FC929899

Overview
NameFC929899
Unique NameFC929899
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_BACAA (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus anthracis (strain A0248) GN=pckA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.119e-44
Identity = 92/220 (41.82%), Postives = 136/220 (61.82%), Query Frame = 2
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G+ N  + E  F     + ++YL   +++FV   F   D   R+ +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  +R ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH W DNGV NIEGGCYAKC++LS EKEP I++A  FG+V
Sbjct:   76 GAVNQPISEEHFNKLYTKVLEYLKEKEELFVFKGFAGADRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSV 294          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_BACC2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain G9842) GN=pckA PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.462e-44
Identity = 92/220 (41.82%), Postives = 136/220 (61.82%), Query Frame = 2
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G+ N  + E  F     + ++YL   +++FV   F   D   R+ +++++  A+H+LF+H + IRPT EEL    +  FTI +A  F  +       S   I ++  +R ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH W DNGV NIEGGCYAKC++LS EKEP I++A +FG+V
Sbjct:   76 GAVNQPISEEHFNKLYTKVLEYLKEKEELFVFKGFAGADRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-GFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAIKFGSV 294          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_LYSSC (Phosphoenolpyruvate carboxykinase [ATP] OS=Lysinibacillus sphaericus (strain C3-41) GN=pckA PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.909e-44
Identity = 94/223 (42.15%), Postives = 137/223 (61.43%), Query Frame = 2
Query:   17 WGKGSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            WGK +  I  +    L    + + YL   D++FV   F   D  +++ +++++  A+H+LF H + IRPT EEL +    DFT+ +A  F  +       S T I ++L ++ ++I GT+YAGEMKK +F +M+YL+P++ ILS+H   N+G+ GDVA               D +R LIGDDEH W DNGV NIEGGCYAK I+LS EKEP+I+NA +FG+V
Sbjct:   75 WGKVNQPISSEVFDNLY--VKVIKYLKERDELFVFKGFAGADKDSQLSIQVINEYAWHNLFAHQLFIRPTKEELASH-VADFTVISAPNFKADPAVDGTASETFIIVSLEKKIILIGGTEYAGEMKKSIFGIMNYLLPQQGILSMHCSANVGEAGDVALFFGLSGTGKTTLSADPDRKLIGDDEHGWSDNGVFNIEGGCYAKTINLSAEKEPEIYNAIRFGSV 294          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_STAAB (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=pckA PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.493e-44
Identity = 91/220 (41.36%), Postives = 133/220 (60.45%), Query Frame = 2
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G  N  +DE TFL    + +DYL+  D+++V   +   D    +K+ +++  A+H+LF  NM IRP  +E      P+FTI +   F  +       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W  NGV NIEGGCYAK I+LS+EKEP I++A ++GA+
Sbjct:   78 GEINQPIDEETFLKLYHKVLDYLDKKDELYVFKGYAGSDKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSVPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAI 297          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_DEIGD (Phosphoenolpyruvate carboxykinase [ATP] OS=Deinococcus geothermalis (strain DSM 11300) GN=pckA PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.493e-44
Identity = 97/226 (42.92%), Postives = 132/226 (58.41%), Query Frame = 2
Query:   11 LWWGKGSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQ-FGAV 685
