FC929882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929882 vs. ExPASy Swiss-Prot
Match: HINT1_PONAB (Histidine triad nucleotide-binding protein 1 OS=Pongo abelii GN=HINT1 PE=2 SV=3) HSP 1 Score: 131.724 bits (330), Expect = 2.991e-30 Identity = 61/112 (54.46%), Postives = 84/112 (75.00%), Query Frame = 2 Query: 77 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNGPPG 412 TIF KII KEIP+K+++EDD+ LAF DI PQAPTH L+IPK ++ +S AE+ + +LG L+ K A GL G+R+V+N+G +GGQSV+H+H+H+LGGRQM+ PPG Sbjct: 17 TIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKH--ISQISVAEDDNESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG 126
BLAST of FC929882 vs. ExPASy Swiss-Prot
Match: HINT1_HUMAN (Histidine triad nucleotide-binding protein 1 OS=Homo sapiens GN=HINT1 PE=1 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 5.101e-30 Identity = 61/112 (54.46%), Postives = 83/112 (74.11%), Query Frame = 2 Query: 77 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNGPPG 412 TIF KII KEIP+K+++EDD+ LAF DI PQAPTH L+IPK ++ +S AE+ +LG L+ K A GL G+R+V+N+G +GGQSV+H+H+H+LGGRQM+ PPG Sbjct: 17 TIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKH--ISQISVAEDDDESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG 126
BLAST of FC929882 vs. ExPASy Swiss-Prot
Match: HINT_CAEEL (Histidine triad nucleotide-binding protein 1 OS=Caenorhabditis elegans GN=hint-1 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 6.663e-30 Identity = 58/112 (51.79%), Postives = 84/112 (75.00%), Query Frame = 2 Query: 77 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNGPPG 412 T+F KII KEIP+K+++EDD+ LAF D+ PQAP H L+IPK + + L A + ++G+L+ TA VAKQ G+ +G+R+V+N+G +G QSVFH+H+H+LGGRQ+ PPG Sbjct: 21 TLFGKIIRKEIPAKIIFEDDEALAFHDVSPQAPIHFLVIPKRRIDM--LENAVDSDAALIGKLMVTASKVAKQLGMANGYRVVVNNGKDGAQSVFHLHLHVLGGRQLQWPPG 130
BLAST of FC929882 vs. ExPASy Swiss-Prot
Match: YHIT_SYNY3 (Uncharacterized HIT-like protein slr1234 OS=Synechocystis sp. (strain PCC 6803) GN=slr1234 PE=4 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.279e-27 Identity = 61/112 (54.46%), Postives = 77/112 (68.75%), Query Frame = 2 Query: 77 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNGPPG 412 TIF KII +EIP+ +VYEDD LAF+D+ PQAP H+L+IPK L LS A +LG LL AK VA G+ D FR+VIN+G GQ+VFH+H+H+LGGR + PPG Sbjct: 5 TIFSKIIRREIPAAIVYEDDLCLAFKDVNPQAPVHVLLIPKKP--LPQLSAATPEDHALLGHLLLKAKEVAADLGIGDQFRLVINNGAEVGQTVFHLHLHILGGRPFSWPPG 114
BLAST of FC929882 vs. ExPASy Swiss-Prot
Match: HINT_SHIFL (HIT-like protein hinT OS=Shigella flexneri GN=hinT PE=4 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.895e-27 Identity = 60/111 (54.05%), Postives = 81/111 (72.97%), Query Frame = 2 Query: 77 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNGP 406 TIF KII +EIPS +VY+DD V AFRDI PQAPTHILIIP + + ++ H + LGR++ A +A+QEG+ EDG+R+++N +GGQ V+HIH+HLLGGR + GP Sbjct: 5 TIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNIL--IPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPL-GP 112
BLAST of FC929882 vs. ExPASy Swiss-Prot
Match: HINT_ECOLI (HIT-like protein hinT OS=Escherichia coli (strain K12) GN=hinT PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.895e-27 Identity = 60/111 (54.05%), Postives = 81/111 (72.97%), Query Frame = 2 Query: 77 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNGP 406 TIF KII +EIPS +VY+DD V AFRDI PQAPTHILIIP + + ++ H + LGR++ A +A+QEG+ EDG+R+++N +GGQ V+HIH+HLLGGR + GP Sbjct: 5 TIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNIL--IPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPL-GP 112
BLAST of FC929882 vs. ExPASy Swiss-Prot
Match: HINT_ECO57 (HIT-like protein hinT OS=Escherichia coli O157:H7 GN=hinT PE=4 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.895e-27 Identity = 60/111 (54.05%), Postives = 81/111 (72.97%), Query Frame = 2 Query: 77 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNGP 406 TIF KII +EIPS +VY+DD V AFRDI PQAPTHILIIP + + ++ H + LGR++ A +A+QEG+ EDG+R+++N +GGQ V+HIH+HLLGGR + GP Sbjct: 5 TIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNIL--IPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPL-GP 112
BLAST of FC929882 vs. ExPASy Swiss-Prot
Match: YHIT_AQUAE (Uncharacterized HIT-like protein aq_141 OS=Aquifex aeolicus GN=aq_141 PE=4 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.783e-25 Identity = 58/117 (49.57%), Postives = 77/117 (65.81%), Query Frame = 2 Query: 80 IFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAK------QEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNGPPG 412 IF KI+ E+P+K VYEDDKVLAF DI P AP HILIIP K + G+ E ++G + Y A+ +A+ E L G+R+V N G + GQSVFH+H+HL+GGR+M+ PPG Sbjct: 7 IFCKIVRGEVPAKKVYEDDKVLAFHDINPVAPVHILIIP--KKHIMGIQTLEPEDECLVGHMFYVARKIAEDLGIAPDENLNKGYRLVFNVGKDAGQSVFHLHLHLIGGREMSWPPG 121
BLAST of FC929882 vs. ExPASy Swiss-Prot
Match: Y961_HAEIN (HIT-like protein HI0961 OS=Haemophilus influenzae GN=HI0961 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.589e-23 Identity = 57/109 (52.29%), Postives = 78/109 (71.56%), Query Frame = 2 Query: 77 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIP-KVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVHLLGGRQM 397 TIF KII KEIP+ +VY+D+ V AFRDI PQA THILIIP KV + +++ +E LGRL A +AK+EG+ EDG+R+++N +GGQ VFH+H+HL+GG + Sbjct: 5 TIFSKIIRKEIPANIVYQDELVTAFRDISPQAKTHILIIPNKVIPTVNDVTEQDE---VALGRLFSVAAKLAKEEGVAEDGYRLIVNCNKHGGQEVFHLHMHLVGGEPL 110
BLAST of FC929882 vs. ExPASy Swiss-Prot
Match: HITA_NEIGO (Protein hitA OS=Neisseria gonorrhoeae GN=hitA PE=4 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 8.722e-22 Identity = 48/102 (47.06%), Postives = 68/102 (66.67%), Query Frame = 2 Query: 80 IFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLG 385 IF KI KEIP++ VYED +++ F+DI P AP H+L+IPKV L+ A H +LG+++ +AK GL DGF+ +IN G GGQ VFH+H+H++G Sbjct: 5 IFCKIAAKEIPAQTVYEDGEMVCFKDINPAAPLHLLLIPKVH--FDSLAHAAPEHQPLLGKMMLKVPEIAKASGLTDGFKTLINTGKGGGQEVFHLHIHIMG 104 The following BLAST results are available for this feature:
BLAST of FC929882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929882 ID=FC929882; Name=FC929882; organism=Citrus clementina; type=EST; length=631bpback to top |