FC929881

Overview
NameFC929881
Unique NameFC929881
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_SALPB (Allantoinase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=allB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18
Identity = 50/145 (34.48%), Postives = 74/145 (51.03%), Query Frame = 1
Query:  268 VVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG----INDFPXDNASHIKEGLSVLARYKELYL 690
            V+D    ++ PG++D H H+ +PGRT WEG+ +            +I+MPLN  P+T+  ET++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G K F+   G     NDF   N     +G   L    +  L
Sbjct:   43 VLDATGLIVSPGMVDAHTHISEPGRTHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRETIELKFDAAKGKLTIDAAQLGGLV---SYNLDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFYKGAQKLGEMDQTVL 184          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_SALPA (Allantoinase OS=Salmonella paratyphi A GN=allB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18
Identity = 50/145 (34.48%), Postives = 74/145 (51.03%), Query Frame = 1
Query:  268 VVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG----INDFPXDNASHIKEGLSVLARYKELYL 690
            V+D    ++ PG++D H H+ +PGRT WEG+ +            +I+MPLN  P+T+  ET++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G K F+   G     NDF   N     +G   L    +  L
Sbjct:   43 VLDATGLIVSPGMVDAHTHISEPGRTHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRETIELKFDAAKGKLTIDAAQLGGLV---SYNLDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFYKGAQKLGEMDQTVL 184          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_SALNS (Allantoinase OS=Salmonella newport (strain SL254) GN=allB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18
Identity = 50/145 (34.48%), Postives = 74/145 (51.03%), Query Frame = 1
Query:  268 VVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG----INDFPXDNASHIKEGLSVLARYKELYL 690
            V+D    ++ PG++D H H+ +PGRT WEG+ +            +I+MPLN  P+T+  ET++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G K F+   G     NDF   N     +G   L    +  L
Sbjct:   43 VLDATGLIVSPGMVDAHTHISEPGRTHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRETIELKFDAAKGKLTIDAAQLGGLV---SYNLDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFYKGAQKLGEMDQTVL 184          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_SALHS (Allantoinase OS=Salmonella heidelberg (strain SL476) GN=allB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18
Identity = 50/145 (34.48%), Postives = 74/145 (51.03%), Query Frame = 1
Query:  268 VVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG----INDFPXDNASHIKEGLSVLARYKELYL 690
            V+D    ++ PG++D H H+ +PGRT WEG+ +            +I+MPLN  P+T+  ET++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G K F+   G     NDF   N     +G   L    +  L
Sbjct:   43 VLDATGLIVSPGMVDAHTHISEPGRTHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRETIELKFDAAKGKLTIDAAQLGGLV---SYNLDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFYKGAQKLGEMDQTVL 184          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_SALG2 (Allantoinase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=allB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18
Identity = 50/145 (34.48%), Postives = 74/145 (51.03%), Query Frame = 1
Query:  268 VVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG----INDFPXDNASHIKEGLSVLARYKELYL 690
            V+D    ++ PG++D H H+ +PGRT WEG+ +            +I+MPLN  P+T+  ET++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G K F+   G     NDF   N     +G   L    +  L
Sbjct:   43 VLDATGLIVSPGMVDAHTHISEPGRTHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRETIELKFDAAKGKLTIDAAQLGGLV---SYNLDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFYKGAQKLGEMDQTVL 184          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_SALEP (Allantoinase OS=Salmonella enteritidis PT4 (strain P125109) GN=allB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18
Identity = 50/145 (34.48%), Postives = 74/145 (51.03%), Query Frame = 1
Query:  268 VVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG----INDFPXDNASHIKEGLSVLARYKELYL 690
            V+D    ++ PG++D H H+ +PGRT WEG+ +            +I+MPLN  P+T+  ET++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G K F+   G     NDF   N     +G   L    +  L
Sbjct:   43 VLDATGLIVSPGMVDAHTHISEPGRTHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRETIELKFDAAKGKLTIDAAQLGGLV---SYNLDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFYKGAQKLGEMDQTVL 184          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_SALDC (Allantoinase OS=Salmonella dublin (strain CT_02021853) GN=allB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18
Identity = 50/145 (34.48%), Postives = 74/145 (51.03%), Query Frame = 1
