FC929902
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: THSB_THEAC (Thermosome subunit beta OS=Thermoplasma acidophilum GN=thsB PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.280e-37 Identity = 83/181 (45.86%), Postives = 122/181 (67.40%), Query Frame = 3 Query: 141 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAV 683 G+P +L+ E R G DA K N+ A A++ +R+SLGP+GMDKML GD+ ITNDG TIL++MDV++ AK+MVE+S++QD +GDGTT V++AG LL+QA+ L+ + +HP I+EGY MAS A ++ I+ K G ++ L++ T+LNSK + K +LAEI+ +AV Sbjct: 4 GQPIFILK--EGTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTK--IGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAV 180
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPD_KLULA (T-complex protein 1 subunit delta OS=Kluyveromyces lactis GN=CCT4 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.280e-37 Identity = 84/171 (49.12%), Postives = 122/171 (71.35%), Query Frame = 3 Query: 177 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLA 689 K+R + + +KAN+ A +AVA +RTSLGPKGMDKM+++ GD+ I+NDG TIL+QM + + +AK++VE+S +QD E GDGTT VV+M G+LL AEKLL +GIHP IAE ++ A+ +VE L ++ K L+D E LV+ T+L+SK+V++ LA +AV VL+ Sbjct: 14 KNREKPQEVRKANIIAARAVADAIRTSLGPKGMDKMIKTSRGDIIISNDGHTILKQMAILHPVAKMLVEVSGAQDVEAGDGTTSVVIMTGALLGAAEKLLNKGIHPTIIAESFQRAAERSVEILLNMSTK--ISLDDKEALVRAASTSLSSKIVSQHSSFLAPLAVDCVLS 182
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: THS_PYRAB (Thermosome subunit OS=Pyrococcus abyssi GN=ths PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.977e-37 Identity = 84/181 (46.41%), Postives = 123/181 (67.96%), Query Frame = 3 Query: 141 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAV 683 G+P ++L E R G DAQ+ N+ A + +A +RT+LGPKGMDKML GD+ ITNDGATIL++MD+ + AK+MVE++++QD E GDGTT VV+AG LL++AE+LL++ IHP + +GY +A+ A E L+ IA+ E +D E L++ MT + K + LA++AV+AV Sbjct: 6 GQPILIL--PEGTQRYVGRDAQRMNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIVIKGYMLAAEKAQEILDSIAK--EVKPDDEEVLLKAAMTAITGKAAEEEREYLAKLAVEAV 182
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: THSA_THEK8 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.663e-37 Identity = 85/181 (46.96%), Postives = 121/181 (66.85%), Query Frame = 3 Query: 141 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAV 683 G+P ++L E R G DAQ+ N+ A + +A +RT+LGPKGMDKML GD+ +TNDGATIL+++D+ + AK+MVE++++QD E GDGTT VV+AG LL +AE+LL++ IHP I +GY +A+ A E LE IA K +D E L++ MT++ K K LA++AV AV Sbjct: 6 GQPVVIL--PEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILEEIAIK--VNPDDEETLLRIAMTSITGKNAESHKELLAKLAVDAV 182
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPD_CAEEL (T-complex protein 1 subunit delta OS=Caenorhabditis elegans GN=cct-4 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.478e-36 Identity = 85/174 (48.85%), Postives = 121/174 (69.54%), Query Frame = 3 Query: 162 RQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAV 683 R++ K + + + +N+ A KAVA +RTSLGP+GMDKM+QS +GDVTITNDGATIL QM V + AK++VELS++QD E GDGTT VVVMAG+LL+ A+ LL +GIHP I+E ++ A+ A + L+ ++ + + L L + T+LNSK+V++ LA +AV AV Sbjct: 19 RERNFKDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVDLSNDAL--LNKMATTSLNSKVVSQHSWLLAPMAVNAV 190
