FC929905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929905 vs. ExPASy Swiss-Prot
Match: RS6_CHICK (40S ribosomal protein S6 OS=Gallus gallus GN=RPS6 PE=2 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.813e-62 Identity = 128/211 (60.66%), Postives = 152/211 (72.04%), Query Frame = 2 Query: 74 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEKEQRIAKAKAEAA 706 MK NI+ P TGCQK +E+DD++ +R F++KR++ EV+ D+LGEE+KGYV +I GG DKQGFPMKQGVLT GRVRLLL +G C+ CIV +LSVLNLVIVKKGE D+PGLTDT PR GPKRAS+IRKLFNLSKEDDVR+YV R+ + K +KAPKIQRLVTP LQ KR RIA K+QR K K EAA Sbjct: 1 MKLNISFPATGCQKLIEVDDERNVRTFYEKRMATEVAADSLGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTQKNKEEAA 207
BLAST of FC929905 vs. ExPASy Swiss-Prot
Match: RS6_ONCMY (40S ribosomal protein S6 OS=Oncorhynchus mykiss GN=rps6 PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 5.304e-61 Identity = 125/211 (59.24%), Postives = 152/211 (72.04%), Query Frame = 2 Query: 74 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEKEQRIAKAKAEAA 706 MK NI+ P TGCQK +E+DD++KLR F++KR++ EV+ D LG+E+KGY+ +I GG DKQGFPMKQGVLT GRVRLLL +G C+ CI +LSVLNLVI+KKGE D+PGLTD+ PR GPKRASKIRKLFNL+KEDDVR+YV RR T + K +KAP+IQRLVTP LQ KR RIA K+QR K K EA+ Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYMVRISGGNDKQGFPMKQGVLTHGRVRLLLAKGHSCY--RPRRTGERKRKSVRGCIGDANLSVLNLVIIKKGEKDIPGLTDSTVPRRLGPKRASKIRKLFNLAKEDDVRQYV--VRRPLTKEGKKPRTKAPRIQRLVTPRVLQHKRRRIALKKQRTQKNKEEAS 207
BLAST of FC929905 vs. ExPASy Swiss-Prot
Match: RS6_XENLA (40S ribosomal protein S6 OS=Xenopus laevis GN=rps6 PE=2 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 6.928e-61 Identity = 125/211 (59.24%), Postives = 151/211 (71.56%), Query Frame = 2 Query: 74 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEKEQRIAKAKAEAA 706 MK NI+ P TGCQK +E++D++KLR F++KR++ EV+ D LG+E+KGYV +I GG DKQGFPMKQGVLT GRVRLLL +G C+ CIV +LSVLNLVIV+KGE D+PGLTD PR GPKRAS+IRKLFNLSKEDDVR+YV R+ + K +KAPKIQRLVTP LQ KR RIA K+QR K K EA+ Sbjct: 1 MKLNISFPATGCQKLIEVEDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVRKGEKDIPGLTDNTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLAKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTQKNKEEAS 207
BLAST of FC929905 vs. ExPASy Swiss-Prot
Match: RS6_BRAFL (40S ribosomal protein S6 OS=Branchiostoma floridae GN=RPS6 PE=3 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 3.801e-59 Identity = 122/212 (57.55%), Postives = 150/212 (70.75%), Query Frame = 2 Query: 74 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVS-KAPKIQRLVTPLTLQRKRARIAEKEQRIAKAKAEAA 706 MK NI+ P TGCQK +E+DD++KLR F++KR+S +++ ++LG+E+KGY+ +I GG DKQGFPMKQGVLT GRVRLLL +G C+ CIV +LSVLNLVI+KKGE D+PGLTDT PR GPKRA +IRKLFNL+KEDDVR+YV RR K GKK K PKIQRL+TP LQRKR A K +R AK + E A Sbjct: 1 MKINISYPATGCQKLIEVDDERKLRPFYEKRMSHQMTAESLGDEWKGYLVRISGGNDKQGFPMKQGVLTNGRVRLLLGKGHSCY--RPRRTGERKRKSVRGCIVDSNLSVLNLVILKKGEQDIPGLTDTTIPRRLGPKRAGRIRKLFNLNKEDDVRQYV--VRRPLPQKEGKKQKFKTPKIQRLITPQRLQRKRHMRAVKRRRYAKQREEEA 208
BLAST of FC929905 vs. ExPASy Swiss-Prot
Match: RS6_TOBAC (40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum GN=RPS6 PE=2 SV=2) HSP 1 Score: 227.254 bits (578), Expect = 6.484e-59 Identity = 123/166 (74.10%), Postives = 132/166 (79.52%), Query Frame = 2 Query: 209 KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEKEQRIAKAKAEAA 706 KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL+RGTPCF CIVSPDLSVLNLVIVKKGE+DLPGLTDTEKPRMRGP+ + L+ KEDDVRKYVNT FTTK K SKAPKIQRLVTPLTLQRKRARIA+K++RIAKAK+EAA Sbjct: 1 KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPREPQRSEALY--FKEDDVRKYVNT-TAEFTTKW--KGSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAA 161
BLAST of FC929905 vs. ExPASy Swiss-Prot
