FC929902
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPZ_PONAB (T-complex protein 1 subunit zeta OS=Pongo abelii GN=CCT6 PE=2 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 8.410e-24 Identity = 62/167 (37.13%), Postives = 94/167 (56.29%), Query Frame = 3 Query: 189 RGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLA 689 R A N+SA + + +LRT+LGPKG KML S GD+ +T DG +L +M + + A L+ +++ +QD GDGTT V++ G LL+QA+ + G+HP I EG+E A A++ LE + E D E L+ T+L +K+ L E V ++LA Sbjct: 15 RAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEEVKVSREM---DRETLIDVARTSLRTKVHAELADVLTEAVVDSILA 178
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPZ_HUMAN (T-complex protein 1 subunit zeta OS=Homo sapiens GN=CCT6A PE=1 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 8.410e-24 Identity = 62/167 (37.13%), Postives = 94/167 (56.29%), Query Frame = 3 Query: 189 RGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLA 689 R A N+SA + + +LRT+LGPKG KML S GD+ +T DG +L +M + + A L+ +++ +QD GDGTT V++ G LL+QA+ + G+HP I EG+E A A++ LE + E D E L+ T+L +K+ L E V ++LA Sbjct: 15 RAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEEVKVSREM---DRETLIDVARTSLRTKVHAELADVLTEAVVDSILA 178
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPH_YEAST (T-complex protein 1 subunit eta OS=Saccharomyces cerevisiae GN=CCT7 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.435e-23 Identity = 60/161 (37.27%), Postives = 99/161 (61.49%), Query Frame = 3 Query: 210 ANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTC-MTTLNSKMVNRCKRRLAEIAVKAVLA 689 +N++A AV L+ +LGP G D ++ + + TI+NDGATIL+ +DV + AK +V++SR+QD E+GDGTT V ++AG L+++A+ LE GI I +GY A +AVE + +A + L++ C T ++SK+++ ++ V AVL+ Sbjct: 28 SNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPAAKTLVDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLS 188
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPW_HUMAN (T-complex protein 1 subunit zeta-2 OS=Homo sapiens GN=CCT6B PE=1 SV=4) HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22 Identity = 62/167 (37.13%), Postives = 95/167 (56.89%), Query Frame = 3 Query: 189 RGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLA 689 R A N+ A + + +LRT+LGPKG KML S GD+ +T DG +L++M + + A L+ +++ +QD GDGTT V++ G LL+QA+ + G+HP IAEG+E A A+E LE + E + L+ T+L +K+ L E+ V +VLA Sbjct: 15 RAQAALAVNICAARGLQDVLRTNLGPKGTMKMLASGAGDIKLTKDGNVLLDEMQIQHPTASLIAKVATAQDDVTGDGTTSNVLIIGELLKQADLYISEGLHPRIIAEGFEAAKIKALEVLEEVKVTKEM---KRKILLDVARTSLQTKVHAELADVLTEVVVDSVLA 178
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPW_BOVIN (T-complex protein 1 subunit zeta-2 OS=Bos taurus GN=CCT6B PE=2 SV=3) HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22 Identity = 64/167 (38.32%), Postives = 96/167 (57.49%), Query Frame = 3 Query: 189 RGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLA 689 R A N+ A + + +LRT+LGPKG KML S GDV +T DG +L +M + + A L+ +++ +QD GDGTT V++ G LL+QA+ + G+HP IAEG+E+A A+E LE++ K E E + T+L +K+ + L E V +VLA Sbjct: 15 RAQAALAVNICAARGLQDVLRTNLGPKGTMKMLVSGAGDVKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIIAEGFEIAKIKALEVLEQVKIKKEM---KREIHLDVARTSLQTKVHPQLADVLTEAVVDSVLA 178
