FC929881

Overview
NameFC929881
Unique NameFC929881
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_BACSK (Allantoinase OS=Bacillus clausii (strain KSM-K16) GN=allB PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.055e-21
Identity = 63/185 (34.05%), Postives = 98/185 (52.97%), Query Frame = 1
Query:  145 LTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQ-VVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPXD----NASHIKEGLSVLARYKEL 684
            +T  R+V P GV    V I+ G I  I      P N K  + +++     + PG +D H H  +PGRTEWEGF +             ++MPLN+ P+T +   L+ K++AA+ + YVD  F+GGLVP N +  + L A   +GV+  K F+ P G +D P D    + + ++ G+ +LA   +L
Sbjct:    6 ITGGRVVLPSGVEETDVGIQAGKIARI-----GPINKKEARCIMNANGQYVFPGAVDTHVHFSEPGRTEWEGFFTGSRSLAAGGTTTYVEMPLNALPATTNRANLQRKLEAAKGQNYVDYSFYGGLVPTNLHELADLSA---SGVVAFKCFLSPCG-SDIPGDFRNVDLNGLRAGMRLLAEKGQL 181          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_SOLUE (Allantoinase OS=Solibacter usitatus (strain Ellin6076) GN=allB PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20
Identity = 58/172 (33.72%), Postives = 84/172 (48.84%), Query Frame = 1
Query:  157 RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPXDNASHIKEGLSVLAR 672
            ++V   GV+S  V I++G I +I  E    +       ++     + PG+ID H H ++PGRTEWEG  +              DMPLNS P T+       K  A E+    D   WGG+VP    N S L  L  +GV+G K+F+  SG+ +FP  +   + EG+   AR
Sbjct:   10 QVVQAGGVVSADVAIEDGRISAIGPELPGAKRE-----INARGLTVFPGVIDDHLHFNEPGRTEWEGAATGSRALAAGGGTAFFDMPLNSTPCTVDRAAFAGKRAALERASIADFALWGGIVPG---NLSELAPLAESGVIGFKAFLSDSGLPEFPRADDLTLYEGMREAAR 173          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_BACSU (Allantoinase OS=Bacillus subtilis GN=allB PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20
Identity = 52/171 (30.41%), Postives = 88/171 (51.46%), Query Frame = 1
Query:  157 RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPXDNASHIKEGLSVLA 669
            + VTP GVI   + ++ G I  I S+ +    +   +++      + PG+ID H H ++PGR +WEGF +              DMPLN  PST++ E L  K +   ++  VD   WGGLVP +  +   +  +  AG +G K+F+  SG ++F   +   + +G++ +A
Sbjct:   11 KAVTPDGVIEADIVVQNGVIAEIGSDIE----ASGTEIIQADGKYVFPGVIDCHVHFNEPGREDWEGFETGSQMMAAGGCTTYFDMPLNCIPSTVTAEHLLAKAELGRQKSAVDFALWGGLVPGHIED---IRPMAEAGAIGFKAFLSKSGTDEFRSVDERTLLKGMAEIA 174          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_RUBXD (Allantoinase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=allB PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.558e-20
Identity = 55/172 (31.98%), Postives = 82/172 (47.67%), Query Frame = 1
Query:  160 IVTPKGVISGAVEIKEGNIIS-IVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPXDNASHIKEGLSVLAR 672
            IV    V+ G  E+ +  +   ++S           + +D    +++PG ID H H ++PGRT WEGF S             ++MPLN+ P T   E+  LK+ AA+   +VD   WGG+VP        +E L   GV G K+FM  +G  DF   +   + EG+   AR
Sbjct:    7 IVRGGTVVRGGCEVADVGVADGVISAVGPDLEGGAREEIDARGLLVLPGAIDAHVHFNEPGRTRWEGFASGTRALAAGGTTLCVEMPLNAHPPTTDGESFDLKLAAAKASAHVDFALWGGIVPG---RVGRMEELAGRGVAGFKAFMSATGTPDFEAADDLTLYEGMQEAAR 175          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_DEIGD (Allantoinase OS=Deinococcus geothermalis (strain DSM 11300) GN=allB PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.751e-19
