FC929902
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPD_DICDI (T-complex protein 1 subunit delta OS=Dictyostelium discoideum GN=cct4 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.691e-32 Identity = 76/164 (46.34%), Postives = 113/164 (68.90%), Query Frame = 3 Query: 198 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLA 689 D + +N+ A +AVA +RTSLGPKGMDKM+ SP+ +V I+NDGATIL+ +++ + AK++ EL+++QD E GDGTT V V+AGSLL +L+ +GIHP I+E + +A ++E L ++ L D LV++ T+LNSK+V++ LA IAV AVL+ Sbjct: 26 DVRTSNIVAARAVADAIRTSLGPKGMDKMIISPNNEVLISNDGATILQNLELRHPAAKMLAELAKAQDIEAGDGTTSVCVIAGSLLGAVSQLMAKGIHPSIISEAFNLALNKSLEVL--VSMSVPVSLTDRVSLVKSATTSLNSKVVSQ-YTNLASIAVDAVLS 186
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: THSA_SULAC (Thermosome subunit alpha OS=Sulfolobus acidocaldarius GN=thsA PE=3 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 3.766e-32 Identity = 73/163 (44.79%), Postives = 113/163 (69.33%), Query Frame = 3 Query: 168 QEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLE------PLVQTCMTTLNSKMV 638 +E SR G DA + N+ A +A +L++SLGP+G+DKML GDVTITNDGATI+++M++ + AKL+VE +++QD E+GDGTT VV+AG LL++AE+LLE+ +HP I +GY+ A A+E +++++ K + +NDL L + TT++SK + Sbjct: 9 KEGTSRSSGRDALRNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITNDGATIVKEMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKAEELLEQNVHPTIIIDGYKKALTKALEIIDQLSLKID--VNDLSSPTAKAQLKKIVSTTMSSKFI 169
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: THS3_HALVO (Thermosome subunit 3 OS=Halobacterium volcanii GN=cct3 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.431e-31 Identity = 69/149 (46.31%), Postives = 100/149 (67.11%), Query Frame = 3 Query: 171 EEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMT 617 E +R G AQ +N+ AGKAVA +RT+LGP+GMDKML G+V ITNDGATILE+MD+++ A+++VE+S++Q+ E+GDGTT V+ G LL AE LL+ +HP I EGY A+RIA + ++ + + L + ++ MT Sbjct: 14 EGTNRTHGRSAQDSNIRAGKAVAEAVRTTLGPRGMDKMLVDSSGEVVITNDGATILEKMDIEHPAAQMLVEVSQTQEEEVGDGTTTAAVLTGELLAHAEDLLDDDLHPTVIVEGYTEAARIAQDAIDDMVLDVTLDDDLLRKVAESSMT 162
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPA_SCHMA (T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.439e-31 Identity = 70/171 (40.94%), Postives = 112/171 (65.50%), Query Frame = 3 Query: 183 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL--EPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLA 689 R G +K NV A + A ++TSLGP G+DKML GDVTITNDGATIL+ +DV++ AK++V+L++ QD E+GDGTT VV++A +LL+ A++L+ R +HP + GY +A R A ++++ + + +N L L+ T ++SK++N +++AV A++A Sbjct: 8 RTSGESVRKQNVLAACSFANFVKTSLGPVGLDKMLVDDVGDVTITNDGATILKLLDVEHPAAKILVQLAQLQDEEVGDGTTSVVILAAALLKNADELISRFVHPTTVINGYRLACREACKYIQ---EHMAYDVNKLGKAGLINVARTAMSSKLINLDADMFSQMAVDALMA 175
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPA_ARATH (T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.439e-31 Identity = 75/170 (44.12%), Postives = 112/170 (65.88%), Query Frame = 3 Query: 183 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHL-ERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLA 689 R G D + NV A +AV+ I++TSLGP G+DKML GDVTITNDGATIL ++V++ AK++VEL+ QD E+GDGTT VV++A LL++A L+ IHP I GY +A R + +++ E++ K E L + PL+ T+++SK+++ A + V+AVL+ Sbjct: 14 RQSGQDVRTQNVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRESCKYIEEKLVTKVE-KLGKV-PLINCAKTSMSSKLISGDSDFFANLVVEAVLS 181
