FC929902
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: THSB_ARCFU (Thermosome subunit beta OS=Archaeoglobus fulgidus GN=thsB PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.615e-36 Identity = 84/181 (46.41%), Postives = 119/181 (65.75%), Query Frame = 3 Query: 141 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAV 683 G+P ++LR E R G DAQ+ N+ A + +A +R++LGPKGMDKML GDV ITNDG TIL+++DV++ AK+++E++++QD E+GDGTT VV+AG LL++AE+LL++ IHP IA GY A+ A+E L IA +D E L + T + K +LAEIAV AV Sbjct: 6 GQPVLILR--EGTQRTVGRDAQRMNIMAARVIAEAVRSTLGPKGMDKMLVDSLGDVVITNDGVTILKEIDVEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKRAEELLDQEIHPAIIANGYRYAAEKALEILNEIA--IPISKDDDEILKKIATTAMTGKGAEVAIDKLAEIAVNAV 182
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: THS2_HALVO (Thermosome subunit 2 OS=Halobacterium volcanii GN=cct2 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.615e-36 Identity = 82/181 (45.30%), Postives = 121/181 (66.85%), Query Frame = 3 Query: 141 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAV 683 G+P I++ E+ R++ DAQ+ N+ A +AVA +R++LGPKGMDKML GDVTITNDG TIL++MD+DN A+++VE++ +Q+ E GDGTT V +AG LL+ AE LLE+ IHP I G+ +AS A E ++ IA++ + +D E L + T++ K K LA++ V+AV Sbjct: 8 GQPMIIMG--EDAQRVKDRDAQEYNIRAARAVAEAVRSTLGPKGMDKMLVDSMGDVTITNDGVTILKEMDIDNPTAEMIVEVAETQEDEAGDGTTTAVAIAGELLKNAEDLLEQDIHPTAIIRGFNLASEKAREEIDDIAERVD--PDDEELLKKVAETSMTGKSSELNKELLADLIVRAV 184
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: THSA_THEK1 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA PE=1 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.334e-36 Identity = 82/181 (45.30%), Postives = 122/181 (67.40%), Query Frame = 3 Query: 141 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAV 683 G+P ++L E R G DAQ+ N+ A + +A +RT+LGPKGMDKML GD+ +TNDGATIL+++D+ + AK+MVE++++QD E GDGTT VV+AG LL +AE+LL++ IHP I +GY +A+ A E L+ IA + + +D E L++ T++ K K LA++AV+AV Sbjct: 6 GQPVVIL--PEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAIRVD--PDDEETLLKIAATSITGKNAESHKELLAKLAVEAV 182
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: THSA_PYRKO (Thermosome subunit alpha OS=Pyrococcus kodakaraensis GN=thsA PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.334e-36 Identity = 82/181 (45.30%), Postives = 122/181 (67.40%), Query Frame = 3 Query: 141 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAV 683 G+P ++L E R G DAQ+ N+ A + +A +RT+LGPKGMDKML GD+ +TNDGATIL+++D+ + AK+MVE++++QD E GDGTT VV+AG LL +AE+LL++ IHP I +GY +A+ A E L+ IA + + +D E L++ T++ K K LA++AV+AV Sbjct: 6 GQPVVIL--PEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAIRVD--PDDEETLLKIAATSITGKNAESHKELLAKLAVEAV 182
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPD_ASHGO (T-complex protein 1 subunit delta OS=Ashbya gossypii GN=CCT4 PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.578e-36 Identity = 81/171 (47.37%), Postives = 121/171 (70.76%), Query Frame = 3 Query: 177 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLA 689 K+R + + +KAN+ A +AVA +RTSLGPKGMDKM+++ G++ I+NDG TIL+QM + + +AK++VE+S +QD E GDGTT VV++ G+LL AEKLL +GIHP IAE ++ A + AVE L ++++ L D LV+ T+L+SK+V++ LA +AV VL+ Sbjct: 13 KNREKPQEVRKANIIAARAVADAIRTSLGPKGMDKMIKTARGEILISNDGHTILKQMAILHPVAKMLVEVSAAQDSEAGDGTTSVVILTGALLGAAEKLLAKGIHPTIIAESFQRAGQRAVEVLLGMSKR--ISLQDRAELVRAASTSLSSKIVSQYSTFLAPLAVDCVLS 181
