FC929906

Overview
NameFC929906
Unique NameFC929906
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: CIPK5_ARATH (CBL-interacting serine/threonine-protein kinase 5 OS=Arabidopsis thaliana GN=CIPK5 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.896e-18
Identity = 54/166 (32.53%), Postives = 90/166 (54.22%), Query Frame = 2
Query:  197 DENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQ--PGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            +E    +  +Y   R +G G++ KV   +  + G+  AIK  +K  + K         M  ++RE+ IMK+++HPNIV L EV+        + V+E+V+G    + F +   G + E  AR+Y + ++S + Y H   V H D+KP+NLL+  +G +KI DF +S
Sbjct:    2 EEERRVLFGKYEMGRLLGKGTFAKVYYGKEIIGGECVAIKVINKDQVMK-----RPGMMEQIKREISIMKLVRHPNIVELKEVM--ATKTKIFFVMEFVKG---GELFCKISKGKLHEDAARRYFQQLISAVDYCHSRGVSHRDLKPENLLLDENGDLKISDFGLS 157          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: STK11_XENLA (Serine/threonine-protein kinase 11 OS=Xenopus laevis GN=stk11 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18
Identity = 56/174 (32.18%), Postives = 89/174 (51.15%), Query Frame = 2
Query:  170 ESNKLIRSEDENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEY-VEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            +S ++I        K++ +Y+    +G GSYGKV   +  LD      +A       KLR  P+  A  +V++E+ +++ L+H N++ L++V+ +      YMV+EY V G  +     Q        A  Y   ++ GL YLH   +VH DIKP NLL+   GT+KI D  V+
Sbjct:   33 DSTEVIYQPRRKRAKLVGKYLMGDLLGEGSYGKV---KEMLDSDTLCRRAVKILKKKKLRRIPNGEA--NVKKEIQLLRRLRHRNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVQDKHFPVFQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTDGTLKISDLGVA 201          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: STK11_CHICK (Serine/threonine-protein kinase 11 OS=Gallus gallus GN=STK11 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18
Identity = 56/174 (32.18%), Postives = 90/174 (51.72%), Query Frame = 2
Query:  170 ESNKLIRSEDENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEY-VEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            +S ++I        K+I +Y+    +G GSYGKV   +  LD +    +A       KLR  P+  A  +V++E+ +++ L+H N++ L++V+ +      YMV+EY V G  +              A  Y   ++ GL YLH   +VH DIKP NLL+  +GT+KI D  V+
Sbjct:   30 DSTEVIYQPRRKRAKLIGKYLMGDLLGEGSYGKV---KEMLDSETLCRRAVKILKKKKLRRIPNGEA--NVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVFQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTNGTLKISDLGVA 198          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: CIPK5_ORYSJ (CBL-interacting protein kinase 5 OS=Oryza sativa subsp. japonica GN=CIPK5 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18
Identity = 54/166 (32.53%), Postives = 90/166 (54.22%), Query Frame = 2
Query:  197 DENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQP--GAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            ++  + ++N Y   R +G G++ KV   R+    +  AIK   K  +  LRV      +  ++RE+ IM++++HPNIV L EV+   +    Y  +EYV G    + F +   G + E  ARKY + ++  + + H   V H D+KP+NLLV  +G +K+ DF +S
