FC929899

Overview
NameFC929899
Unique NameFC929899
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_GEOKA (Phosphoenolpyruvate carboxykinase [ATP] OS=Geobacillus kaustophilus GN=pckA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 7.750e-46
Identity = 97/220 (44.09%), Postives = 135/220 (61.36%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G+ N  M   TF    ++ +DYL   D++FV   F   DP+ R+ +++V+  A+H+LF+H + IRP+  EL     P FT+  A  F  +       S   I ++  RR ++I GT+YAGEMKK +FSVM+YL+P++ IL +H   N+G++GDVA               D NR LIGDDEH W + G+ NIEGGCYAKCI+LSREKEP I++A  FGAV
Sbjct:   76 GAVNQPMSPETFDKLYDKVLDYLMKKDELFVFKGFAGADPKYRLPIQVVNEFAWHNLFVHQLFIRPSAAELAAH-EPQFTVICAPNFKADPKVDGTRSEAFIIISFERRTVLIGGTEYAGEMKKSIFSVMNYLLPEQGILPMHCSANVGQEGDVALFFGLSGTGKTTLSTDPNRRLIGDDEHGWSNRGIFNIEGGCYAKCINLSREKEPQIFDAIGFGAV 294
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_BACCN (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=pckA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 7.750e-46
Identity = 95/220 (43.18%), Postives = 136/220 (61.82%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G  N  + E  F     + ++YL   +++FV   F   D   R+ +++V+  A+H+LF+H + IRPT EEL N   P FTI +A  F  +       S   I ++  +R ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D +R LIGDDEH W DNGV NIEGGCYAKCI+LS EKEP I++A +FG+V
Sbjct:   76 GPVNQPISEERFNKLYTKVLEYLKEKEELFVFKGFAGADRNYRLPIQVVNEYAWHNLFVHQLFIRPTEEELANHNAP-FTIVSAPNFKADPAVDGTNSEAFIIVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWSDNGVFNIEGGCYAKCINLSHEKEPQIFDAIKFGSV 294
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_GEOTN (Phosphoenolpyruvate carboxykinase [ATP] OS=Geobacillus thermodenitrificans (strain NG80-2) GN=pckA PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.322e-45
Identity = 96/220 (43.64%), Postives = 135/220 (61.36%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G+ N  M   TF    ++ +DYL   D++FV   F   DP+ R+ +++V+  A+H+LF+H + IRP+ EEL +   P FT+  A  F  +       S   I ++  +R ++I GT+YAGEMKK +FSVM+YL+P++ IL +H   N+G++GDVA               D  R LIGDDEH W   G+ NIEGGCYAKCI+LSREKEP I++A  FGAV
Sbjct:   76 GTVNQPMAPETFQKLYDKVLDYLMKKDELFVFKGFAGADPKARLPIQVVNEFAWHNLFVHQLFIRPSAEELADH-EPQFTVICAPNFKADPAVDGTRSEAFIIISFEQRTVLIGGTEYAGEMKKSIFSVMNYLLPEQGILPMHCSANVGQEGDVALFFGLSGTGKTTLSTDPKRRLIGDDEHGWSSRGIFNIEGGCYAKCINLSREKEPQIFDAIGFGAV 294
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_STACT (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus carnosus (strain TM300) GN=pckA PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.255e-45
Identity = 90/220 (40.91%), Postives = 138/220 (62.73%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            GS N  ++E  FL   ++ +DYL+  D+++V + +   D   ++++ +V+  A+H+LF HNM IRP+ ++      P+FTI +A  F  N       S T + ++   R ++I GT+YAGEMKKG+FSVM+YL+P++ I+S+H   N+G+ GDVA                 +R LIGDDEH W  NG+ NIEGGCYAK I+LS+EKEP I++A ++G +
Sbjct:   78 GSVNQPIEEEKFLRLSDKVLDYLDQKDELYVFNGYAGSDQDTQLRLTVVNEMAWHNLFAHNMFIRPSSKDEAEKIKPNFTIVSAPHFKANPEEDGTASETFVIISFKHRIILIGGTEYAGEMKKGIFSVMNYLLPQQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSAAPDRKLIGDDEHGWNKNGIFNIEGGCYAKAINLSKEKEPQIYDAIRYGTI 297
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_BACHD (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus halodurans GN=pckA PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.255e-45
Identity = 95/220 (43.18%), Postives = 134/220 (60.91%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G  N  +++ TFL   E+ + YL   D++F    F   D   R+ +++V+  A+H+LF   + I+PT EEL    TP+FTI +A  F  +       S   + ++   R ++I GT+YAGEMKK +FSVM+YL+P++ +LS+H   N+G +GDVA               D NR LIGDDEH W + GV NIEGGCYAKC++LS EKEP IWNA +FG+V
Sbjct:   76 GQVNQAIEKETFLHLYEKVLTYLADKDELFEFRGFAGADKTYRLPLQVVNEFAWHNLFAQQLFIQPTTEELTQH-TPEFTIVSAPGFKADPSVDGTRSEAFVIISFEERIVLIGGTEYAGEMKKSIFSVMNYLLPEQDVLSMHCSANVGVEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSERGVFNIEGGCYAKCVNLSYEKEPQIWNAIRFGSV 294
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_STAHJ (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus haemolyticus (strain JCSC1435) GN=pckA PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.561e-45
Identity = 91/220 (41.36%), Postives = 134/220 (60.91%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G  N  +DE TFL    + +DYL+  D+++V + +   D   ++K+ +++  A+H+LF  NM IRP  +E  +   P+FTI +A  F  +       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G  GDVA                 +R LIGDDEH W  NG+ NIEGGCYAK I+LS+EKEP I+NA Q+G +
