FC929889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: GLGA_THELT (Glycogen synthase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=glgA PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.673e-38 Identity = 88/228 (38.60%), Postives = 135/228 (59.21%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA--LAEMMKNGMAQDLSWKGPAKKW 678 +NG+D E+NP TDK I V YD + + K + K LQ E+ L V ++P+IG I RL +QKG D++ + + + ++Q +VLGTG K E+ + +E YP+K KF++ LA I A +D L+PSR+EPCGL Q++++RYGTVPIV TGGL D+V+E + + + D A + TV +A+ Y + +++KN M D+SW AK++ Sbjct: 251 LNGIDYSEYNPATDKRIYVNYDIDHI-EKKKMNKSELQKELNLQVRDDVPLIGMINRLVDQKGLDLIEKIVDYMMMFDIQFVVLGTGDKKYEEFFKNIEKKYPQKISSNMKFDVDLAQKIYAASDMFLMPSRYEPCGLGQMYSLRYGTVPIVRYTGGLADSVKE----YDPKTRDGNGFGFREYDTAHLLETVAKAVYFYKKEKDHWGKVVKNAMKTDVSWDRSAKQY 473
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: GLGA_ACICJ (Glycogen synthase OS=Acidiphilium cryptum (strain JF-5) GN=glgA PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.673e-38 Identity = 90/236 (38.14%), Postives = 127/236 (53.81%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKW 678 +NG+D WNP TD+++ +YD + + A+ + K A+QA +GL D + G + RL QKG D++ A+P Q+ VLGTG+ +E L + P + + F L+H+I GAD IL+PSRFEPCGL QL A RYG +P+V+ GGLVDTV + TG Q G PV A +S +RR A Y + M +N MA D+SW PA+ + Sbjct: 245 LNGLDTATWNPATDEHLAARYDVANLA-ARAVNKRAVQARMGLAPDPRALLFGVVSRLAGQKGIDLIIEALPVLDALGAQLAVLGTGETGIEASLREAVAARPGRVAAIIGFEESLSHLIQGGADAILVPSRFEPCGLTQLAAQRYGAIPVVSLVGGLVDTVIDANPVAISAGVATGIQFG----------PVSEAGLSDGLRRTAALYADPDKWSRMQRNAMALDVSWTEPARNY 469
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: GLGA_THESQ (Glycogen synthase OS=Thermotoga sp. (strain RQ2) GN=glgA PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.103e-38 Identity = 92/228 (40.35%), Postives = 130/228 (57.02%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA--LAEMMKNGMAQDLSWKGPAKKW 678 +NG+D + +NP TD+YI V YD + ++ K K LQ E+GLPV++ V G I RL QKG D+L + + + ++QI+VLGTG + E + + YP+K KF++ LA I AGAD L+PSR+EPCGL Q+ +MRYGT+P+V TGGL DTV+E + S D A + V +AL Y + +M N M DLSW AK++ Sbjct: 251 LNGIDYELYNPATDRYIYVNYDVNR-LELKWENKVKLQEELGLPVNKETAVAGLISRLVPQKGLDLLVDVMDYLMLFDLQIVVLGTGDEQYENAFRKFQERYPDKVSANIKFDVELAQKIYAGADIFLMPSRYEPCGLGQMFSMRYGTIPVVRYTGGLADTVKE----YDPQSMEGTGFGFKKYDSAHLLKAVSKALHFYYREKDHWRRIMTNAMNTDLSWDRSAKEY 473
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: GLGA_THEP1 (Glycogen synthase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=glgA PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.103e-38 Identity = 92/228 (40.35%), Postives = 130/228 (57.02%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA--LAEMMKNGMAQDLSWKGPAKKW 678 +NG+D + +NP TD+YI V YD + ++ K K LQ E+GLPV++ V G I RL QKG D+L + + + ++QI+VLGTG + E + + YP+K KF++ LA I AGAD L+PSR+EPCGL Q+ +MRYGT+P+V TGGL DTV+E + S D A + V +AL Y + +M N M DLSW AK++ Sbjct: 251 LNGIDYELYNPATDRYIYVNYDVNR-LELKWENKVKLQEELGLPVNKETAVAGLISRLVPQKGLDLLVDVMDYLMLFDLQIVVLGTGDEQYENAFRKFQERYPDKVSANIKFDVELAQKIYAGADIFLMPSRYEPCGLGQMFSMRYGTIPVVRYTGGLADTVKE----YDPQSMEGTGFGFKKYDSAHLLKAVSKALHFYYREKDHWRRIMTNAMNTDLSWDRSAKEY 473
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: SSY3_SOLTU (Soluble starch synthase 3, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS3 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.970e-38 Identity = 92/238 (38.66%), Postives = 132/238 (55.46%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQ-----LEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDT---VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEE 684 VNG+D W+PL DK+I + Y + V++ K KEALQ ++GL ++P++G I RL QKG ++ AI ++ N Q+++LG+ P + QL Y ++AR ++ PL+H+I AGADFIL+PS FEPCGL QL AMRYG++P+V TGGL DT V+ Q + + D D V + RAL+ + G + K M QD SW PA + E Sbjct: 985 VNGIDPDIWDPLNDKFIPIPYTSENVVEGKTAAKEALQRKLGLK-QADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRVQNNFVNLANQLHSKYNDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQQCGLEPNGFSFDGADAGGVDYALNRALSAWYDGRDWFNSLCKQVMEQDWSWNRPALDYLE 1221
