FC929889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: GLGA_METJA (Probable glycogen synthase OS=Methanocaldococcus jannaschii GN=glgA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.286e-19 Identity = 45/122 (36.89%), Postives = 77/122 (63.11%), Query Frame = 1 Query: 124 GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI-KENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 486 G+ D P+IGF+GR QKG + + AIP + K +++ + L G + +E++L+ L + + + +++PL+ ++ AG+D+I++PS +EPCGL+Q+ AM Y T I TGGL DT+ Sbjct: 290 GVDGDIETPLIGFVGRATHQKGFNTMFEAIPELLEKHDIRFVFLTKGDRDIEERLKNLANEHDGRILALIGYSLPLSSLVFAGSDWIIMPSYWEPCGLVQMEAMAYCTPVIATETGGLKDTI 411
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: MOK12_SCHPO (Cell wall alpha-1,3-glucan synthase mok12 OS=Schizosaccharomyces pombe GN=mok12 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.335e-13 Identity = 59/161 (36.65%), Postives = 85/161 (52.80%), Query Frame = 1 Query: 13 DVQEWNPLTDKYIGVKYDASTVMDAK-PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGT-----GKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL 474 D++ N LTD + V + V++AK LLK+ Q L VD + ++ F+GR QKG D++A P + E NVQ+I +G G+ EK LEQ+ +P + F + + AG DF LIPSR EP GL+ + R G + I + TGGL Sbjct: 1423 DLKLLNHLTDDPVDVDF----VLEAKRKLLKKQTQEWANLDVDPSAQLLVFVGRWSHQKGIDLIADLAPKLLTEHNVQLITIGPVIDLHGQFAAEK-LEQIAKRFPTRVLCKPVFTA-VPPFLFAGTDFALIPSRDEPFGLVAVEFGRKGVLCIGSRTGGL 1577
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: MOK14_SCHPO (Cell wall alpha-1,3-glucan synthase mok14 OS=Schizosaccharomyces pombe GN=mok14 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.752e-12 Identity = 54/157 (34.39%), Postives = 77/157 (49.04%), Query Frame = 1 Query: 100 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGT-----GKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD------TVEEGFTGFQMGSFSVDC 534 K Q GL +D ++ F+GR QKG DILA P +++ N+Q+IV+G GK EK + +E YP + +F + L I GADF LIPSR EP GL+ + R G + I + GGL + +VE T + + C Sbjct: 532 KRKAQEWAGLTIDDEADLLVFVGRWSVQKGIDILADLAPTLLEKFNIQLIVVGPLIDLYGKFAAEKFMYIME-RYPGRVFSKPEF-VHLPPFIFEGADFALIPSRDEPFGLVAVEFGRRGAICIGSRVGGLGEMPGWWYSVESSSTAYLLKQLEKSC 686
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: AGS1_SCHPO (Cell wall alpha-1,3-glucan synthase ags1 OS=Schizosaccharomyces pombe GN=ags1 PE=1 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 7.512e-12 Identity = 62/184 (33.70%), Postives = 86/184 (46.74%), Query Frame = 1 Query: 37 TDKYIGVKYDASTVMD-----AKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGT-----GKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD------TVEEGFTGFQMGSFSVDCE 537 TD+ + K A T +D +K K Q GL V+ ++ F+GR QKG D++A P ++ VQ+I +G GK EK L+ L+ YP + KF L I +GADF LIPSR EP GL+ + R G + I A GGL +VE T + F C+ Sbjct: 1396 TDEIVDDKAVAITDIDPDMEKSKVEHKRLAQEWAGLEVNEKYDLLVFVGRWSSQKGIDLIADIAPSLLESYKVQLICVGPIIDLYGKFAAEK-LDVLQKKYPTRVFSQPKFT-QLPPYIFSGADFALIPSRDEPFGLVAVEFGRKGALGIGARVGGLGQMPGWWYSVESSATPHLLKQFEQACQ 1577 The following BLAST results are available for this feature:
BLAST of FC929889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 364
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929889 ID=FC929889; Name=FC929889; organism=Citrus clementina; type=EST; length=695bpback to top |