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: THSB_SULTO (Thermosome subunit beta OS=Sulfolobus tokodaii GN=thsB PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36 Identity = 83/181 (45.86%), Postives = 122/181 (67.40%), Query Frame = 3 Query: 141 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAV 683 G P I+L+ E SR G +A + N++A KAV L+++ GP+GMDKML GD+TITNDGATIL++MD+ + AKL+V++++ QD E DGT V++AG L+++AE+LL + IHP I G++ A A++ +E IAQK +ND++ L + MT+LNSK V + LA+I KAV Sbjct: 13 GIPVIILK--EGSSRTYGKEALRINIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVILAGELVKKAEELLYKEIHPTIIVSGFKKAEEQALKTIEEIAQK--VSVNDMDILKKVAMTSLNSKAVAGAREYLADIVAKAV 189
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: THSB_METTH (Thermosome subunit beta OS=Methanobacterium thermoautotrophicum GN=thsB PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36 Identity = 82/180 (45.56%), Postives = 119/180 (66.11%), Query Frame = 3 Query: 144 RPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAV 683 +P ++L E SR G DAQ+ N+ AGK +A +RT+LGPKGMDKML GD+ +TNDG TIL++MD+++ AK++VE++++Q+ E+GDGTT V++AG LL++AE LLE IHP IA GY A+ A E L+ IA +D + L++ MT + K + + LAE+ V AV Sbjct: 6 QPILVL--PEGTSRYLGRDAQRMNILAGKILAETVRTTLGPKGMDKMLVDSLGDIVVTNDGVTILKEMDIEHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKKAENLLEMEIHPTIIAMGYRQAAEKAQEILDDIA----IDASDRDTLMKVAMTAMTGKGTEKAREPLAELIVDAV 179
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPD_SCHPO (T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe GN=cct4 PE=2 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36 Identity = 82/170 (48.24%), Postives = 120/170 (70.59%), Query Frame = 3 Query: 177 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVL 686 + R + + + +N+ A ++VA +RTSLGPKGMDKM+Q+ G+V +TNDGATIL+ + V + AK++V+LS +QD E GDGTT VV++AGS+L AEKLL++GIHP IAE ++ A+ V+ ++ A E L+D E L++ T+LNSK+V++ LA IAV AVL Sbjct: 12 QDREKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHPAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDCMKENALAIE--LSDRESLLRAATTSLNSKIVSQYSNLLAPIAVDAVL 179
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: THSA_ARCFU (Thermosome subunit alpha OS=Archaeoglobus fulgidus GN=thsA PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.521e-36 Identity = 82/181 (45.30%), Postives = 119/181 (65.75%), Query Frame = 3 Query: 141 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAV 683 G P ++L+ E R G DAQ+ N+ A + +A ++++LGPKGMDKML GDV ITNDG TIL++MDV++ AK+++E++++QD E+GDGTT VV+AG LL++AE+LL++ IHP IA GY MA+ AVE LE IA + + D E L + T + K L+ + V+AV Sbjct: 6 GTPVLILK--EGTQRTVGRDAQRMNIMAARVIAEAVKSTLGPKGMDKMLVDSLGDVVITNDGVTILKEMDVEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKKAEELLDQDIHPTVIARGYRMAANKAVEILESIA--MDIDVEDEETLKKIAATAITGKHSEYALDHLSSLVVEAV 182
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: THSB_SULAC (Thermosome subunit beta OS=Sulfolobus acidocaldarius GN=thsB PE=3 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 5.615e-36 Identity = 81/181 (44.75%), Postives = 121/181 (66.85%), Query Frame = 3 Query: 141 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAV 683 G P I+L+ E SR G +A + N++A KAV L+T+ GP+GMDKML GD+TITNDGATIL++MD+ + AKL+V++++ QD E DGT V+ +G L+++AE+LL + IHP I GY+ A +A++ +E I+ K +ND E L + +T+L+SK V + LA+I VKA+ Sbjct: 13 GIPVIILK--EGSSRTYGKEALRINIAAVKAVEEALKTTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEELLYKEIHPTIIVSGYKKAEEMAIKTIEEISTK--VSVNDTEILRKVALTSLSSKAVAGAREHLADIVVKAI 189 The following BLAST results are available for this feature:
BLAST of FC929902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 411
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929902 ID=FC929902; Name=FC929902; organism=Citrus clementina; type=EST; length=689bpback to top |