            +WWG    N  +    F    ++   Y    + +FV D F   DPQ R+ VR+++  AYHSLF+ NM +RPT EELE+F  PD+T+ N   F  +     + S T I +N  R+ +++ GTQYAGE KKG+F V++YL+P+R ++ +H   NMG+DGDVA               D +R LIGDDEH W D GV N EGGCYAK I L+ E EP I+   Q +G V
Sbjct:   72 VWWG--GFNTPISPVVFDRLLDKMTHYAEGRE-LFVQDVFAGTDPQYRIAVRVITEMAYHSLFVRNMFVRPTAEELEHF-QPDWTVLNIPSFKADPERDGVRSETFILVNFTRKMILVGGTQYAGENKKGIFGVLNYLLPQRGVMPMHCSANMGEDGDVALFFGLSGTGKTTLSADPSRRLIGDDEHGWTDTGVFNFEGGCYAKVIHLNPEAEPAIYRTTQTYGTV 293          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_BACC4 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain B4264) GN=pckA PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.493e-44
Identity = 92/220 (41.82%), Postives = 135/220 (61.36%), Query Frame = 2
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G+ N  + E  F     + ++YL   +++FV   F   D   R+ +++++  A+H+LF+H + IRPT EEL    +  FTI +A  F  +       S   I ++  +R ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH W DNGV NIEGGCYAKC++LS EKEP I++A  FG+V
Sbjct:   76 GAVNQPISEEHFNKLYTKVLEYLKEKEELFVFKGFAGADRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-GFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSV 294          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_BACWK (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus weihenstephanensis (strain KBAB4) GN=pckA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.254e-44
Identity = 91/220 (41.36%), Postives = 136/220 (61.82%), Query Frame = 2
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G+ N  + E  F     + ++YL   +++F+   F   D   R+ +++V+  A+H+LF+H + IRP  EEL    + +FTI +A  F  +       S   I ++  +R ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH W DNGV NIEGGCYAKC++LS EKEP I++A +FG+V
Sbjct:   76 GAVNQPISEEHFNKLYIKVLEYLKEKEELFIFKGFAGADRNYRLPIQVVNEYAWHNLFVHQLFIRPNEEELATHES-EFTIVSAPNFKADPAIDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSSNVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAIKFGSV 294          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA1_MOOTA (Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Moorella thermoacetica (strain ATCC 39073) GN=pckA1 PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.473e-44
Identity = 99/220 (45.00%), Postives = 124/220 (56.36%), Query Frame = 2
Query:   26 GSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            G+ N  + E TF     R   YL   D +FV D F+  DP  R+ +RIV+  A+ +LF+H + IRPT EEL     P FT+  A  F          S   I LN  RR ++I GT YAGEMKK +F+VM+YL+P++ +  +H   NMG  GD A               D  RYLIGDDEH W D G+ N EGGCYAKCI LS E EP IWNA +FG+V
Sbjct:   75 GAVNQPVSEATFERLYSRLTAYLQGKD-LFVFDGFVGADPAYRMPIRIVNEYAWQNLFVHQLFIRPTAEELAGH-EPRFTVICAPGFKAIPEEDGTRSEAFIILNFDRRLVIIGGTSYAGEMKKSIFTVMNYLLPEQGVCPMHCSANMGPAGDTALFFGLSGTGKTTLSADPERYLIGDDEHGWSDKGIFNFEGGCYAKCIKLSAEHEPQIWNAIRFGSV 292          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_AZOPC (Phosphoenolpyruvate carboxykinase [ATP] OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=pckA PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.110e-43
Identity = 90/229 (39.30%), Postives = 133/229 (58.08%), Query Frame = 2
Query:    2 EHELWWGKGSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            E+ +WW  G+ N  +    +   ++  +  LN+  K+++ D F   +   R+KVR +   A+ + F+ NM IRP+  EL+++G PDF ++N  +    ++    + S   I  NL  +E +I GT Y GEMKKG+FS+ +Y +P + I S+H   N+G+ GDVA               D  RYLIGDDEH W DNG+ N EGGCYAK IDLS++ EPDIWNA +  A+
