FC929899

Overview
NameFC929899
Unique NameFC929899
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_STAAR (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain MRSA252) GN=pckA PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.568e-45
Identity = 92/220 (41.82%), Postives = 134/220 (60.91%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G  N  +DE TFL    + +DYL+  D+++V   +   D    +K+ +++  A+H+LF  NM IRP  +E      P+FTI +A  F  +       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W  NGV NIEGGCYAK I+LS+EKEP I++A ++GA+
Sbjct:   78 GEINQPIDEETFLKLYHKVLDYLDKKDELYVFKGYAGSDKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAI 297
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_STAAN (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain N315) GN=pckA PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.568e-45
Identity = 92/220 (41.82%), Postives = 134/220 (60.91%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G  N  +DE TFL    + +DYL+  D+++V   +   D    +K+ +++  A+H+LF  NM IRP  +E      P+FTI +A  F  +       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W  NGV NIEGGCYAK I+LS+EKEP I++A ++GA+
Sbjct:   78 GEINQPIDEETFLKLYHKVLDYLDKKDELYVFKGYAGSDKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAI 297
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_STAAM (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pckA PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.568e-45
Identity = 92/220 (41.82%), Postives = 134/220 (60.91%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G  N  +DE TFL    + +DYL+  D+++V   +   D    +K+ +++  A+H+LF  NM IRP  +E      P+FTI +A  F  +       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W  NGV NIEGGCYAK I+LS+EKEP I++A ++GA+
Sbjct:   78 GEINQPIDEETFLKLYHKVLDYLDKKDELYVFKGYAGSDKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAI 297
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_STAAE (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain Newman) GN=pckA PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.568e-45
Identity = 92/220 (41.82%), Postives = 134/220 (60.91%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G  N  +DE TFL    + +DYL+  D+++V   +   D    +K+ +++  A+H+LF  NM IRP  +E      P+FTI +A  F  +       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W  NGV NIEGGCYAK I+LS+EKEP I++A ++GA+
Sbjct:   78 GEINQPIDEETFLKLYHKVLDYLDKKDELYVFKGYAGSDKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAI 297
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_STAAC (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain COL) GN=pckA PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.568e-45
Identity = 92/220 (41.82%), Postives = 134/220 (60.91%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G  N  +DE TFL    + +DYL+  D+++V   +   D    +K+ +++  A+H+LF  NM IRP  +E      P+FTI +A  F  +       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W  NGV NIEGGCYAK I+LS+EKEP I++A ++GA+
Sbjct:   78 GEINQPIDEETFLKLYHKVLDYLDKKDELYVFKGYAGSDKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAI 297
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_STAA9 (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain JH9) GN=pckA PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.568e-45
Identity = 92/220 (41.82%), Postives = 134/220 (60.91%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G  N  +DE TFL    + +DYL+  D+++V   +   D    +K+ +++  A+H+LF  NM IRP  +E      P+FTI +A  F  +       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W  NGV NIEGGCYAK I+LS+EKEP I++A ++GA+
Sbjct:   78 GEINQPIDEETFLKLYHKVLDYLDKKDELYVFKGYAGSDKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAI 297
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_STAA8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain NCTC 8325) GN=pckA PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.568e-45
Identity = 92/220 (41.82%), Postives = 134/220 (60.91%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G  N  +DE TFL    + +DYL+  D+++V   +   D    +K+ +++  A+H+LF  NM IRP  +E      P+FTI +A  F  +       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W  NGV NIEGGCYAK I+LS+EKEP I++A ++GA+
Sbjct:   78 GEINQPIDEETFLKLYHKVLDYLDKKDELYVFKGYAGSDKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAI 297
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_STAA3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain USA300) GN=pckA PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.568e-45
Identity = 92/220 (41.82%), Postives = 134/220 (60.91%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G  N  +DE TFL    + +DYL+  D+++V   +   D    +K+ +++  A+H+LF  NM IRP  +E      P+FTI +A  F  +       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W  NGV NIEGGCYAK I+LS+EKEP I++A ++GA+
Sbjct:   78 GEINQPIDEETFLKLYHKVLDYLDKKDELYVFKGYAGSDKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAI 297
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_STAA2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain JH1) GN=pckA PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.568e-45
Identity = 92/220 (41.82%), Postives = 134/220 (60.91%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G  N  +DE TFL    + +DYL+  D+++V   +   D    +K+ +++  A+H+LF  NM IRP  +E      P+FTI +A  F  +       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W  NGV NIEGGCYAK I+LS+EKEP I++A ++GA+
Sbjct:   78 GEINQPIDEETFLKLYHKVLDYLDKKDELYVFKGYAGSDKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAI 297
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_STAA1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=pckA PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.568e-45
Identity = 92/220 (41.82%), Postives = 134/220 (60.91%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G  N  +DE TFL    + +DYL+  D+++V   +   D    +K+ +++  A+H+LF  NM IRP  +E      P+FTI +A  F  +       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W  NGV NIEGGCYAK I+LS+EKEP I++A ++GA+
Sbjct:   78 GEINQPIDEETFLKLYHKVLDYLDKKDELYVFKGYAGSDKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAI 297
The following BLAST results are available for this feature:
BLAST of FC929899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_STAAR8.568e-4541.82Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAAN8.568e-4541.82Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAAM8.568e-4541.82Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAAE8.568e-4541.82Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAAC8.568e-4541.82Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAA98.568e-4541.82Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAA88.568e-4541.82Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAA38.568e-4541.82Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAA28.568e-4541.82Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAA18.568e-4541.82Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]

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Properties
Property NameValue
Genbank descriptionC34001F06EF PostHarvC1 Citrus clementina cDNA clone C34001F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929899 ID=FC929899; Name=FC929899; organism=Citrus clementina; type=EST; length=686bp
GGAGCATGAACTTTGGTGGGGAAAGGGTTCACCTAACATTGAAATGGACG
AGCACACATTTTTGGTGAACAGAGAAAGGGCTGTTGATTACTTGAATTCT
TTGGACAAAGTTTTTGTGAATGATCAATTCTTGAACTGGGATCCACAGAA
CCGAGTCAAAGTCAGAATTGTTTCTGCAAGGGCTTACCATTCTTTGTTCA
TGCACAACATGTGTATCCGACCCACTCCTGAAGAGCTGGAGAATTTCGGT
ACTCCGGACTTCACTATATACAATGCTGGACAGTTCCCGTGTAATCGTTA
TACTCACTACATGACATCCTCCACTAGCATAGACCTTAATCTTGCTAGGA
GGGAAATGGTCATCCTCGGCACACAGTACGCCGGGGAAATGAAGAAGGGT
CTTTTCAGTGTTATGCATTATCTCATGCCTAAACGTCAAATCCTCTCCCT
TCATTCTGGCTGCAATATGGGAAAAGATGGAGATGTTGCCCTCTTCTTTG
GATTGTCAGGTACTGGAAAGACAACACTGTCTACTGATCACAATCGATAT
CTGATTGGAGACGATGAACACTGTTGGGGTGACAATGGTGTGTCAAACAT
TGAGGGTGGTTGCTATGCCAAGTGCATTGATCTCTCAAGGGAGAAGGAGC
CTGATATCTGGAATGCCATNCAGTTTGGCGCTGTGT
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