FC929899

Overview
NameFC929899
Unique NameFC929899
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14670 contig Ccv1_Contig14670:723..1408. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_BACHK (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus thuringiensis subsp. konkukian GN=pckA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.119e-44
Identity = 92/220 (41.82%), Postives = 136/220 (61.82%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G+ N  + E  F     + ++YL   +++FV   F   D   R+ +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  +R ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH W DNGV NIEGGCYAKC++LS EKEP I++A  FG+V
Sbjct:   76 GAVNQPISEEHFNKLYTKVLEYLKEKEELFVFKGFAGADRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSV 294
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_BACCZ (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain ZK / E33L) GN=pckA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.119e-44
Identity = 92/220 (41.82%), Postives = 136/220 (61.82%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G+ N  + E  F     + ++YL   +++FV   F   D   R+ +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  +R ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH W DNGV NIEGGCYAKC++LS EKEP I++A  FG+V
Sbjct:   76 GAVNQPISEEHFNKLYTKVLEYLKEKEELFVFKGFAGADRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSV 294
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_BACCR (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=pckA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.119e-44
Identity = 92/220 (41.82%), Postives = 136/220 (61.82%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G+ N  + E  F     + ++YL   +++FV   F   D   R+ +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  +R ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH W DNGV NIEGGCYAKC++LS EKEP I++A  FG+V
Sbjct:   76 GAVNQPISEEHFNKLYTKVLEYLKEKEELFVFKGFAGADRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSV 294
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_BACCQ (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain Q1) GN=pckA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.119e-44
Identity = 92/220 (41.82%), Postives = 136/220 (61.82%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G+ N  + E  F     + ++YL   +++FV   F   D   R+ +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  +R ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH W DNGV NIEGGCYAKC++LS EKEP I++A  FG+V
Sbjct:   76 GAVNQPISEEHFNKLYTKVLEYLKEKEELFVFKGFAGADRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSV 294
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_BACC7 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain AH187) GN=pckA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.119e-44
Identity = 92/220 (41.82%), Postives = 136/220 (61.82%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G+ N  + E  F     + ++YL   +++FV   F   D   R+ +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  +R ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH W DNGV NIEGGCYAKC++LS EKEP I++A  FG+V
Sbjct:   76 GAVNQPISEEHFNKLYTKVLEYLKEKEELFVFKGFAGADRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSV 294
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_BACC3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain 03BB102) GN=pckA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.119e-44
Identity = 92/220 (41.82%), Postives = 136/220 (61.82%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G+ N  + E  F     + ++YL   +++FV   F   D   R+ +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  +R ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH W DNGV NIEGGCYAKC++LS EKEP I++A  FG+V
Sbjct:   76 GAVNQPISEEHFNKLYTKVLEYLKEKEELFVFKGFAGADRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSV 294
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_BACC1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain ATCC 10987) GN=pckA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.119e-44
Identity = 92/220 (41.82%), Postives = 136/220 (61.82%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G+ N  + E  F     + ++YL   +++FV   F   D   R+ +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  +R ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH W DNGV NIEGGCYAKC++LS EKEP I++A  FG+V
Sbjct:   76 GAVNQPISEEHFNKLYTKVLEYLKEKEELFVFKGFAGADRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSV 294
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_BACC0 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain AH820) GN=pckA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.119e-44
Identity = 92/220 (41.82%), Postives = 136/220 (61.82%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G+ N  + E  F     + ++YL   +++FV   F   D   R+ +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  +R ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH W DNGV NIEGGCYAKC++LS EKEP I++A  FG+V
Sbjct:   76 GAVNQPISEEHFNKLYTKVLEYLKEKEELFVFKGFAGADRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSV 294
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_BACAN (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus anthracis GN=pckA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.119e-44
Identity = 92/220 (41.82%), Postives = 136/220 (61.82%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G+ N  + E  F     + ++YL   +++FV   F   D   R+ +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  +R ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH W DNGV NIEGGCYAKC++LS EKEP I++A  FG+V
Sbjct:   76 GAVNQPISEEHFNKLYTKVLEYLKEKEELFVFKGFAGADRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSV 294
[Close]
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_BACAH (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus thuringiensis (strain Al Hakam) GN=pckA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.119e-44
Identity = 92/220 (41.82%), Postives = 136/220 (61.82%), Query Frame = 2 
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G+ N  + E  F     + ++YL   +++FV   F   D   R+ +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  +R ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH W DNGV NIEGGCYAKC++LS EKEP I++A  FG+V
Sbjct:   76 GAVNQPISEEHFNKLYTKVLEYLKEKEELFVFKGFAGADRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSV 294
The following BLAST results are available for this feature:
BLAST of FC929899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_BACHK1.119e-4441.82Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACCZ1.119e-4441.82Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACCR1.119e-4441.82Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACCQ1.119e-4441.82Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACC71.119e-4441.82Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACC31.119e-4441.82Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACC11.119e-4441.82Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACC01.119e-4441.82Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACAN1.119e-4441.82Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACAH1.119e-4441.82Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34001F06EF PostHarvC1 Citrus clementina cDNA clone C34001F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929899 ID=FC929899; Name=FC929899; organism=Citrus clementina; type=EST; length=686bp
GGAGCATGAACTTTGGTGGGGAAAGGGTTCACCTAACATTGAAATGGACG
AGCACACATTTTTGGTGAACAGAGAAAGGGCTGTTGATTACTTGAATTCT
TTGGACAAAGTTTTTGTGAATGATCAATTCTTGAACTGGGATCCACAGAA
CCGAGTCAAAGTCAGAATTGTTTCTGCAAGGGCTTACCATTCTTTGTTCA
TGCACAACATGTGTATCCGACCCACTCCTGAAGAGCTGGAGAATTTCGGT
ACTCCGGACTTCACTATATACAATGCTGGACAGTTCCCGTGTAATCGTTA
TACTCACTACATGACATCCTCCACTAGCATAGACCTTAATCTTGCTAGGA
GGGAAATGGTCATCCTCGGCACACAGTACGCCGGGGAAATGAAGAAGGGT
CTTTTCAGTGTTATGCATTATCTCATGCCTAAACGTCAAATCCTCTCCCT
TCATTCTGGCTGCAATATGGGAAAAGATGGAGATGTTGCCCTCTTCTTTG
GATTGTCAGGTACTGGAAAGACAACACTGTCTACTGATCACAATCGATAT
CTGATTGGAGACGATGAACACTGTTGGGGTGACAATGGTGTGTCAAACAT
TGAGGGTGGTTGCTATGCCAAGTGCATTGATCTCTCAAGGGAGAAGGAGC
CTGATATCTGGAATGCCATNCAGTTTGGCGCTGTGT
back to top