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: GLGA1_GEOMG (Glycogen synthase 1 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=glgA1 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.970e-38 Identity = 91/236 (38.56%), Postives = 134/236 (56.78%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT--YGTQALAEMMKNGMAQDLSWKGPAKKWEE 684 +NG+D ++WNP D YI +Y A+ + K L K LQ GLP ++P+ G + RL +QKG DILA AI + +VQ ++LG G+ ++ YP+K +N PL+H I AGADF L+PS FEPCGL Q++++RYGT+PIV +TGGL D+VE TGF+ S D A+ TV A+ T + A+ ++ N MA+ +W+ A ++E+ Sbjct: 256 LNGVDYEDWNPEVDPYIAARYSAAD-LSGKKLCKRDLQRTFGLPERDDVPLFGMVSRLVKQKGVDILAEAIHRILALDVQFVMLGAGEPWTHFYFGDIKNAYPDKFNIFVGYNNPLSHQIEAGADFFLMPSAFEPCGLNQMYSLRYGTLPIVRATGGLDDSVENFDEKTLVGTGFKFWS----------RDAGALFDTVGWAVHTWYHRKDAMERLIANAMAKRFTWEDAAARYED 480
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: GLGA_THEMA (Glycogen synthase OS=Thermotoga maritima GN=glgA PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.041e-37 Identity = 92/228 (40.35%), Postives = 129/228 (56.58%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA--LAEMMKNGMAQDLSWKGPAKKW 678 +NG+D + +NP TD+YI V YD + ++ K K LQ E+GLPV++ V G I RL QKG D+L + + ++QI+VLGTG + E + + YP+K KF++ LA I AGAD L+PSR+EPCGL Q+ +MRYGT+P+V TGGL DTV+E + S D A + V +AL Y + +M N M DLSW AK++ Sbjct: 251 LNGIDYELYNPATDRYIYVNYDVNR-LELKWENKVKLQEELGLPVNKETAVAGLISRLVPQKGLDLLVDVMDYLTLFDLQIVVLGTGDEQYENAFRKFQERYPDKVSANIKFDVELAQKIYAGADIFLMPSRYEPCGLGQMFSMRYGTIPVVRYTGGLADTVKE----YDPQSMEGTGFGFKKYDSAHLLKAVSKALHFYYREKDHWRRIMTNAMNTDLSWDRSAKEY 473
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: GLGA_RHORT (Glycogen synthase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=glgA PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.041e-37 Identity = 86/227 (37.89%), Postives = 124/227 (54.63%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKW 678 +NG+D WNP TD Y+ D + K + K+ L+ +GL D + P+ G + R QKG D++ AA+P I Q+ +LG G +E L + YP A ++ LAH+I ADF+L+PSRFEPCGL QL+A+RYGT+P+V TGGL D+V G D D A+ + RA+ Y +A L ++ + GM+QD SWK AK++ Sbjct: 249 LNGIDSNAWNPQTDPYLAAPIDGADPAPGKRINKDMLKRRMGLDADGDRPLFGLVSRFVAQKGIDLVVAALPGMIAGGAQVAILGAGDTGLEAALNDIVGRYPGAAAVHVGYDEHLAHLIEGAADFLLVPSRFEPCGLTQLYALRYGTIPVVRRTGGLADSVSHLDDGPNGTGIVFDHALPD-----ALEWAIGRAMTLYRDKATLNKVRQRGMSQDFSWKRSAKEY 470
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: GLGA_BACC1 (Glycogen synthase OS=Bacillus cereus (strain ATCC 10987) GN=glgA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.360e-37 Identity = 93/222 (41.89%), Postives = 127/222 (57.21%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSW 657 VNG+D +NP TD YI +YDA ++ + K K ALQ GLP + P+I + RL +QKG D++ ++E+VQ I+LG+G EK E + YPEK + FN LAH + AG+D L+PS FEPCGL QL A+ YGT+PIV TGGL DTV+ + TG G + A D + TVRRA+ Y + + E ++K M +D SW Sbjct: 246 VNGIDTSVYNPETDSYITAQYDADSLYE-KSKNKRALQRYFGLPEKEDTPIISMVTRLTKQKGLDLVRTVFREIMEEDVQCIILGSGDSEYEKFFEWMAYEYPEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVQSYDEETGEGNGFSFTNFNAHDMLH------TVRRAIEFYHDKPVWEQLVKQAMTEDYSW 460
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: GLGA_EXIS2 (Glycogen synthase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=glgA PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.319e-37 Identity = 85/227 (37.44%), Postives = 133/227 (58.59%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSW 657 +NG+D ++++P TD+++ YD TV + K K ALQ E+GLPV+ ++P+ GF+ RL +QKG D+LA +P + + Q I+LG+G+ E + + P+K F++ LA I AG+D L+PSRFEPCGL QL +M+YG++PIV TGGL DTV+ EG GF +++ E +D ++R + TY + +++ M +D SW Sbjct: 249 LNGIDYRQFSPETDEHLVENYDVKTVEEGKAANKAALQQELGLPVNPDVPLFGFVSRLVDQKGIDLLAHILPDLFELDAQFIILGSGEAEYEGLFQHASTIRPDKVASYIGFDVGLAQRIYAGSDAFLMPSRFEPCGLSQLISMKYGSLPIVRETGGLRDTVQPFNQFTLEG-NGFSFSNYNAQ-EFLD---------AIKRTIETYHDKPVFKHLIETAMQEDFSW 464 The following BLAST results are available for this feature:
BLAST of FC929889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 364
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929889 ID=FC929889; Name=FC929889; organism=Citrus clementina; type=EST; length=695bpback to top |