FC929888
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929888 vs. ExPASy Swiss-Prot
Match: STXB2_PIG (Syntaxin-binding protein 2 (Fragment) OS=Sus scrofa GN=STXBP2 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.122e-18 Identity = 46/104 (44.23%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 166 KQISRERLLYEMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSGR-SPLYKKAFVFFS 474 K + E++L ++RS K WKVLIMD +++I+S CKM+DI EG+++VEDI++RR+P+PS+EAIY + PT+++V + D G + YK A VFF+ Sbjct: 7 KAVVGEKILSGVIRSVK---KDGEWKVLIMDHPSMRILSSCCKMSDILAEGITIVEDINKRREPIPSLEAIYLLSPTEKSVQALIXDFRGXPTXTYKAAHVFFT 107
BLAST of FC929888 vs. ExPASy Swiss-Prot
Match: SLY1_SCHPO (Protein sly1 OS=Schizosaccharomyces pombe GN=sly1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.024e-13 Identity = 49/161 (30.43%), Postives = 84/161 (52.17%), Query Frame = 1 Query: 196 EMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSGRSPLYKKAFVFFSSPISRELV---THIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDERALEELFGDEENSRRGDACLN 669 E+ S + ++ WKVLI DK + +S +++D+ + GV++ +I RQP+ + AIYF+QPT+EN+ + + D+S LY+ A+V FSS ISR L+ + + I + + L Y ++S F L ++F N +A +N Sbjct: 32 ELESSPQHASNFPIWKVLIFDKAGSETISSVLRISDLRKHGVTVHMNITSFRQPIADVPAIYFVQPTQENIELIIEDLS--KGLYESAYVCFSSTISRALLEQFAELASKTNTSHMIHQVYDQYLNYVVLESDFF----SLQLPKIFHTFHNPSSDEALIN 186
BLAST of FC929888 vs. ExPASy Swiss-Prot
Match: SCFD1_MOUSE (Sec1 family domain-containing protein 1 OS=Mus musculus GN=Scfd1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.305e-11 Identity = 38/144 (26.39%), Postives = 75/144 (52.08%), Query Frame = 1 Query: 172 ISRERLLYEMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSGRSPLYKKAFVFFSSPISR---ELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFV 594 ++ +R+L + K T + WKVLI D+ I+S + ++ G++L +H R P+P + A+YF+ PT+EN+ D+ R+ LY+ ++ F S ISR E + + ++ + ++ + + L + ++ FV Sbjct: 18 VALKRMLNFNVPHVKNSTGEPVWKVLIYDRFGQDIISPLLSVKELRDMGITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRLCQDL--RNQLYESYYLNFISAISRSKLEDIANAALAASAVTQVAKVFDQYLNFITLEDDMFV 159
BLAST of FC929888 vs. ExPASy Swiss-Prot
Match: SCFD1_HUMAN (Sec1 family domain-containing protein 1 OS=Homo sapiens GN=SCFD1 PE=1 SV=4) HSP 1 Score: 67.3958 bits (163), Expect = 8.235e-11 Identity = 38/144 (26.39%), Postives = 75/144 (52.08%), Query Frame = 1 Query: 172 ISRERLLYEMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSGRSPLYKKAFVFFSSPISR---ELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFV 594 ++ +R+L + K T + WKVLI D+ I+S + ++ G++L +H R P+P + A+YF+ PT+EN+ D+ R+ LY+ ++ F S ISR E + + ++ + ++ + + L + ++ FV Sbjct: 21 VALKRMLNFNVPHIKNSTGEPVWKVLIYDRFGQDIISPLLSVKELRDMGITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDL--RNQLYESYYLNFISAISRSKLEDIANAALAASAVTQVAKVFDQYLNFITLEDDMFV 162 The following BLAST results are available for this feature:
BLAST of FC929888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929888 ID=FC929888; Name=FC929888; organism=Citrus clementina; type=EST; length=692bpback to top |