Identity = 53/167 (31.74%), Postives = 77/167 (46.11%), Query Frame = 1
Query:  157 RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPXDNASHIKEGL 657
            ++V   GV    + + E  I+ I  E          + +D     + PG +D+H H ++PGRT+WEG  +              DMPLNS P  +   T + K  AAE+  Y D   WGGL P    N   L  L  AG +G K+FM  SG+ +F   +   + EG+
Sbjct:   10 QLVREGGVEQADLGVVEERIVEIAPE----LMGDAREELDARGLHVFPGAVDIHVHFNEPGRTDWEGIRTGSRALVAGGGTVFADMPLNSTPPVLDRTTFEAKQQAAERESYADFALWGGLTPR---NLDRLPELAEAGAVGFKAFMSHSGLEEFESPDDFTLYEGM 169          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_BACA2 (Allantoinase OS=Bacillus amyloliquefaciens (strain FZB42) GN=allB PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.862e-18
Identity = 52/171 (30.41%), Postives = 80/171 (46.78%), Query Frame = 1
Query:  157 RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPXDNASHIKEGLSVLA 669
            + V   G     + +K+G I  I    D        QVV      + PG +D H H ++PGR EWEG  +              DMPLN  PST++ E L  K + AE++  VD   WGGL+P    +   +  +  AG +G K+F+  SG ++F   +   + +G+  +A
Sbjct:   11 KAVRKGGTERADIAVKDGKIALIGPGID----ENAEQVVQADGMYVFPGAVDCHVHFNEPGREEWEGIETGSNMLAAGGCTSYFDMPLNCIPSTVTAENLLAKAEIAERKSAVDFALWGGLMPGYTEH---IRPMAEAGAIGFKAFLSKSGTDEFQSADERTLLKGMKEIA 174          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_SALCH (Allantoinase OS=Salmonella choleraesuis GN=allB PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.431e-18
Identity = 54/170 (31.76%), Postives = 84/170 (49.41%), Query Frame = 1
Query:  193 VEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG----INDFPXDNASHIKEGLSVLARYKELYL 690
            + ++ G I +I    +  +N     V+D    ++ PG++D H H+ +PGRT WEG+ +            +I+MPLN  P+T+  ET++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G K F+   G     NDF   N     +G   L    +  L
Sbjct:   23 IAVQGGKIAAIGENLEEAKN-----VLDATGLIVSPGMVDAHTHISEPGRTHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRETIELKFDAAKGKLTIDAAQLGGLV---SYNLDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFYKGAQKLGEMDQTVL 184          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_SALTY (Allantoinase OS=Salmonella typhimurium GN=allB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18
Identity = 50/145 (34.48%), Postives = 74/145 (51.03%), Query Frame = 1
Query:  268 VVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG----INDFPXDNASHIKEGLSVLARYKELYL 690
            V+D    ++ PG++D H H+ +PGRT WEG+ +            +I+MPLN  P+T+  ET++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G K F+   G     NDF   N     +G   L    +  L
Sbjct:   43 VLDATGLIVSPGMVDAHTHISEPGRTHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRETIELKFDAAKGKLTIDAAQLGGLV---SYNLDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFYKGAQKLGEMDQTVL 184          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_SALTI (Allantoinase OS=Salmonella typhi GN=allB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18
Identity = 50/145 (34.48%), Postives = 74/145 (51.03%), Query Frame = 1
Query:  268 VVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG----INDFPXDNASHIKEGLSVLARYKELYL 690