Query:  268 VVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG----INDFPXDNASHIKEGLSVLARYKELYL 690
            V+D    ++ PG++D H H+ +PGRT WEG+ +            +I+MPLN  P+T+  ET++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G K F+   G     NDF   N     +G   L    +  L
Sbjct:   43 VLDATGLIVSPGMVDAHTHISEPGRTHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRETIELKFDAAKGKLTIDAAQLGGLV---SYNLDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFYKGAQKLGEMDQTVL 184          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_SALA4 (Allantoinase OS=Salmonella agona (strain SL483) GN=allB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18
Identity = 50/145 (34.48%), Postives = 74/145 (51.03%), Query Frame = 1
Query:  268 VVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG----INDFPXDNASHIKEGLSVLARYKELYL 690
            V+D    ++ PG++D H H+ +PGRT WEG+ +            +I+MPLN  P+T+  ET++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G K F+   G     NDF   N     +G   L    +  L
Sbjct:   43 VLDATGLIVSPGMVDAHTHISEPGRTHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRETIELKFDAAKGKLTIDAAQLGGLV---SYNLDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFYKGAQKLGEMDQTVL 184          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_ENTFA (Allantoinase OS=Enterococcus faecalis GN=allB PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.822e-17
Identity = 54/178 (30.34%), Postives = 88/178 (49.44%), Query Frame = 1
Query:  160 IVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG---RTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG----INDFPXDNASHIKEGLSVLAR 672
            ++   G +   V ++ G I++I  +    R      V+D    V+ PG++D H H+ DPG   R EWEG+ +             ++MPLN  P+T+   +L++K  A E ++ VDVG +GG+VP N   A  ++ L   GV G K F+   G      DF   +   + EG+  +A+
Sbjct:   12 VILETGEVITDVAVQGGKIVAIGQDLSGER------VIDATGLVVSPGMVDAHVHITDPGGGYRDEWEGYVTGTAACAKGGVTTFMEMPLNQIPATVDKTSLEIKYKAGENKLKVDVGSFGGVVPTNL--ADGIQELDEGGVSGYKCFLGTCGDRSIEGDFQNVDDYSLYEGMKQVAK 181          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_ECOUT (Allantoinase OS=Escherichia coli (strain UTI89 / UPEC) GN=allB PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.822e-17
Identity = 45/139 (32.37%), Postives = 75/139 (53.96%), Query Frame = 1
Query:  193 VEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG 609
            + +K+G I +I  +    ++     V+D    V+ PG++D H H+ +PGR+ WEG+ +            +I+MPLN  P+T+   +++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G K F+   G
Sbjct:   23 IAVKDGKIAAIGQDLGDAKD-----VMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLV---SYNIDRLHELDEVGVVGFKCFVATCG 153          
The following BLAST results are available for this feature:
BLAST of FC929881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
ALLB_SALPB4.147e-1834.48Allantoinase OS=Salmonella paratyphi B (strain ATC... [more]
ALLB_SALPA4.147e-1834.48Allantoinase OS=Salmonella paratyphi A GN=allB PE=... [more]
ALLB_SALNS4.147e-1834.48Allantoinase OS=Salmonella newport (strain SL254) ... [more]
ALLB_SALHS4.147e-1834.48Allantoinase OS=Salmonella heidelberg (strain SL47... [more]
ALLB_SALG24.147e-1834.48Allantoinase OS=Salmonella gallinarum (strain 287/... [more]
ALLB_SALEP4.147e-1834.48Allantoinase OS=Salmonella enteritidis PT4 (strain... [more]
ALLB_SALDC4.147e-1834.48Allantoinase OS=Salmonella dublin (strain CT_02021... [more]
ALLB_SALA44.147e-1834.48Allantoinase OS=Salmonella agona (strain SL483) GN... [more]
ALLB_ENTFA7.822e-1730.34Allantoinase OS=Enterococcus faecalis GN=allB PE=3... [more]
ALLB_ECOUT7.822e-1732.37Allantoinase OS=Escherichia coli (strain UTI89 / U... [more]

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Properties
Property NameValue
Genbank descriptionC34001D12EF PostHarvC1 Citrus clementina cDNA clone C34001D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929881 ID=FC929881; Name=FC929881; organism=Citrus clementina; type=EST; length=698bp
AGAGGAATGGAGAATCTCAATCTGCAGTGGAGGCTGTTGCCTACGCTAAC
ACTGCTAGCTGCTTCTCTGTTCTTGCTTGTTTTTAAGGATTCTGCCAAGT
TATCTCACAGTGAGTGCAGTCTCCTTCCTTACAACCAGTACTGGTTAACC
AGCAAGCGGATTGTGACACCAAAAGGAGTTATTTCTGGTGCAGTTGAGAT
CAAGGAAGGGAATATCATATCCATTGTTTCAGAAGAAGATTGGCCTCGGA
ACTCCAAGACAGGACAAGTAGTTGATTATGGAGAGGCTGTTATCATGCCT
GGTTTGATTGATGTGCATGCACATCTCGATGATCCAGGAAGAACTGAGTG
GGAAGGATTTCCTTCGGGGACCAAAGCAGCTGCTGCAGGTGGTATAACAA
CATTAATTGACATGCCCCTCAATAGCGATCCCTCAACTATCTCAACGGAA
ACTCTGAAATTAAAGGTTGATGCAGCAGAGAAGAGAATCTATGTTGATGT
TGGTTTTTGGGGAGGTCTAGTTCCTGAAAATGCATATAATGCAAGTGCTC
TAGAAGCTCTTTTGAATGCTGGTGTTCTTGGATTAAAGTCTTTTATGTGT
CCTTCAGGGATCAACGACTTTCCTATNGACAATGCCAGCCATATTAAGGA
AGGACTATCTGTATTGGCAAGATACAAAGAACTTTACTTGTACATGCT
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