Sbjct:    2 EKKASILMNRYELGRMLGQGTFAKVYHARNLASNQSVAIKVIDKEKV--LRVG----MIDQIKREISIMRLVRHPNIVQLHEVM--ASKSKIYFAMEYVRG---GELFSRVARGRLKEDAARKYFQQLIGAVDFCHSRGVYHRDLKPENLLVDENGNLKVSDFGLS 156          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: CDPK4_PLAYO (Calcium-dependent protein kinase 4 OS=Plasmodium yoelii yoelii GN=CPK4 PE=3 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18
Identity = 55/168 (32.74%), Postives = 90/168 (53.57%), Query Frame = 2
Query:  200 ENGTKMINE-YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSG----TVKIGDFSVS 688
            +N   + NE Y  ++ +G GS+G+V+L +    G  YAIK   K H+ +      +T    + REV ++KML H NI+ L E  +D N  ++Y+V +   G    D         E  A + ++ ++SG+ Y+H +NVVH D+KP+N+L+         +KI DF +S
Sbjct:   60 QNSNVVFNEQYKGIKILGKGSFGEVILSKDKHTGHEYAIKVISKKHVKR------KTDKQSLLREVELLKMLDHINIMKLYEFFEDNN--YYYLVSDVYSGGELFDEIISRKRFYEVDAARIIKQVLSGITYMHKNNVVHRDLKPENILLETKNKEDMIIKIIDFGLS 219          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: CDPK4_PLABA (Calcium-dependent protein kinase 4 OS=Plasmodium berghei (strain Anka) GN=CPK4 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18
Identity = 55/168 (32.74%), Postives = 90/168 (53.57%), Query Frame = 2
Query:  200 ENGTKMINE-YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSG----TVKIGDFSVS 688
            +N   + NE Y  ++ +G GS+G+V+L +    G  YAIK   K H+ +      +T    + REV ++KML H NI+ L E  +D N  ++Y+V +   G    D         E  A + ++ ++SG+ Y+H +NVVH D+KP+N+L+         +KI DF +S
Sbjct:   60 QNSNVVFNEQYKGIKILGKGSFGEVILSKDKHTGHEYAIKVISKKHVKR------KTDKQSLLREVELLKMLDHINIMKLYEFFEDNN--YYYLVSDVYSGGELFDEIISRKRFYEVDAARIIKQVLSGITYMHKNNVVHRDLKPENILLETKNKEDMIIKIIDFGLS 219          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: STK11_HUMAN (Serine/threonine-protein kinase 11 OS=Homo sapiens GN=STK11 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.176e-17
Identity = 56/174 (32.18%), Postives = 89/174 (51.15%), Query Frame = 2
Query:  170 ESNKLIRSEDENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEY-VEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            +S ++I        K+I +Y+    +G GSYGKV   +  LD +    +A       KLR  P+  A  +V++E+ +++ L+H N++ L++V+ +      YMV+EY V G  +              A  Y   ++ GL YLH   +VH DIKP NLL+   GT+KI D  V+
Sbjct:   30 DSTEVIYQPRRKRAKLIGKYLMGDLLGEGSYGKV---KEVLDSETLCRRAVKILKKKKLRRIPNGEA--NVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISDLGVA 198          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: NUAK2_RAT (NUAK family SNF1-like kinase 2 OS=Rattus norvegicus GN=Nuak2 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.176e-17
Identity = 55/156 (35.26%), Postives = 82/156 (52.56%), Query Frame = 2
Query:  221 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            + Y  +  +G G+YGKV   R S  G+  AIK+  K  +        E  +  +RRE+ IM  L HP+I+ + EV +  NS    +V+EY       D   +   + E  AR + R IVS L Y H + +VH D+K +N+L+  SG +KI DF +S
Sbjct:   55 HRYEFLETLGKGTYGKVKKARES-SGRLVAIKSIRKDKIK------DEQDLLHIRREIEIMSSLNHPHIIAIHEVFE--NSSKIVIVMEYASRGDLYDYISERPRLNERDARHFFRQIVSALHYCHQNGIVHRDLKLENILLDASGNIKIADFGLS 201          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: NUAK2_PONAB (NUAK family SNF1-like kinase 2 OS=Pongo abelii GN=NUAK2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.176e-17
Identity = 59/183 (32.24%), Postives = 93/183 (50.82%), Query Frame = 2
