FC929888
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929888 vs. ExPASy Swiss-Prot
Match: STXB1_RAT (Syntaxin-binding protein 1 OS=Rattus norvegicus GN=Stxbp1 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.721e-21 Identity = 55/176 (31.25%), Postives = 103/176 (58.52%), Query Frame = 1 Query: 166 KQISRERLLYEMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSG-RSPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDERALEELFGDEENSRRGDACLNVMASRIA 690 K + E++++++++ K K WKVL++D+L+++++S CKM DI EG+++VEDI++RR+PLPS+EA+Y I P++++V +SD + Y+ A VFF+ L + K S I L E+N+ + +SQ + D + + + + ++ + L +A +IA Sbjct: 7 KAVVGEKIMHDVIKKVK---KKGEWKVLVVDQLSMRMLSSCCKMTDIMTEGITIVEDINKRREPLPSLEAVYLITPSEKSVHSLISDFKDPPTAKYRAAHVFFTDSCPDALFNELVK-SRAAKVIKTLTEINIAFLPYESQVYSLDSADSFQSFYSPHK-AQMKNPILERLAEQIA 177
BLAST of FC929888 vs. ExPASy Swiss-Prot
Match: STXB1_PONAB (Syntaxin-binding protein 1 OS=Pongo abelii GN=STXBP1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.721e-21 Identity = 55/176 (31.25%), Postives = 103/176 (58.52%), Query Frame = 1 Query: 166 KQISRERLLYEMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSG-RSPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDERALEELFGDEENSRRGDACLNVMASRIA 690 K + E++++++++ K K WKVL++D+L+++++S CKM DI EG+++VEDI++RR+PLPS+EA+Y I P++++V +SD + Y+ A VFF+ L + K S I L E+N+ + +SQ + D + + + + ++ + L +A +IA Sbjct: 7 KAVVGEKIMHDVIKKVK---KKGEWKVLVVDQLSMRMLSSCCKMTDIMTEGITIVEDINKRREPLPSLEAVYLITPSEKSVHSLISDFKDPPTAKYRAAHVFFTDSCPDALFNELVK-SRAAKVIKTLTEINIAFLPYESQVYSLDSADSFQSFYSPHK-AQMKNPILERLAEQIA 177
BLAST of FC929888 vs. ExPASy Swiss-Prot
Match: STXB1_MOUSE (Syntaxin-binding protein 1 OS=Mus musculus GN=Stxbp1 PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 6.721e-21 Identity = 55/176 (31.25%), Postives = 103/176 (58.52%), Query Frame = 1 Query: 166 KQISRERLLYEMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSG-RSPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDERALEELFGDEENSRRGDACLNVMASRIA 690 K + E++++++++ K K WKVL++D+L+++++S CKM DI EG+++VEDI++RR+PLPS+EA+Y I P++++V +SD + Y+ A VFF+ L + K S I L E+N+ + +SQ + D + + + + ++ + L +A +IA Sbjct: 7 KAVVGEKIMHDVIKKVK---KKGEWKVLVVDQLSMRMLSSCCKMTDIMTEGITIVEDINKRREPLPSLEAVYLITPSEKSVHSLISDFKDPPTAKYRAAHVFFTDSCPDALFNELVK-SRAAKVIKTLTEINIAFLPYESQVYSLDSADSFQSFYSPHK-AQMKNPILERLAEQIA 177
BLAST of FC929888 vs. ExPASy Swiss-Prot
Match: STXB1_HUMAN (Syntaxin-binding protein 1 OS=Homo sapiens GN=STXBP1 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.721e-21 Identity = 55/176 (31.25%), Postives = 103/176 (58.52%), Query Frame = 1 Query: 166 KQISRERLLYEMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSG-RSPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDERALEELFGDEENSRRGDACLNVMASRIA 690 K + E++++++++ K K WKVL++D+L+++++S CKM DI EG+++VEDI++RR+PLPS+EA+Y I P++++V +SD + Y+ A VFF+ L + K S I L E+N+ + +SQ + D + + + + ++ + L +A +IA Sbjct: 7 KAVVGEKIMHDVIKKVK---KKGEWKVLVVDQLSMRMLSSCCKMTDIMTEGITIVEDINKRREPLPSLEAVYLITPSEKSVHSLISDFKDPPTAKYRAAHVFFTDSCPDALFNELVK-SRAAKVIKTLTEINIAFLPYESQVYSLDSADSFQSFYSPHK-AQMKNPILERLAEQIA 177
BLAST of FC929888 vs. ExPASy Swiss-Prot
Match: STXB1_BOVIN (Syntaxin-binding protein 1 OS=Bos taurus GN=STXBP1 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.721e-21 Identity = 55/176 (31.25%), Postives = 103/176 (58.52%), Query Frame = 1 Query: 166 KQISRERLLYEMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSG-RSPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDERALEELFGDEENSRRGDACLNVMASRIA 690 K + E++++++++ K K WKVL++D+L+++++S CKM DI EG+++VEDI++RR+PLPS+EA+Y I P++++V +SD + Y+ A VFF+ L + K S I L E+N+ + +SQ + D + + + + ++ + L +A +IA Sbjct: 7 KAVVGEKIMHDVIKKVK---KKGEWKVLVVDQLSMRMLSSCCKMTDIMTEGITIVEDINKRREPLPSLEAVYLITPSEKSVHSLISDFKDPPTAKYRAAHVFFTDSCPDALFNELVK-SRAAKVIKTLTEINIAFLPYESQVYSLDSADSFQSFYSPHK-AQMKNPILERLAEQIA 177