            V+D    ++ PG++D H H+ +PGRT WEG+ +            +I+MPLN  P+T+  ET++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G K F+   G     NDF   N     +G   L    +  L
Sbjct:   43 VLDATGLIVSPGMVDAHTHISEPGRTHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRETIELKFDAAKGKLTIDAAQLGGLV---SYNLDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFYKGAQKLGEMDQTVL 184          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_SALPK (Allantoinase OS=Salmonella paratyphi A (strain AKU_12601) GN=allB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18
Identity = 50/145 (34.48%), Postives = 74/145 (51.03%), Query Frame = 1
Query:  268 VVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG----INDFPXDNASHIKEGLSVLARYKELYL 690
            V+D    ++ PG++D H H+ +PGRT WEG+ +            +I+MPLN  P+T+  ET++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G K F+   G     NDF   N     +G   L    +  L
Sbjct:   43 VLDATGLIVSPGMVDAHTHISEPGRTHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRETIELKFDAAKGKLTIDAAQLGGLV---SYNLDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFYKGAQKLGEMDQTVL 184          
The following BLAST results are available for this feature:
BLAST of FC929881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
ALLB_BACSK1.055e-2134.05Allantoinase OS=Bacillus clausii (strain KSM-K16) ... [more]
ALLB_SOLUE2.598e-2033.72Allantoinase OS=Solibacter usitatus (strain Ellin6... [more]
ALLB_BACSU2.598e-2030.41Allantoinase OS=Bacillus subtilis GN=allB PE=2 SV=... [more]
ALLB_RUBXD7.558e-2031.98Allantoinase OS=Rubrobacter xylanophilus (strain D... [more]
ALLB_DEIGD3.751e-1931.74Allantoinase OS=Deinococcus geothermalis (strain D... [more]
ALLB_BACA21.862e-1830.41Allantoinase OS=Bacillus amyloliquefaciens (strain... [more]
ALLB_SALCH2.431e-1831.76Allantoinase OS=Salmonella choleraesuis GN=allB PE... [more]
ALLB_SALTY4.147e-1834.48Allantoinase OS=Salmonella typhimurium GN=allB PE=... [more]
ALLB_SALTI4.147e-1834.48Allantoinase OS=Salmonella typhi GN=allB PE=3 SV=1[more]
ALLB_SALPK4.147e-1834.48Allantoinase OS=Salmonella paratyphi A (strain AKU... [more]

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Properties
Property NameValue
Genbank descriptionC34001D12EF PostHarvC1 Citrus clementina cDNA clone C34001D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929881 ID=FC929881; Name=FC929881; organism=Citrus clementina; type=EST; length=698bp
AGAGGAATGGAGAATCTCAATCTGCAGTGGAGGCTGTTGCCTACGCTAAC
ACTGCTAGCTGCTTCTCTGTTCTTGCTTGTTTTTAAGGATTCTGCCAAGT
TATCTCACAGTGAGTGCAGTCTCCTTCCTTACAACCAGTACTGGTTAACC
AGCAAGCGGATTGTGACACCAAAAGGAGTTATTTCTGGTGCAGTTGAGAT
CAAGGAAGGGAATATCATATCCATTGTTTCAGAAGAAGATTGGCCTCGGA
ACTCCAAGACAGGACAAGTAGTTGATTATGGAGAGGCTGTTATCATGCCT
GGTTTGATTGATGTGCATGCACATCTCGATGATCCAGGAAGAACTGAGTG
GGAAGGATTTCCTTCGGGGACCAAAGCAGCTGCTGCAGGTGGTATAACAA
CATTAATTGACATGCCCCTCAATAGCGATCCCTCAACTATCTCAACGGAA
ACTCTGAAATTAAAGGTTGATGCAGCAGAGAAGAGAATCTATGTTGATGT
TGGTTTTTGGGGAGGTCTAGTTCCTGAAAATGCATATAATGCAAGTGCTC
TAGAAGCTCTTTTGAATGCTGGTGTTCTTGGATTAAAGTCTTTTATGTGT
CCTTCAGGGATCAACGACTTTCCTATNGACAATGCCAGCCATATTAAGGA
AGGACTATCTGTATTGGCAAGATACAAAGAACTTTACTTGTACATGCT
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