Query:  140 GLICRQFPVKESNKLIRSEDENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            GLI    P+ +   + R   ++  +  + Y  +  +G G+YGKV   R S  G+  AIK+  K  +        E  +  +RRE+ IM  L HP+I+ + EV +  NS    +V+EY       D   +   + E  AR + R IVS + Y H + VVH D+K +N+L+  +G +KI DF +S
Sbjct:   26 GLIKSPKPLMKKQAVKRHHHKHNLR--HRYEFLETLGKGTYGKVKKARES-SGRLVAIKSIRKDKIK------DEQDLMHIRREIEIMSSLNHPHIIAIHEVFE--NSSKIVIVMEYASRGDLYDYISERQQLSEREARHFFRQIVSAVHYCHQNRVVHRDLKLENILLDANGNIKIADFGLS 197          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: NUAK2_HUMAN (NUAK family SNF1-like kinase 2 OS=Homo sapiens GN=NUAK2 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.176e-17
Identity = 59/183 (32.24%), Postives = 93/183 (50.82%), Query Frame = 2
Query:  140 GLICRQFPVKESNKLIRSEDENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            GLI    P+ +   + R   ++  +  + Y  +  +G G+YGKV   R S  G+  AIK+  K  +        E  +  +RRE+ IM  L HP+I+ + EV +  NS    +V+EY       D   +   + E  AR + R IVS + Y H + VVH D+K +N+L+  +G +KI DF +S
Sbjct:   26 GLIKSPKPLMKKQAVKRHHHKHNLR--HRYEFLETLGKGTYGKVKKARES-SGRLVAIKSIRKDKIK------DEQDLMHIRREIEIMSSLNHPHIIAIHEVFE--NSSKIVIVMEYASRGDLYDYISERQQLSEREARHFFRQIVSAVHYCHQNRVVHRDLKLENILLDANGNIKIADFGLS 197          
The following BLAST results are available for this feature:
BLAST of FC929906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CIPK5_ARATH6.896e-1832.53CBL-interacting serine/threonine-protein kinase 5 ... [more]
STK11_XENLA9.006e-1832.18Serine/threonine-protein kinase 11 OS=Xenopus laev... [more]
STK11_CHICK9.006e-1832.18Serine/threonine-protein kinase 11 OS=Gallus gallu... [more]
CIPK5_ORYSJ9.006e-1832.53CBL-interacting protein kinase 5 OS=Oryza sativa s... [more]
CDPK4_PLAYO9.006e-1832.74Calcium-dependent protein kinase 4 OS=Plasmodium y... [more]
CDPK4_PLABA9.006e-1832.74Calcium-dependent protein kinase 4 OS=Plasmodium b... [more]
STK11_HUMAN1.176e-1732.18Serine/threonine-protein kinase 11 OS=Homo sapiens... [more]
NUAK2_RAT1.176e-1735.26NUAK family SNF1-like kinase 2 OS=Rattus norvegicu... [more]
NUAK2_PONAB1.176e-1732.24NUAK family SNF1-like kinase 2 OS=Pongo abelii GN=... [more]
NUAK2_HUMAN1.176e-1732.24NUAK family SNF1-like kinase 2 OS=Homo sapiens GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34001G01EF PostHarvC1 Citrus clementina cDNA clone C34001G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929906 ID=FC929906; Name=FC929906; organism=Citrus clementina; type=EST; length=690bp
GTTAGGAGATGATATAGATGATGATGATGATGATAATTCATACAACGGCG
AGGCTACTAATACAGCAGATGGAGATGGTGGTGAGATGCAGAACCATGCC
AAACGATCTGAAGAGATTTTTAGGGAAAGAGAACTGAATGGACTGATTTG
CAGGCAATTTCCAGTTAAGGAATCTAATAAACTCATTCGATCAGAGGATG
AAAATGGGACTAAGATGATCAATGAGTATGTACATGTACGTAAGATTGGT
GCCGGTAGCTATGGGAAAGTGGTCCTTTATCGAAGCTCCTTAGATGGAAA
GCATTATGCAATTAAGGCTTTTCATAAGTCTCATTTGTCAAAGCTGCGAG
TTGCCCCTTCAGAGACGGCTATGACTGATGTTCGTCGTGAGGTTCTAATC
ATGAAAATGTTGCAACATCCAAATATAGTTAATCTGATTGAGGTGATTGA
TGACCCAAACTCAGATCACTTCTACATGGTTCTTGAATATGTGGAAGGAA
AATGGGACAATGATGGGTTTGGTCAACCAGGGGCCATTGGAGAGAGTATG
GCTAGAAAGTATTTGCGGGACATAGTATCTGGGTTGATGTACCTGCATGG
ACATAATGTAGTGCATGGAGACATAAAACCCGATAATCTGTTAGTTGCGC
CGAGTGGTACAGTGAAGATTGGAGATTTTAGTGTCAGCCA
back to top