FC929889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: SSY1_WHEAT (Starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum GN=WSSI-2 PE=2 SV=2) HSP 1 Score: 183.341 bits (464), Expect = 1.039e-45 Identity = 98/230 (42.61%), Postives = 141/230 (61.30%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ--ALAEMMKNGMAQDLSWKGPAKKWEE 684 VNG+D+ +WNP TDK + Y + K K LQ E+GLPV ++P+IGFIGRL+ QKG D++ AIP ++E+VQ ++LG+G E + E Y +K RG F++P++H I AG D +L+PSRFEPCGL QL+AM+YGTVP+V TGGL DTVE F F A P+ V + +R A++T+ + +MK GM +D +W A+++E+ Sbjct: 407 VNGIDINDWNPTTDKCLPHHYSVDD-LSGKAKCKAELQKELGLPVREDVPLIGFIGRLDYQKGIDLIKMAIPELMREDVQFVMLGSGDPIFEGWMRSTESSYKDKFRGWVGFSVPVSHRITAGCDILLMPSRFEPCGLNQLYAMQYGTVPVVHGTGGLRDTVET-FNPFGAKGEEGTGWAFSPLTVDKMLWALRTAMSTFREHKPSWEGLMKRGMTKDHTWDHAAEQYEQ 634
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: SSY21_ORYSJ (Soluble starch synthase 2-1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-1 PE=2 SV=2) HSP 1 Score: 182.57 bits (462), Expect = 1.772e-45 Identity = 105/237 (44.30%), Postives = 140/237 (59.07%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIG----VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 693 VNG+D +WNP D ++ Y TV K K ALQ E+GLPV ++PVI FIGRL+ QKG D++A A+P ++VQ+I+LGTG++ +E L +LE + ++ RG F+I LAH + AGAD +L+PSRFEPCGL QL+AM YGTVP+V + GGL DTVE + +G EA +D R T + + K GM QDLSW AK +EE LL Sbjct: 511 VNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELGLPVRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTGRQDLEDTLRRLESQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGGLRDTVEHYNPYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRT----SWEGLQKRGMMQDLSWDNAAKLYEEVLL 743
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: SSG2_PEA (Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.314e-45 Identity = 97/237 (40.93%), Postives = 143/237 (60.34%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIG----VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGMAQDLSWKGPAKKWEETLL 693 VNG+D ++WNP D Y+ Y+ T+ K K ALQ E+GLPV ++P+I FIGRL+ QKG D++A AIP + +VQ+++LGTG+ +E+ L++ E + +K R F++ +AH I AG+D +L+PSRFEPCGL QL+AM YGTVP+V GGL DTV+ F F D + + + L TY ++ + + GM+QDLSW A+++EE L+ Sbjct: 514 VNGVDTKDWNPQFDAYLTSDGYTNYNLKTLQTGKRQCKAALQRELGLPVREDVPIISFIGRLDHQKGVDLIAEAIPWMMSHDVQLVMLGTGRADLEQMLKEFEAQHCDKIRSWVGFSVKMAHRITAGSDILLMPSRFEPCGLNQLYAMSYGTVPVVHGVGGLRDTVQP-FNPFDESGVG---WTFDRAEANKLMAALWNCLLTYKDYKKSWEGIQERGMSQDLSWDNAAQQYEEVLV 746
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: SSY22_ORYSJ (Soluble starch synthase 2-2, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-2 PE=2 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 9.721e-44 Identity = 101/239 (42.26%), Postives = 144/239 (60.25%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIG----VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT--QALAEMMKNGMAQDLSWKGPAKKWEETLL 693 VNG+D+ EWNP D+++ Y T+ K KEALQ ++GL V ++P+IGFIGRL+ QKG DI+ A+P ++VQ+++LGTG+ +E+ L + E + +K RG F++ LAH I AGAD +L+PSRFEPCGL QL+AM YGTVP+V + GGL DTV + F +G EA +D + L TY ++ + GMAQDLSW A+ +E+ L+ Sbjct: 456 VNGIDMAEWNPEVDEHLQSDGYANYTFETLDTGKKQCKEALQRQLGLQVRDDVPLIGFIGRLDHQKGVDIIGDAMPWIAGQDVQVVMLGTGRPDLEEMLRRFESEHNDKVRGWVGFSVQLAHRITAGADVLLMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTVAPFDPFADTGLGWTFDRAEANRMID------ALGHCLNTYRNYKESWRGLQARGMAQDLSWDHAAELYEDVLV 688
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: SSY23_ORYSI (Soluble starch synthase 2-3, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=SSII-3 PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.301e-43 Identity = 96/237 (40.51%), Postives = 143/237 (60.34%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIG----VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGMAQDLSWKGPAKKWEETLL 693 VNG+D +EWNP D ++ Y +++ KP K ALQ E+GL V ++P+IGFIGRL+ QKG DI+ A+P ++VQ+++LG+G++ +E L++ E + K RG F++ +AH I AGAD +++PSRFEPCGL QL+AM YGTVP+V + GGL DTV F F+ + +P + + L TY ++ + GM+QDLSW A+ +EE L+ Sbjct: 572 VNGIDYREWNPEVDVHLQSDGYANYTVASLDSGKPRCKAALQRELGLEVRDDVPLIGFIGRLDGQKGVDIIGDAMPWIAGQDVQLVLLGSGRRDLEVMLQRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTV-SAFDPFEDTGLGWTFDRAEP---HKLIEALGHCLETYRKYKESWRGLQVRGMSQDLSWDHAAELYEEVLV 804