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: THSB_DESMO (Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis GN=thsB PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.251e-35 Identity = 77/167 (46.11%), Postives = 117/167 (70.06%), Query Frame = 3 Query: 183 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAV 683 R G DA + N+ A +A++ +++T+ GPKGMDKML GDVTITNDGATIL++ ++ + AK++V++++SQD E+GDGT V++AG LL+ AE+LL++ IHP I GY MA A++ L+++A+ + LN+ E L + T+L SK V+ + A+IAVKAV Sbjct: 2 RTTGRDALRTNILAARAISEMIKTTYGPKGMDKMLVDALGDVTITNDGATILDKAEIQHPAAKMLVQVAKSQDSEVGDGTKRAVILAGELLKYAEELLDKNIHPTVIISGYRMAMEEALKILDQMAEPID--LNNEELLRKVARTSLTSKAVHDAREFFADIAVKAV 166
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: THS_METTL (Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.634e-35 Identity = 76/182 (41.76%), Postives = 122/182 (67.03%), Query Frame = 3 Query: 144 RPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLA 689 +P ++L E R G DAQ+ N+ AG+ + +R++LGPKGMDKML GD+ +TNDG TIL++M V++ AK+++E++++Q+ E+GDGTT VV+AG LL +AE+LL++ +HP + +GY++A + A E L+ IA + +D E L + MT++ K + K +L E+ V+AV A Sbjct: 5 QPVVVL--PENVKRFMGRDAQRMNILAGRIIGETVRSTLGPKGMDKMLVDDLGDIVVTNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNVHPTIVIKGYQLAVQKAQEVLKEIA--MDVKADDKEILHKIAMTSITGKGAEKAKEKLGEMIVEAVTA 182
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPD_YARLI (T-complex protein 1 subunit delta OS=Yarrowia lipolytica GN=CCT4 PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.634e-35 Identity = 81/170 (47.65%), Postives = 120/170 (70.59%), Query Frame = 3 Query: 177 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVL 686 K++ + L+ +K+N+ A +AVA +RTSLGPKGMDKM+Q+ G V I+NDG TIL+ M V + AK++V+LS SQD GDGTT VV++AGSLL A+KLL++GIHP IAE ++ A++ A E + +++ + L+D E L++ T+LNSK+V++ LA + V A L Sbjct: 12 KNKEKPLEVRKSNILAARAVADAIRTSLGPKGMDKMIQTARGQVIISNDGNTILQHMAVMHPAAKMLVDLSASQDSVAGDGTTSVVILAGSLLGAADKLLKKGIHPSIIAENFQKAAQRAAEVVMDMSKPID--LSDRETLIRAASTSLNSKIVSQFSSTLAPMLVDAAL 179
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: THSA_THEAC (Thermosome subunit alpha OS=Thermoplasma acidophilum GN=thsA PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.787e-35 Identity = 82/181 (45.30%), Postives = 121/181 (66.85%), Query Frame = 3 Query: 147 PFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLA 689 P ++L+ E R +G +AQ+ N+ A KA+A +RT+LGPKGMDKML GD+ I+NDGATIL++MDV++ AK++VE+S++QD +GDGTT VV++G LL+QAE LL++G+HP I+ GY +A A + ++ IA+K D L + +T L+ K LA++ VKAV A Sbjct: 7 PILVLK--EGTQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK----STDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNA 181
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: THSA_HALSA (Thermosome subunit alpha OS=Halobacterium salinarium GN=thsA PE=3 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 3.640e-35 Identity = 79/180 (43.89%), Postives = 116/180 (64.44%), Query Frame = 3 Query: 144 RPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAV 683 +P I+L E+ R G DAQ N++AGKAVA +RT+LGPKGMDKML G+V +TNDG TIL++MD+++ A ++VE++ +Q+ E+GDGTT VV++G LL +AE LLE+ IH +A+GY A+ A E L+ A + +D E L + T + K K L+++ V+AV Sbjct: 8 QPLIVL--SEDSQRTSGEDAQSMNITAGKAVAESVRTTLGPKGMDKMLVDSSGEVVVTNDGVTILKEMDIEHPAANMIVEVAETQETEVGDGTTTSVVVSGELLSEAETLLEQDIHATTLAQGYRQAAEKAKELLDDAA--IDVSADDTETLEKIAATAMTGKGAENAKGVLSDLVVRAV 183 The following BLAST results are available for this feature:
BLAST of FC929902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 411
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929902 ID=FC929902; Name=FC929902; organism=Citrus clementina; type=EST; length=689bpback to top |