Sbjct:   78 GDINQPIDEETFLNLYSKVLDYLDKKDELYVFNGYAGSDKDTQLKLTVINELAWHNLFAQNMFIRPDSKEEASNIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKTILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGDKGDVALFFGLSGTGKTTLSAAPDRKLIGDDEHGWNKNGIFNIEGGCYAKAINLSKEKEPQIYNAIQYGTI 297
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_STAAW (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain MW2) GN=pckA PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.568e-45
Identity = 92/220 (41.82%), Postives = 134/220 (60.91%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G  N  +DE TFL    + +DYL+  D+++V   +   D    +K+ +++  A+H+LF  NM IRP  +E      P+FTI +A  F  +       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W  NGV NIEGGCYAK I+LS+EKEP I++A ++GA+
Sbjct:   78 GEINQPIDEETFLKLYHKVLDYLDKKDELYVFKGYAGSDKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAI 297
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_STAAU (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus GN=pckA PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.568e-45
Identity = 92/220 (41.82%), Postives = 134/220 (60.91%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G  N  +DE TFL    + +DYL+  D+++V   +   D    +K+ +++  A+H+LF  NM IRP  +E      P+FTI +A  F  +       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W  NGV NIEGGCYAK I+LS+EKEP I++A ++GA+
Sbjct:   78 GEINQPIDEETFLKLYHKVLDYLDKKDELYVFKGYAGSDKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAI 297
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_STAAT (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=pckA PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.568e-45
Identity = 92/220 (41.82%), Postives = 134/220 (60.91%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G  N  +DE TFL    + +DYL+  D+++V   +   D    +K+ +++  A+H+LF  NM IRP  +E      P+FTI +A  F  +       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W  NGV NIEGGCYAK I+LS+EKEP I++A ++GA+
Sbjct:   78 GEINQPIDEETFLKLYHKVLDYLDKKDELYVFKGYAGSDKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAI 297
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_STAAS (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain MSSA476) GN=pckA PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.568e-45
Identity = 92/220 (41.82%), Postives = 134/220 (60.91%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G  N  +DE TFL    + +DYL+  D+++V   +   D    +K+ +++  A+H+LF  NM IRP  +E      P+FTI +A  F  +       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W  NGV NIEGGCYAK I+LS+EKEP I++A ++GA+
Sbjct:   78 GEINQPIDEETFLKLYHKVLDYLDKKDELYVFKGYAGSDKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAI 297
The following BLAST results are available for this feature:
BLAST of FC929899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_GEOKA7.750e-4644.09Phosphoenolpyruvate carboxykinase [ATP] OS=Geobaci... [more]
PCKA_BACCN7.750e-4643.18Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_GEOTN1.322e-4543.64Phosphoenolpyruvate carboxykinase [ATP] OS=Geobaci... [more]
PCKA_STACT2.255e-4540.91Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_BACHD2.255e-4543.18Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_STAHJ6.561e-4541.36Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAAW8.568e-4541.82Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAAU8.568e-4541.82Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAAT8.568e-4541.82Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAAS8.568e-4541.82Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]

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Properties
Property NameValue
Genbank descriptionC34001F06EF PostHarvC1 Citrus clementina cDNA clone C34001F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929899 ID=FC929899; Name=FC929899; organism=Citrus clementina; type=EST; length=686bp
GGAGCATGAACTTTGGTGGGGAAAGGGTTCACCTAACATTGAAATGGACG
AGCACACATTTTTGGTGAACAGAGAAAGGGCTGTTGATTACTTGAATTCT
TTGGACAAAGTTTTTGTGAATGATCAATTCTTGAACTGGGATCCACAGAA
CCGAGTCAAAGTCAGAATTGTTTCTGCAAGGGCTTACCATTCTTTGTTCA
TGCACAACATGTGTATCCGACCCACTCCTGAAGAGCTGGAGAATTTCGGT
ACTCCGGACTTCACTATATACAATGCTGGACAGTTCCCGTGTAATCGTTA
TACTCACTACATGACATCCTCCACTAGCATAGACCTTAATCTTGCTAGGA
GGGAAATGGTCATCCTCGGCACACAGTACGCCGGGGAAATGAAGAAGGGT
CTTTTCAGTGTTATGCATTATCTCATGCCTAAACGTCAAATCCTCTCCCT
TCATTCTGGCTGCAATATGGGAAAAGATGGAGATGTTGCCCTCTTCTTTG
GATTGTCAGGTACTGGAAAGACAACACTGTCTACTGATCACAATCGATAT
CTGATTGGAGACGATGAACACTGTTGGGGTGACAATGGTGTGTCAAACAT
TGAGGGTGGTTGCTATGCCAAGTGCATTGATCTCTCAAGGGAGAAGGAGC
CTGATATCTGGAATGCCATNCAGTTTGGCGCTGTGT
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