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPB_CAEEL (T-complex protein 1 subunit beta OS=Caenorhabditis elegans GN=cct-2 PE=2 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 9.277e-31 Identity = 74/170 (43.53%), Postives = 112/170 (65.88%), Query Frame = 3 Query: 189 RGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPD----GDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVL 686 RG A+ ++ A+ +++++LGPKGMDK+L S + G + +TNDGATIL+ + VDN AK++V++S +QD+E+GDGTT V V+A LL++AEKL+ + IHP I GY A IA E L++ E G N + L++ TTL SK++++ K A++AV AVL Sbjct: 15 RGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLKK--SSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDAVL 182
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPA_TETPY (T-complex protein 1 subunit alpha OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.582e-30 Identity = 71/169 (42.01%), Postives = 112/169 (66.27%), Query Frame = 3 Query: 183 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL--EPLVQTCMTTLNSKMVNRCKRRLAEIAVKAV 683 R +G D + NV+A A+A I+++SLGP+G+DKML GDVTITNDGATIL Q++V + AK++VELS+ QD E+GDGTT VV++A LL++A +L++ +HP I G+++A++ A + I + + +L E L+ T+++SK++ ++I V AV Sbjct: 11 RDQGQDVRTNNVTAVMAIANIVKSSLGPQGLDKMLVDDVGDVTITNDGATILRQLEVQHPAAKVIVELSQLQDKEVGDGTTSVVILAAELLKRANELIKNKVHPTSIITGFKIAAKEACTY---IKEHLAISVEELGREALINAAKTSMSSKLIGPESNLFSQIVVDAV 176
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPG_OXYGR (T-complex protein 1 subunit gamma OS=Oxytricha granulifera PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.853e-30 Identity = 75/181 (41.44%), Postives = 107/181 (59.12%), Query Frame = 3 Query: 144 RPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEF-GLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAV 683 R + + Q K R +G AQ AN+ A +AV+ I+RT+LGPK M KML P G + +TNDG IL ++DV + AK M+EL+R+QD E+GDGTT V+++AG +L E LER IHP I Y A V E + + NDL+ +V +C+ T K ++ + ++AVKAV Sbjct: 4 RAAVFILNQNAK-REQGRKAQTANIKAARAVSDIVRTTLGPKSMLKMLLDPMGGIVLTNDGNAILREIDVAHPAAKSMIELARAQDEEVGDGTTSVIILAGEILSAVESFLERDIHPTVIVGAYFQALEEIVRLTESYGEPIDIENENDLQKIVSSCIGT---KFSSKWGNLIVDLAVKAV 180
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPA_SCHPO (T-complex protein 1 subunit alpha OS=Schizosaccharomyces pombe GN=cct1 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.853e-30 Identity = 69/169 (40.83%), Postives = 107/169 (63.31%), Query Frame = 3 Query: 183 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLA 689 ++ G D + NV A A+A ++++SLGP G+DKML GDVT+TNDGATIL +DV++ K++VEL++ QD E+GDGTT VV++A LL +A +L++ IHP I GY +A R AV+ + + L E L+ T+++SK++ + +AV A+L+ Sbjct: 16 KISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFMTDVLSCSVDSLGK-ESLINVAKTSMSSKIIGNDSDFFSTMAVDAMLS 183
BLAST of FC929902 vs. ExPASy Swiss-Prot
Match: TCPH_BOVIN (T-complex protein 1 subunit eta OS=Bos taurus GN=CCT7 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.285e-29 Identity = 70/182 (38.46%), Postives = 117/182 (64.29%), Query Frame = 3 Query: 147 PFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA--QKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVL 686 P ILL++ + S+ G+ +N+SA + +A +RT+LGP+GMDK++ G TI+NDGATIL+ +DV + AK +V++++SQD E+GDGTT V ++A L+Q + +E G+HP I + A+++AV ++ IA K E + + L + MT L+SK++++ K A++ V AV+ Sbjct: 5 PVILLKEGTDSSQ--GIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVM 184 The following BLAST results are available for this feature:
BLAST of FC929902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 411
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929902 ID=FC929902; Name=FC929902; organism=Citrus clementina; type=EST; length=689bpback to top |