FC929899

Overview
NameFC929899
Unique NameFC929899
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_KLULA (Phosphoenolpyruvate carboxykinase [ATP] OS=Kluyveromyces lactis GN=PCK1 PE=3 SV=2)

HSP 1 Score: 267.314 bits (682), Expect = 5.330e-71
Identity = 128/227 (56.39%), Postives = 162/227 (71.37%), Query Frame = 2
Query:   11 LWWGKGSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMP-KRQILSLHSGCNMG-KDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            +WWG    N    E T+ +NRERA DYL + D +++ D +  WDP+ R+KVR+V ARAYH+LFM NM IRP+ EELENFG PDFT++NAGQFP N +T  MTS T++++N  + EMVILGT+YAGEMKKG+F+VM YLMP    +L+LHS  N G +D DV                D +R LIGDDEHCW D+GV NIEGGCYAKC+ LS EKEP+I+NA +FG+V
Sbjct:   81 VWWGP--VNKPCSERTWEINRERAADYLRTRDHIYIVDAYAGWDPRYRIKVRVVCARAYHALFMTNMLIRPSKEELENFGEPDFTVWNAGQFPANTHTSGMTSKTTVEINFKQMEMVILGTEYAGEMKKGIFTVMFYLMPVNHNVLTLHSSANQGIQDNDVTLFFGLSGTGKTTLSADPHRLLIGDDEHCWSDHGVFNIEGGCYAKCLGLSAEKEPEIFNAIKFGSV 305          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_YEAST (Phosphoenolpyruvate carboxykinase [ATP] OS=Saccharomyces cerevisiae GN=PCK1 PE=1 SV=2)

HSP 1 Score: 264.233 bits (674), Expect = 4.512e-70
Identity = 127/228 (55.70%), Postives = 163/228 (71.49%), Query Frame = 2
Query:    8 ELWWGKGSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMP-KRQILSLHSGCNMG-KDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            E+WWG    N    E T+ +NRERA DYL + D +++ D F  WDP+ R+KVR+V ARAYH+LFM NM IRPT EEL +FG PDFT++NAGQFP N +T  M+S ++I++N    EM+ILGT+YAGEMKKG+F+VM YLMP    +L+LHS  N G ++GDV                D +R LIGDDEHCW D+GV NIEGGCYAKCI+LS EKEP+I++A +FG+V
Sbjct:   86 EIWWGP--VNKPCSERTWSINRERAADYLRTRDHIYIVDAFAGWDPKYRIKVRVVCARAYHALFMTNMLIRPTEEELAHFGEPDFTVWNAGQFPANLHTQDMSSKSTIEINFKAMEMIILGTEYAGEMKKGIFTVMFYLMPVHHNVLTLHSSANQGIQNGDVTLFFGLSGTGKTTLSADPHRLLIGDDEHCWSDHGVFNIEGGCYAKCINLSAEKEPEIFDAIKFGSV 311          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_EMENI (Phosphoenolpyruvate carboxykinase [ATP] OS=Emericella nidulans GN=acuF PE=3 SV=2)