Match: RS6_GLOMM (40S ribosomal protein S6 OS=Glossina morsitans morsitans GN=RpS6 PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 8.468e-59 Identity = 123/212 (58.02%), Postives = 147/212 (69.34%), Query Frame = 2 Query: 74 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKK-VSKAPKIQRLVTPLTLQRKRARIAEKEQRIAKAKAEAA 706 MK N++ P TGCQK E++D+ KLR F++K + Q V D LG+E+KGY+ +I GG DKQGFPMKQGVLT RVRLLL +G C+ CIV ++SVL LVIVKKGE D+PGLTDT PR GPKRASKIRKL+NLSK DDVR YV RR K KK +SKAPKIQRL+TP+ LQRKR RIA K++R A +K AA Sbjct: 1 MKLNVSYPATGCQKLFEVNDEHKLRVFYEKHMGQVVEADILGDEWKGYMLRISGGNDKQGFPMKQGVLTHDRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDANMSVLALVIVKKGEKDIPGLTDTSVPRRLGPKRASKIRKLYNLSKVDDVRPYV--IRRPLPAKDNKKAISKAPKIQRLITPVVLQRKRRRIALKKKRQAASKEAAA 208
BLAST of FC929905 vs. ExPASy Swiss-Prot
Match: RS6_SPOFR (40S ribosomal protein S6 OS=Spodoptera frugiperda GN=RpS6 PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.597e-57 Identity = 120/211 (56.87%), Postives = 147/211 (69.67%), Query Frame = 2 Query: 74 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVS----KAPKIQRLVTPLTLQRKRARIAEKEQRIAKAK 694 MK N++ P TGCQK E+ D+ KLR F++KR+ EV D LG+E+KGYV +I GG DKQGFPMKQGVLT RVRLL+ +G C+ CIV +LSVL LVIV+KGE ++PGLTD PR GPKRASKIRKLFNLSKEDDVR+YV +R K GK+ + KAPKIQRLVTP+ LQR+R R+A K++R+AK K Sbjct: 1 MKLNVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRIAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCY--RPRRDGERKRKSVRGCIVDANLSVLALVIVRKGEQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV--VKRLLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRRHRLALKKKRLAKRK 207
BLAST of FC929905 vs. ExPASy Swiss-Prot
Match: RS6_DROME (40S ribosomal protein S6 OS=Drosophila melanogaster GN=RpS6 PE=1 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.597e-57 Identity = 121/212 (57.08%), Postives = 148/212 (69.81%), Query Frame = 2 Query: 74 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKK-VSKAPKIQRLVTPLTLQRKRARIA-EKEQRIAKAKAEA 703 MK N++ P TGCQK E+ D+ KLR F++KR+ Q V D LG+E+KGY +I GG DKQGFPMKQGVLT GRVRLLL +G C+ CIV ++SVL LV++KKGE D+PGLTDT PR GPKRASKIRKL+NLSKEDDVR++V RR K KK SKAPKIQRL+TP+ LQRK RIA +K+++IA +A A Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFV--VRRPLPAKDNKKATSKAPKIQRLITPVVLQRKHRRIALKKKRQIASKEASA 208
BLAST of FC929905 vs. ExPASy Swiss-Prot
Match: RS6_AEDAE (40S ribosomal protein S6 OS=Aedes aegypti GN=RpS6 PE=2 SV=2) HSP 1 Score: 222.631 bits (566), Expect = 1.597e-57 Identity = 120/212 (56.60%), Postives = 150/212 (70.75%), Query Frame = 2 Query: 74 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKV-SKAPKIQRLVTPLTLQRKRARIAEKEQRI-AKAKAEA 703 MK N++ P TG QK E+ DD KLR F+DKR+ E++ D LG+E+KGYVFKI GG DKQGFPMKQGVLT RVRLLL +G C+ CIV +LS L L++VKKGE D+PGLTDT PR GPKRAS IRKL+NL+KEDDVR++V +R K GKK +KAPKIQRL+TP+ LQRKR R+A K++R+ ++ +AEA Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQGFPMKQGVLTNTRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKDIPGLTDTTVPRRLGPKRASNIRKLYNLTKEDDVRQFV--VKRPLPEKDGKKARTKAPKIQRLITPVVLQRKRHRLAIKKRRVESRKEAEA 208
BLAST of FC929905 vs. ExPASy Swiss-Prot
Match: RS6B_SCHPO (40S ribosomal protein S6-B OS=Schizosaccharomyces pombe GN=rps6b PE=1 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.597e-57 Identity = 123/212 (58.02%), Postives = 143/212 (67.45%), Query Frame = 2 Query: 74 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKK-VSKAPKIQRLVTPLTLQRKRARIAEKEQRIAKAKAEAA 706 MK NI+ P G QK +EIDDD++LR F +KR+ QEV GD++G EF GYVFKI GG DKQGFPM QGVL P RVRLLL G PC+ CIV DL+VL L IVK+GE D+PGLTD P+ GPKRASKIR+ FNLSKEDDVR++V R K GKK +KAPKIQRLVTP TLQ KR R A K ++ K + EAA Sbjct: 1 MKLNISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQGFPMFQGVLLPHRVRLLLRAGHPCY--RPRRDGERKRKSVRGCIVGQDLAVLALAIVKQGEQDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV-IRREVVPKKEGKKPYTKAPKIQRLVTPRTLQHKRHRFALKRRQAEKNREEAA 209 The following BLAST results are available for this feature:
BLAST of FC929905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929905 ID=FC929905; Name=FC929905; organism=Citrus clementina; type=EST; length=707bpback to top |