BLAST of FC929888 vs. ExPASy Swiss-Prot
Match: STXB1_CHICK (Syntaxin-binding protein 1 OS=Gallus gallus GN=STXBP1 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.778e-21 Identity = 55/176 (31.25%), Postives = 103/176 (58.52%), Query Frame = 1 Query: 166 KQISRERLLYEMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSG-RSPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDERALEELFGDEENSRRGDACLNVMASRIA 690 K + E++++++++ K K WKVL++D+L+++++S CKM DI EG+++VEDI++RR+PLPS+EA+Y I P++++V +SD + Y+ A VFF+ L + K S I L E+N+ + +SQ + D + + + + ++ + L +A +IA Sbjct: 7 KAVVGEKIMHDVIKKVK---KKGEWKVLVVDQLSMRMLSSCCKMTDIMTEGITIVEDINKRREPLPSLEAVYLITPSEKSVHSLISDFKDPPTSKYRAAHVFFTDSCPDALFNELVK-SRAAKVIKTLTEINIAFLPSESQVYSLDSADSFQSFYSPHK-AQMKNPILERLAEQIA 177
BLAST of FC929888 vs. ExPASy Swiss-Prot
Match: SEC1_DICDI (Protein transport protein sec1 OS=Dictyostelium discoideum GN=sec1 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.357e-20 Identity = 55/160 (34.38%), Postives = 97/160 (60.62%), Query Frame = 1 Query: 160 NFKQISRERLLYEMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSGR-SPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDERALEELFGDE 636 + +++ ++R+L EM+R+ T + + WK LI+D+ +++++S C M DI +E V++VE I RQ LP++EAIYF+ PT +++ + ++D + SP Y +F +S + E+ S + RI +E+NLE+ AI+SQ F D L +LF + Sbjct: 4 SLRELCKDRILNEMVRTI-TPEASNGWKALIVDQDSLRVISACCGMFDIMEEKVTVVEKIDNPRQRLPNLEAIYFLTPTAQSIDLLINDFKKKSSPHYLAIHLFLTSKLP-EVEFKKLSASLAVHRIKTFKEINLEFLAIESQAFHLDQNNTLFQLFSPD 161
BLAST of FC929888 vs. ExPASy Swiss-Prot
Match: STXB3_HUMAN (Syntaxin-binding protein 3 OS=Homo sapiens GN=STXBP3 PE=1 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 3.688e-19 Identity = 49/152 (32.24%), Postives = 90/152 (59.21%), Query Frame = 1 Query: 238 WKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSGRSP-LYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDERALEELFG-DEENSRRGDACLNVMASRI 687 WK++++D+ T K+++ CKM D+ +EG+++VE+I++ R+P+ M+A+YFI PT ++V FL D + +S YK A+++F+ L IK ++ I +E+N+ + +SQ + D A + D N++ DA + MA +I Sbjct: 32 WKIMLLDEFTTKLLASCCKMTDLLEEGITVVENIYKNREPVRQMKALYFITPTSKSVDCFLHDFASKSENKYKAAYIYFTDFCPDNLFNKIK--ASCSKSIRRCKEINISFIPHESQVYTLDVPDAFYYCYSPDPGNAKGKDAIMETMADQI 181
BLAST of FC929888 vs. ExPASy Swiss-Prot
Match: STXB3_MOUSE (Syntaxin-binding protein 3 OS=Mus musculus GN=Stxbp3 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.817e-19 Identity = 48/152 (31.58%), Postives = 88/152 (57.89%), Query Frame = 1 Query: 238 WKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSGRS-PLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDERALEELFG-DEENSRRGDACLNVMASRI 687 WK++++D+ T K++S CKM D+ +EG++++E+I++ R+P+ M+A+YFI PT ++V FL D +S YK A+++F+ L IK ++ I +E+N+ + +SQ + D A + D N+ R + + MA +I Sbjct: 32 WKIMLLDEFTTKLLSSCCKMTDLLEEGITVIENIYKNREPVRQMKALYFISPTPKSVDCFLRDFGSKSEKKYKAAYIYFTDFCPDSLFNKIK--ASCSKSIRRCKEINISFIPQESQVYTLDVPDAFYYCYSPDPSNASRKEVVMEAMAEQI 181
BLAST of FC929888 vs. ExPASy Swiss-Prot
Match: ROP_DROME (Protein ROP OS=Drosophila melanogaster GN=Rop PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.391e-18 Identity = 49/141 (34.75%), Postives = 84/141 (59.57%), Query Frame = 1 Query: 208 SAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSGRS-PLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDERALEELF 627 ++ G W+VL++DKL ++++S KM +I+ EG++LVEDI+++R+PLP+M+AIY I P+ E+V + D + P+Y+ A VFF+ EL + K S +I L+E+N+ + + Q F D + L+ Sbjct: 29 TSAAGAGGMEWRVLVVDKLGMRMVSACTKMHEISAEGITLVEDINKKREPLPTMDAIYLITPSDESVRGLIRDFENPARPMYRYAHVFFTEVCPEELFNDLCK-SCAAGKIKTLKEINIAFLPYECQVFSLDSPDTFQCLY 168 The following BLAST results are available for this feature:
BLAST of FC929888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929888 ID=FC929888; Name=FC929888; organism=Citrus clementina; type=EST; length=692bpback to top |