HSP 1 Score: 262.692 bits (670), Expect = 1.313e-69
Identity = 129/229 (56.33%), Postives = 162/229 (70.74%), Query Frame = 2
Query:    2 EHELWWGKGSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMP-KRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            E E+WWG    N  M    + +NRERAVDYLN+ ++++V D F  WD + R+ VR+V ARAYH+LFM NM IRP+ EEL++F  PD+ IYNAG FP NR+T  MTS+TS+ +N A +EMVILGT+YAGEMKKG+F+++ Y MP K  +L+LHS  N G++GDV                D  R LIGDDEHCW D GV NIEGGCYAKCI LS EKEPDI+NA +FG+V
Sbjct:   94 EKEVWWGP--VNKPMTPDVWRINRERAVDYLNTRNRIYVIDGFAGWDERYRISVRVVCARAYHALFMRNMLIRPSAEELKHFH-PDYVIYNAGSFPANRFTEGMTSATSVAINFAEKEMVILGTEYAGEMKKGVFTILFYEMPVKHNVLTLHSSANEGQNGDVTVFFGLSGTGKTTLSADPKRALIGDDEHCWTDRGVFNIEGGCYAKCIGLSAEKEPDIFNAIRFGSV 319          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_ASHGO (Phosphoenolpyruvate carboxykinase [ATP] OS=Ashbya gossypii GN=PCK1 PE=3 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 4.988e-69
Identity = 123/226 (54.42%), Postives = 158/226 (69.91%), Query Frame = 2
Query:   11 LWWGKGSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMP-KRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            +WWG    N +  E T+L+NRERA D+L + + +++ D +  WDP+ R+K+RIV  RAYH+LFM NM IRPT EEL  FG PDFT++NAGQFP N +T  M+S T++++N    EMVILGT+YAGEMKKG+F+VM YLMP    +L+LHS  N G + DV                D +R LIGDDEHCW D GV NIEGGCYAKCI LS EKEP+I+NA ++G+V
Sbjct:   81 IWWGP--VNRKASEKTWLINRERAADFLRTREHLYIVDAYAGWDPRYRIKIRIVCCRAYHALFMTNMLIRPTEEELAEFGEPDFTVWNAGQFPANTHTEGMSSKTTVEINFRAMEMVILGTEYAGEMKKGIFTVMFYLMPINHNVLTLHSSANQGPNNDVTLFFGLSGTGKTTLSADQHRKLIGDDEHCWSDYGVFNIEGGCYAKCIGLSGEKEPEIFNAIKYGSV 304          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_TRYCR (Phosphoenolpyruvate carboxykinase [ATP], glycosomal OS=Trypanosoma cruzi GN=PEPCK PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.487e-52
Identity = 106/223 (47.53%), Postives = 142/223 (63.68%), Query Frame = 2
Query:   17 WGKGSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            WGK   N+++ E +F   R+ A ++L++ + +FV D F   D + R+KVR+ + R YH+LFM +M I PTPEEL  FG PD+ IYNAG+   +     +TS+T + LN   RE VILGT+YAGEMKKG+ +VM  LMP+   L +H+  N+GK GDV                D +R LIGDDEH W D GV NIEGGCYAK I L+ + E DI++A +FGAV
Sbjct:   62 WGK--VNMKLSEESFARVRKIAKEFLDTREHLFVVDCFAGHDERYRLKVRVFTTRPYHALFMRDMLIVPTPEELATFGEPDYVIYNAGECKADPSIPGLTSTTCVALNFKTREQVILGTEYAGEMKKGILTVMFELMPQMNHLCMHASANVGKQGDVTVFFGLSGTGKTTLSADPHRNLIGDDEHVWTDRGVFNIEGGCYAKAIGLNPKTEKDIYDAVRFGAV 282          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_TRYBB (Phosphoenolpyruvate carboxykinase [ATP], glycosomal OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.248e-52
Identity = 107/220 (48.64%), Postives = 137/220 (62.27%), Query Frame = 2
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            GS N+++ E +F   +  A DY  +   +FV D F   D + R+KVR+ + R YH+LFM NM I PT EEL++FG PD+ IYNAG+   +     +TS+TS+ LN   RE VILGT+YAGEMKKG+ +VM  LMP+   L +H+  N+GK GDV                D  R LIGDDEH W D GV NIEGGCYAK I L+ E E DI+ A +FGAV
Sbjct:   63 GSVNMKLTEESFEKLKTIAKDYFATCKHLFVMDCFAGHDERYRLKVRVYTTRPYHALFMRNMLIVPTLEELQSFGEPDYVIYNAGEAKADPTVPGVTSTTSVALNFKTREQVILGTEYAGEMKKGILTVMFELMPRMGHLCMHASANVGKSGDVTVFFGLSGTGKTTLSADPRRNLIGDDEHVWTDRGVFNIEGGCYAKAIGLNPETEKDIYEAVRFGAV 282          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_THETN (Phosphoenolpyruvate carboxykinase [ATP] OS=Thermoanaerobacter tengcongensis GN=pckA PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 9.781e-49
Identity = 97/226 (42.92%), Postives = 141/226 (62.39%), Query Frame = 2
Query:    8 ELWWGKGSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            ++WW    P I +++   L NR   + YL + D +F+ D F+  DPQ RV +R+++  AY SL    + IRPT +EL+NF  P++T+  A +F        + S   I L+  ++ ++I GTQY GE+KK +F++M+YLMPK+ +LS+H   N+GKDGD A               D  R+LIGDDEH W + G+ N EGGCYAKCI+LSREKEP IW++ +FGA+
Sbjct:   68 DIWWENNKP-ISVEKFEKLYNR--LIAYLQNRD-LFIFDGFVGADPQYRVSIRVITEYAYQSLMARQLFIRPTEKELQNF-VPEYTLIAAPRFKAIPEIDGVNSEAFIILSFTKKLIIIGGTQYGGEIKKSIFTLMNYLMPKKGVLSMHCSANIGKDGDTALFFGLSGTGKTTLSADPERFLIGDDEHGWSERGIFNFEGGCYAKCINLSREKEPQIWDSIRFGAI 288          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_BREBN (Phosphoenolpyruvate carboxykinase [ATP] OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=pckA PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.409e-47
Identity = 98/220 (44.55%), Postives = 131/220 (59.55%), Query Frame = 2
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G  N  +    F   ++  + YL S D++FV D F   D   R+ +R+V+  A+H+LF   + IRP+ EEL    + +FT+  A  F  N   H   S T I L+  ++ ++I GT+YAGEMKK +FSVM+ L+P+R +L +H   N+GKDGDVA               D +R+LIGDDEH W DNGV NIEGGCYAKC+ LS E EP IW A QFG V
Sbjct:   75 GPVNQPISTEKFQALQQDVLQYLQSKDELFVFDGFAGADTTYRLPIRVVNEFAWHNLFARQLFIRPSEEELAAHES-EFTVIYAPNFKANPAVHGTNSETFIVLSFEQKTVLIGGTEYAGEMKKSIFSVMNMLLPERNVLPMHCSANVGKDGDVALFFGLSGTGKTTLSADPDRFLIGDDEHGWSDNGVFNIEGGCYAKCVKLSEEGEPQIWKAIQFGTV 293          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_STAES (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pckA PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.479e-46
Identity = 94/221 (42.53%), Postives = 137/221 (61.99%), Query Frame = 2
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTP-EELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G  N  MDE TFL    + +DYLN  +++++   +   D ++R+K+++++  A+H+LF  NM IRP   +E +N   P+FTI +A  F  N       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D  R LIGDDEH W  NGV NIEGGCYAK I LS++KEP I+NA ++G +
Sbjct:   78 GDINQPMDEETFLKLYNKVLDYLNQKEELYIFSGYAGSDKESRLKLKVINELAWHNLFARNMFIRPESIDEAQNI-KPNFTIVSAPHFKANPKLDGTHSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPKRKLIGDDEHGWNKNGVFNIEGGCYAKAIHLSKQKEPQIYNAIKYGTI 297          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_STAEQ (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pckA PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 5.934e-46
Identity = 94/221 (42.53%), Postives = 137/221 (61.99%), Query Frame = 2
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTP-EELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G  N  MDE TFL    + +DYLN  +++++   +   D ++R+K+++++  A+H+LF  NM IRP   +E +N   P+FTI +A  F  N       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D  R LIGDDEH W  NGV NIEGGCYAK I LS++KEP I+NA ++G +
Sbjct:   78 GDINQPMDEETFLKLYNKVLDYLNQKEELYIFSGYAGSDKESRLKLKVINELAWHNLFARNMFIRPESIDEAQNI-KPNFTIVSAPHFKANPKLDGTHSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPIQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPKRKLIGDDEHGWNKNGVFNIEGGCYAKAIHLSKQKEPQIYNAIKYGTI 297          
The following BLAST results are available for this feature:
BLAST of FC929899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_KLULA5.330e-7156.39Phosphoenolpyruvate carboxykinase [ATP] OS=Kluyver... [more]
PCKA_YEAST4.512e-7055.70Phosphoenolpyruvate carboxykinase [ATP] OS=Sacchar... [more]
PCKA_EMENI1.313e-6956.33Phosphoenolpyruvate carboxykinase [ATP] OS=Emerice... [more]
PCKA_ASHGO4.988e-6954.42Phosphoenolpyruvate carboxykinase [ATP] OS=Ashbya ... [more]
PCKA_TRYCR2.487e-5247.53Phosphoenolpyruvate carboxykinase [ATP], glycosoma... [more]
PCKA_TRYBB3.248e-5248.64Phosphoenolpyruvate carboxykinase [ATP], glycosoma... [more]
PCKA_THETN9.781e-4942.92Phosphoenolpyruvate carboxykinase [ATP] OS=Thermoa... [more]
PCKA_BREBN2.409e-4744.55Phosphoenolpyruvate carboxykinase [ATP] OS=Breviba... [more]
PCKA_STAES3.479e-4642.53Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAEQ5.934e-4642.53Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]