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPG_DICDI (T-complex protein 1 subunit gamma OS=Dictyostelium discoideum GN=cct3 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.705e-22 Identity = 56/163 (34.36%), Postives = 97/163 (59.51%), Query Frame = 3 Query: 198 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVL 686 +AQ+ A K+VA I++T LGPK M KM+ P G +TNDG IL ++DV + AK M+ELSR+QD +GDGTT VV++A +L +E +E+ IHP I + + MA ++ +++ + + L + +++ + + +K + + + +A+ AV+ Sbjct: 19 EAQQGIFLAVKSVASIIKTCLGPKAMLKMILDPMGTTVVTNDGNAILREIDVTHPAAKSMIELSRAQDENVGDGTTSVVILAAEVLASSELFIEKKIHPHYIIKAFRMALDDSLSIVDQYSVAID--LKNRPEVLKVVQSCIGTKFIGKWGSLMCNLALDAVM 179
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPB_ENCCU (T-complex protein 1 subunit beta OS=Encephalitozoon cuniculi GN=CCT2 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.028e-21 Identity = 69/165 (41.82%), Postives = 96/165 (58.18%), Query Frame = 3 Query: 189 RGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAV 683 RG DA++ ++ V IL+T+LGPKGM KML+ V +TNDGA IL + +D+ A++++ S QD+E GDGTT V ++A L+++A KL +HP +I GY MA E L I+ FE DL LV+ TTL SK++ R EI V AV Sbjct: 15 RGDDAKRTILAGTDIVGDILKTTLGPKGMLKMLKGQH--VNVTNDGAFILNNLMIDSPSARILIGSSTGQDWEEGDGTTSVAILASLLVKEAGKL---EMHPTKILRGYRMAQAKCEEILSSIS--FEATKEDLLKLVR---TTLCSKVLRYDLERFCEICVNAV 169
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPZ_SCHPO (T-complex protein 1 subunit zeta OS=Schizosaccharomyces pombe GN=cct6 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.754e-21 Identity = 55/162 (33.95%), Postives = 90/162 (55.56%), Query Frame = 3 Query: 201 AQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVL 686 A + N+SA + +L+++LGP G KML G + +T DG +L +M + N A + + + +QD GDGTT V ++ G LL+QAE + G+HP I++G+ +A A+ L+ FE D E L+ T+L++K+ ++ LA V A+L Sbjct: 17 ALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQIQNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFLDSFKTDFEV---DREVLLNVAKTSLSTKISSKVVESLAPAVVDAIL 175
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPW_MOUSE (T-complex protein 1 subunit zeta-2 OS=Mus musculus GN=Cct6b PE=2 SV=4) HSP 1 Score: 102.834 bits (255), Expect = 1.754e-21 Identity = 59/167 (35.33%), Postives = 94/167 (56.29%), Query Frame = 3 Query: 189 RGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLA 689 R A N+ A + + +LR +LGPKG KML S GD+ +T DG +L +M + + A ++ +++ +QD+ GDGTT V++ G LL+QA+ + G+HP I EG+++A A+E L+ I + E E L+ T+L +K+ L E V +VLA Sbjct: 15 RSQAALAVNICAARGLQDVLRPTLGPKGALKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASIIAKVAAAQDHVTGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFDVAKTKALEVLDEIKVQKEM---KREILLDVARTSLQTKVHAELADILTEAVVDSVLA 178
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPG_ENCCU (T-complex protein 1 subunit gamma OS=Encephalitozoon cuniculi GN=CCT3 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21 Identity = 52/160 (32.50%), Postives = 96/160 (60.00%), Query Frame = 3 Query: 204 QKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAV 683 Q + A K ++ ++RT LGP+ M KM+ + + +TNDG IL ++DV + A+ ++EL+++QD E+GDGTT VV++A +L + +L+R +HPIRI + A I ++ ++ A + ++ E ++ ++ SK+ N K + +A++AV Sbjct: 21 QNESAIAAKTISSVIRTCLGPRAMQKMVLTKINSIELTNDGNAILRELDVAHPSARSLIELAKTQDDEVGDGTTSVVLLAAEILNEMTYILDRDVHPIRICKALGRALEICIKAIDGAAISLD---SNEETKIKIINGSVASKICNILKVPIGNLALEAV 177 The following BLAST results are available for this feature:
BLAST of FC929902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 411
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929902 ID=FC929902; Name=FC929902; organism=Citrus clementina; type=EST; length=689bpback to top |