FC929902
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPD_CANGA (T-complex protein 1 subunit delta OS=Candida glabrata GN=CCT4 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.640e-35 Identity = 77/171 (45.03%), Postives = 122/171 (71.35%), Query Frame = 3 Query: 177 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLA 689 K++ + + ++AN+ A +AVA +RTSLGPKGMDKM+++ G++ I+NDG TIL+QM + + +AK++V++S +QD E GDGTT VV++ G+LL A++LL +GIHP IAE ++ A+R +VE L I L+D E L++ T+L+SK+V++ L+ +AV AVL+ Sbjct: 13 KNKEKPQEVRRANIVAARAVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVAKMLVDVSAAQDSEAGDGTTSVVILTGALLGAADRLLNKGIHPTIIAESFQKAARRSVETLLEICH--PVSLDDREDLIRAASTSLSSKIVSQYSSFLSPLAVDAVLS 181
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: THSB_SULSO (Thermosome subunit beta OS=Sulfolobus solfataricus GN=thsB PE=3 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 4.753e-35 Identity = 80/181 (44.20%), Postives = 119/181 (65.75%), Query Frame = 3 Query: 141 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAV 683 G P I+L+ E SR G +A +AN++A KA+ L+++ GP+GMDKML GD+TITNDGATIL++MD+ + KL+V++++ QD E DGT V++AG L ++AE LL + IHP I GY+ A IA++ ++ IAQ +ND + L + +T+L SK V + LA++ VKAV Sbjct: 12 GIPVIILK--EGSSRTYGKEALRANIAAVKAIEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKAEEIALKTIQEIAQPVT--INDTDVLRKVALTSLGSKAVAGAREYLADLVVKAV 188
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPD_YEAST (T-complex protein 1 subunit delta OS=Saccharomyces cerevisiae GN=CCT4 PE=1 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 1.059e-34 Identity = 76/170 (44.71%), Postives = 122/170 (71.76%), Query Frame = 3 Query: 177 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVL 686 K++ + + +KAN+ A ++VA +RTSLGPKGMDKM+++ G++ I+NDG TIL+QM + + +A+++VE+S +QD E GDGTT VV++ G+LL AE+LL +GIHP IA+ ++ A++ +V+ L + K L+D E LV+ T+L+SK+V++ LA +AV +VL Sbjct: 12 KNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHK--VSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVL 179
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: THSB_SULSH (Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.806e-34 Identity = 79/181 (43.65%), Postives = 118/181 (65.19%), Query Frame = 3 Query: 141 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAV 683 G P I+L+ E SR G +A +AN++A KA+ L+++ GP+GMDKM GD+TITNDGATIL++MD+ + KL+V++++ QD E DGT V++AG L ++AE LL + IHP I GY+ A IA++ ++ IAQ +ND + L + +T+L SK V + LA++ VKAV Sbjct: 12 GIPVIILK--EGSSRTYGKEALRANIAAVKAIEEALKSTYGPRGMDKMFVDSLGDITITNDGATILDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKAEEIALKTIQDIAQ--PVSINDTDVLRKVALTSLGSKAVAGAREYLADLVVKAV 188
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: THSB_HALSA (Thermosome subunit beta OS=Halobacterium salinarium GN=thsB PE=3 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.806e-34 Identity = 79/181 (43.65%), Postives = 118/181 (65.19%), Query Frame = 3 Query: 141 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAV 683 G+P I++ ++ R++ DAQ+ N+SA +AVA +R++LGPKGMDKML S GDVT+TNDG TIL++MD+DN A+++VE++ +Q+ E GDGTT V +AG LL+ AE LLER IHP I +GY +A+ A E ++ +A + +D + + T++ K K L+ I AV Sbjct: 9 GQPMIIMG--DDAQRVKDRDAQEHNISAARAVADAVRSTLGPKGMDKMLVSSMGDVTVTNDGVTILQEMDIDNPTAEMIVEVAETQEDEAGDGTTTAVAIAGELLKNAEDLLERDIHPTAIIKGYNLAAEQAREEVDNVA--VDVDPDDKDLIRSVAETSMTGKGAELDKELLSSIIYDAV 185