Sbjct:   73 ENTIWWD-GNINKPISRTIWDNLKDLTIKQLNTAKKLYIIDAFCGTNNDTRMKVRFIVEVAWQAHFVTNMFIRPSNYELDHYGDPDFVVFNGSKTTNPKWKEQGLNSEIYILFNLTEKEQIIGGTWYGGEMKKGMFSMQNYYLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSADPKRYLIGDDEHGWDDNGIFNYEGGCYAKVIDLSQKNEPDIWNAIRRDAL 300          
BLAST of FC929899 vs. ExPASy Swiss-Prot
Match: PCKA_BACA2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus amyloliquefaciens (strain FZB42) GN=pckA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.756e-43
Identity = 94/228 (41.23%), Postives = 137/228 (60.09%), Query Frame = 2
Query:    2 EHELWWGKGSPNIEMDEHTFLVNRERAVDYLNSLDKVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAXQFGAV 685
            E+++ WG  + N  + E  F     + V YL   D++FV + F   D + R+ + +V+  A+H+LF   + IRP  +E +    P FTI +A  F  +  T    S T I ++  +R ++I GT+YAGEMKK +FS+M++L+P++ IL +H   N+G+ GDVA               D +R LIGDDEH W D+GV NIEGGCYAKCI+LS EKEP I+ A +FG+V
Sbjct:   70 ENQIDWG--AVNQPISEEAFEKLYAKVVSYLKQRDELFVFEGFAGADEKYRLPITVVNEFAWHNLFARQLFIRPETDERDTQAQP-FTILSAPHFKADPETDGTHSETFIIVSFEKRVILIGGTEYAGEMKKSIFSIMNFLLPQQDILPMHCSANVGEKGDVALFFGLSGTGKTTLSADADRKLIGDDEHGWSDSGVFNIEGGCYAKCINLSEEKEPQIFRAIRFGSV 294          
The following BLAST results are available for this feature:
BLAST of FC929899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_BACAA1.119e-4441.82Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACC21.462e-4441.82Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_LYSSC1.909e-4442.15Phosphoenolpyruvate carboxykinase [ATP] OS=Lysinib... [more]
PCKA_STAAB2.493e-4441.36Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_DEIGD2.493e-4442.92Phosphoenolpyruvate carboxykinase [ATP] OS=Deinoco... [more]
PCKA_BACC42.493e-4441.82Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACWK7.254e-4441.36Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA1_MOOTA9.473e-4445.00Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Moore... [more]
PCKA_AZOPC2.110e-4339.30Phosphoenolpyruvate carboxykinase [ATP] OS=Azobact... [more]
PCKA_BACA22.756e-4341.23Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]

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Properties
Property NameValue
Genbank descriptionC34001F06EF PostHarvC1 Citrus clementina cDNA clone C34001F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929899 ID=FC929899; Name=FC929899; organism=Citrus clementina; type=EST; length=686bp
GGAGCATGAACTTTGGTGGGGAAAGGGTTCACCTAACATTGAAATGGACG
AGCACACATTTTTGGTGAACAGAGAAAGGGCTGTTGATTACTTGAATTCT
TTGGACAAAGTTTTTGTGAATGATCAATTCTTGAACTGGGATCCACAGAA
CCGAGTCAAAGTCAGAATTGTTTCTGCAAGGGCTTACCATTCTTTGTTCA
TGCACAACATGTGTATCCGACCCACTCCTGAAGAGCTGGAGAATTTCGGT
ACTCCGGACTTCACTATATACAATGCTGGACAGTTCCCGTGTAATCGTTA
TACTCACTACATGACATCCTCCACTAGCATAGACCTTAATCTTGCTAGGA
GGGAAATGGTCATCCTCGGCACACAGTACGCCGGGGAAATGAAGAAGGGT
CTTTTCAGTGTTATGCATTATCTCATGCCTAAACGTCAAATCCTCTCCCT
TCATTCTGGCTGCAATATGGGAAAAGATGGAGATGTTGCCCTCTTCTTTG
GATTGTCAGGTACTGGAAAGACAACACTGTCTACTGATCACAATCGATAT
CTGATTGGAGACGATGAACACTGTTGGGGTGACAATGGTGTGTCAAACAT
TGAGGGTGGTTGCTATGCCAAGTGCATTGATCTCTCAAGGGAGAAGGAGC
CTGATATCTGGAATGCCATNCAGTTTGGCGCTGTGT
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