FKSKFSKTYATQEEHDYRFRVFKANLRRA----KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGS-CDSGCNGGLMNSAFEYILKAGGVEREKDY 711
            FK KF + Y   EE  YR  VF  NL+      K+ +  + T    + +FSD+T  +F     G  +  R  A        P +   T+ DWR  GAVT VKDQG CGSCW+FS TG +EG HFL TG LVSLSEQQLVDC         GS  + GCNGG +  A  Y+   GGV+ E  Y
Sbjct:   23 FKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKFNAVMKGYKKGPRPAAVFTSTDAAPES---TEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIEGQHFLKTGRLVSLSEQQLVDC-------AGGSYYNQGCNGGWVERAIMYVRDNGGVDTESSY 194          
BLAST of FC929880 vs. ExPASy Swiss-Prot
Match: CATV_NPVMC (Viral cathepsin OS=Mamestra configurata nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.796e-31
Identity = 69/193 (35.75%), Postives = 110/193 (56.99%), Query Frame = 1
Query:  157 NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPT--------NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 711
            +A  +F  F S+++K Y++++E  YR+ +F+ N+     +   + +AV+ + +F+D+T +E       +NR   L +    A    T           P +FDWR++  VT VKDQG CG+CW+F+  GALE  + +    L+ L+EQQLVDCD           D GC+GGL+++A+E I+  GGVE+E DY
Sbjct:   35 SAPLYFEKFISQYNKQYSSEDEKKYRYNIFRHNIESINAKNSRNDSAVYKINRFADMTKNEV------VNRHTGLASGDIGANFCETIVVDGPGQRQRPANFDWRNYNKVTSVKDQGMCGACWAFAGLGALESQYAIKYDRLIDLAEQQLVDCDF---------VDMGCDGGLIHTAYEQIMHIGGVEQEYDY 212          
BLAST of FC929880 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.279e-30
Identity = 75/192 (39.06%), Postives = 111/192 (57.81%), Query Frame = 1
Query:  151 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 711
            LL A ++F  F  +F+K Y ++ E   RF++F+ NL     +   D +A + + KFSDL+  E   ++ GL+    LP   Q   K  +L  P    P +FDWR    VT VK+QG CG+CW+F+   +LE    +   +L++LSEQQ++DCD           D+GCNGGL+++AFE I+K GGV+ E DY
Sbjct:   21 LLKAPNYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIINKNQND-SAKYEINKFSDLSKDETIAKYTGLS----LPIQTQNFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDY 198          
BLAST of FC929880 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.182e-30
Identity = 76/193 (39.38%), Postives = 107/193 (55.44%), Query Frame = 1
Query:  145 DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHG----VTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 711
            D   +AE H   +KS   + Y T EE ++R  +++ N+R  +          HG    +  F D+T  EFR+   G   +        + P++    +P   DWR+ G VT VK+QG CGSCW+FSA+G LEG  FL TG+L+SLSEQ LVDC H          + GCNGGLM+ AF+YI + GG++ E+ Y
Sbjct:   22 DQTFSAEWH--QWKSTHRRLYGTNEE-EWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLK--IPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSH-------AQGNQGCNGGLMDFAFQYIKENGGLDSEESY 202          
BLAST of FC929880 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.850e-30
Identity = 75/192 (39.06%), Postives = 111/192 (57.81%), Query Frame = 1
Query:  151 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 711
            LL A ++F  F  +F+K Y ++ E   RF++F+ NL     +   D +A + + KFSDL+  E   ++ GL+    LP   Q   K  +L  P    P +FDWR    VT VK+QG CG+CW+F+   +LE    +   +L++LSEQQ++DCD           D+GCNGGL+++AFE I+K GGV+ E DY
Sbjct:   21 LLKAPNYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIIIKNQND-SAKYEINKFSDLSKDETIAKYTGLS----LPIQTQNFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDY 198          
The following BLAST results are available for this feature:
BLAST of FC929880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CATL1_RAT3.367e-3140.41Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
CATV_NPVAP4.397e-3136.70Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
ALEU_ARATH5.743e-3141.18Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
CYSP_TRYCR7.500e-3142.08Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CATV_NPVHZ7.500e-3139.71Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CYSP1_HOMAM9.796e-3143.41Digestive cysteine proteinase 1 OS=Homarus america... [more]
CATV_NPVMC9.796e-3135.75Viral cathepsin OS=Mamestra configurata nucleopoly... [more]
CATV_NPVAC1.279e-3039.06Viral cathepsin OS=Autographa californica nuclear ... [more]
CATL1_MOUSE2.182e-3039.38Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CATV_NPVRO2.850e-3039.06Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]

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Properties
Property NameValue
Genbank descriptionC34001D10EF PostHarvC1 Citrus clementina cDNA clone C34001D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929880 ID=FC929880; Name=FC929880; organism=Citrus clementina; type=EST; length=713bp
GGAAACAAATCAAAAATGGACCGCCGTATTCTCTCCTCTCTCCTCCTCCT
CCTCCTATCTGCTGTGCTTGCGTCCGCCGTAGCTGTCAGCGGCGACGATG
CTATGATCAGACAGGTCGTGCCATCAGACGGCGAACAATCCGAAGATCAT
CTCCTGAACGCGGAGCACCACTTCTCCCTCTTCAAGTCCAAATTCTCCAA
GACTTACGCCACTCAGGAGGAGCACGATTACCGATTCCGCGTGTTCAAGG
CTAACCTCCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACTGCTGTC
CACGGTGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGCCGTCA
GTTCCTTGGCTTGAATAGGCGGCTTCGGCTACCAGCTGACGCTCAAAAGG
CTCCTATCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGGCGTGAT
CACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTG
GTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGG
GCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAG
TGTGATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCT
AATGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAG
AGAAGGACTACCC
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