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: THSA_SULSO (Thermosome subunit alpha OS=Sulfolobus solfataricus GN=thsA PE=3 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 5.256e-34 Identity = 81/170 (47.65%), Postives = 114/170 (67.06%), Query Frame = 3 Query: 147 PFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL------EPLVQTCMTTLNSKMV 638 P +LL+ E SR G DA + N+ A K +A +LR+SLGPKG+DKML GDVTITNDGATI++ M++ + AKL+VE +++QD E+GDGTT VV+AG+LLE+AE LL++ IHP I EGY+ A A+E L ++ + + + DL + L + TTL SK + Sbjct: 4 PVLLLK--EGTSRTTGRDALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIVKDMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYNKALELLPQLGTRID--IKDLNSSVARDTLRKIAFTTLASKFI 169
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: THSA_SULSH (Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.864e-34 Identity = 81/170 (47.65%), Postives = 114/170 (67.06%), Query Frame = 3 Query: 147 PFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL------EPLVQTCMTTLNSKMV 638 P +LL+ E SR G DA + N+ A K +A +LR+SLGPKG+DKML GDVTITNDGATI++ M++ + AKL+VE +++QD E+GDGTT VV+AG+LLE+AE LL++ IHP I EGY+ A A+E L ++ + + + DL + L + TTL SK + Sbjct: 4 PVLLLK--EGTSRTTGRDALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIVKDMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYTKALELLPQLGTRID--IRDLNSSVARDTLRKIAFTTLASKFI 169
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPD_DEBHA (T-complex protein 1 subunit delta OS=Debaryomyces hansenii GN=CCT4 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.171e-33 Identity = 73/163 (44.79%), Postives = 116/163 (71.17%), Query Frame = 3 Query: 198 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVL 686 + +K+N+ A +AV+ +RTSLGPKGMDKM+++ +G++ I+NDGATIL+ M V + A+++V++S +QD E GDGTT V ++ GSLL AEKLL +GIHP I+E ++ A+ + E L ++ K L+D E L++ T+L+SK+V++ L+ +AV +VL Sbjct: 24 EVRKSNILAARAVSDAIRTSLGPKGMDKMIKTKNGEIIISNDGATILKHMAVLHPAARMLVDVSAAQDVEAGDGTTSVAILTGSLLGAAEKLLNKGIHPTLISESFQRAATRSAEVLLEMSHK--ISLDDKEALIRAASTSLSSKIVSQHSSLLSPLAVNSVL 184
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: THSA_AERPE (Thermosome subunit alpha OS=Aeropyrum pernix GN=thsA PE=3 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 1.997e-33 Identity = 76/166 (45.78%), Postives = 113/166 (68.07%), Query Frame = 3 Query: 141 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMV 638 G P ++L+ E R G +A +AN+ A + +A +L++SLGP+G+DKML GD+T+TNDGATI+++M++ + AKL+VE++++QD E+GDGTT VVV+AG+LLE+AEKLL+ +HP I EGY A A+ ++ A E + D L + TTL SK V Sbjct: 5 GYPVLILK--EGTQRTYGREALRANILAARVLAEMLKSSLGPRGLDKMLVDAFGDITVTNDGATIVKEMEIQHPAAKLLVEVAKAQDAEVGDGTTSVVVLAGALLEKAEKLLDENLHPTIIIEGYTKAMEEALRLVDEAAVPVE--VEDDSVLRRIAETTLASKFV 166
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: THSA_SULTO (Thermosome subunit alpha OS=Sulfolobus tokodaii GN=thsA PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.912e-33 Identity = 75/168 (44.64%), Postives = 117/168 (69.64%), Query Frame = 3 Query: 147 PFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEF-GLNDL---EPLVQTCMTTLNSKMV 638 P +LL++ ++S G DA K N+ A +A +L++SLGP+G+DKML GDVTITNDGATI+++M++ + AKL+VE +++QD E+GDGTT VV+AG LL++A+ LL++ IHP I EGY+ A ++E ++++A K + LN L + L + TT++SK + Sbjct: 5 PVLLLKEGTQRSS--GRDALKNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITNDGATIVKEMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKADDLLDQNIHPTIIIEGYKKALNKSLEIIDQLATKIDVSNLNSLATRDQLKKIVYTTMSSKFI 170 The following BLAST results are available for this feature:
BLAST of FC929902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 411
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929902 ID=FC929902; Name=FC929902; organism=Citrus clementina; type=EST; length=689bpback to top |