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: SSY23_ORYSJ (Soluble starch synthase 2-3, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-3 PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.075e-42 Identity = 95/237 (40.08%), Postives = 144/237 (60.76%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIG----VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGMAQDLSWKGPAKKWEETLL 693 VNG+D +EWNP D ++ Y +++ +KP K ALQ E+GL V ++P+IGFIGRL+ QKG DI+ A+P ++VQ+++LG+G++ +E L++ E + K RG F++ +AH I AGAD +++PSRFEPCGL QL+AM YGTVP+V + GGL DT+ F F+ + +P + + L TY ++ + GM+QDLSW A+ +EE L+ Sbjct: 572 VNGIDYREWNPEVDVHLQSDGYANYTVASLDSSKPRCKAALQRELGLEVRDDVPLIGFIGRLDGQKGVDIIGDAMPWIAGQDVQLVLLGSGRRDLEVMLQRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTM-SAFDPFEDTGLGWTFDRAEP---HKLIEALGHCLETYRKYKESWRGLQVRGMSQDLSWDHAAELYEEVLV 804
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: GLGA2_NITOC (Glycogen synthase 2 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=glgA2 PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.647e-41 Identity = 97/236 (41.10%), Postives = 134/236 (56.78%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV---------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKW 678 +NG D Q W+P D +I +YD T K K ALQ GLP D +PV+GF+GRL EQKG D++ A+P + E +Q++ LG G++ + L+QL YP + ++ LAH + AGAD L+PSRFEPCGL QL+A+RYGTVPI TGGL DT+ +E TGF S +A+ T ++RALA Y ++ + GMAQ+ SW+ AK + Sbjct: 248 LNGADYQRWDPRHDPFIEKRYD-QTCWSHKASNKLALQRRYGLPEDDTLPVLGFVGRLVEQKGIDLILGALPKLLAEKIQVVFLGEGEERHQNALQQLASRYPNQIGVSISYDERLAHGVQAGADIFLMPSRFEPCGLTQLYALRYGTVPIARRTGGLSDTIVDATEKNLRQELATGFTFTESS----------PSALLTAIQRALACYAQSRQWRRLALTGMAQNFSWQTSAKAY 472
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: GLGA_ANADF (Glycogen synthase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=glgA PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.457e-41 Identity = 92/228 (40.35%), Postives = 140/228 (61.40%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWE 681 +NG+DV+EW+P TD+++ +Y A+ + K K ALQ E+GLP ++P++ IGRL EQKG D++ AA+ + ++Q+++LGTG+ +E+ + P++ F+ LAH + AGAD L+PSRFEPCGL Q++++RYGT+P+V + GGL DTVE+ F G+ G+ P A+ VRRAL + +A MM GMA D SW A+ +E Sbjct: 245 LNGIDVEEWDPATDRHLPARYSAAD-LSGKAACKSALQRELGLPERPDVPLVAMIGRLAEQKGLDLVVAALGELLARDLQLVLLGTGRPELEEAFRRAARERPDRMAARIGFDEGLAHRMEAGADLFLMPSRFEPCGLNQMYSLRYGTIPVVRAVGGLEDTVED-FDGWSRGT-GFKFRDYHP---QAMLLAVRRALEAHRDRRAWRAMMLRGMALDFSWDRSAQAYE 466
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: GLGA_THEYD (Glycogen synthase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=glgA PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.897e-41 Identity = 94/229 (41.05%), Postives = 128/229 (55.90%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT-QALAEMMKNGMAQDLSWKGPAKKWEE 684 +NG+D + WNP D +I KY + D K KE L A G+ P+I FIGR+ QKG DI+ A+P+ IK + I GTG+ E ++ +L+ YP K F+ LAH I AGAD +L+PSR+EPCGL QL AMRYGT+PI TGGL DTVE+ TGF +S +A++ + R + Y Q EM++ M +D SW +KK+ E Sbjct: 264 INGIDYKIWNPEEDPFIAKKYGLQNIND-KQKNKEDLIALAGINSSLQDPIIAFIGRMVYQKGIDIVVDAMPNLIKNGISFIFEGTGESYYEHKIRELQNSYPSKVFAFIGFDEALAHKIYAGADSLLVPSRYEPCGLSQLIAMRYGTIPICRKTGGLSDTVEDKVTGFLFSEYS----------SSALTHAISRFIEIYNNKQKFLEMIREAMKRDFSWSNSSKKYIE 481
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: GLGA_ANAD2 (Glycogen synthase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=glgA PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.897e-41 Identity = 94/228 (41.23%), Postives = 137/228 (60.09%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWE 681 +NG+DV W+P D ++ + A + K K ALQ EVGLPV +PV G + RL EQKG D++AAA+P + +VQ+++LG+G E+ + +P++ F+ LAH I AGAD L+PSRFEPCGL Q++++RYGTVP+V + GGL DTVE+ F GF G+ E A+ T RRAL + +A +++ GMA+D SW+ A ++E Sbjct: 246 LNGIDVHAWDPARDPHLPAHFGAGD-LTGKAACKAALQREVGLPVRPEVPVAGLVTRLAEQKGIDLVAAALPALLARDVQVVLLGSGDAAYEQAFARAAREHPDRVAARIGFDEGLAHRIEAGADLFLMPSRFEPCGLNQMYSLRYGTVPVVRAVGGLADTVED-FDGFARGTGFRFSEYTP----QALLTATRRALDVFRDRRAWRGLVERGMAEDNSWERSAARYE 467 The following BLAST results are available for this feature:
BLAST of FC929889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 364
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929889 ID=FC929889; Name=FC929889; organism=Citrus clementina; type=EST; length=695bpback to top |