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Properties
Property NameValue
Genbank descriptionC34001F06EF PostHarvC1 Citrus clementina cDNA clone C34001F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929899 ID=FC929899; Name=FC929899; organism=Citrus clementina; type=EST; length=686bp
GGAGCATGAACTTTGGTGGGGAAAGGGTTCACCTAACATTGAAATGGACG
AGCACACATTTTTGGTGAACAGAGAAAGGGCTGTTGATTACTTGAATTCT
TTGGACAAAGTTTTTGTGAATGATCAATTCTTGAACTGGGATCCACAGAA
CCGAGTCAAAGTCAGAATTGTTTCTGCAAGGGCTTACCATTCTTTGTTCA
TGCACAACATGTGTATCCGACCCACTCCTGAAGAGCTGGAGAATTTCGGT
ACTCCGGACTTCACTATATACAATGCTGGACAGTTCCCGTGTAATCGTTA
TACTCACTACATGACATCCTCCACTAGCATAGACCTTAATCTTGCTAGGA
GGGAAATGGTCATCCTCGGCACACAGTACGCCGGGGAAATGAAGAAGGGT
CTTTTCAGTGTTATGCATTATCTCATGCCTAAACGTCAAATCCTCTCCCT
TCATTCTGGCTGCAATATGGGAAAAGATGGAGATGTTGCCCTCTTCTTTG
GATTGTCAGGTACTGGAAAGACAACACTGTCTACTGATCACAATCGATAT
CTGATTGGAGACGATGAACACTGTTGGGGTGACAATGGTGTGTCAAACAT
TGAGGGTGGTTGCTATGCCAAGTGCATTGATCTCTCAAGGGAGAAGGAGC
CTGATATCTGGAATGCCATNCAGTTTGGCGCTGTGT
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