FC929906

Overview
NameFC929906
Unique NameFC929906
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: DCLK2_HUMAN (Serine/threonine-protein kinase DCLK2 OS=Homo sapiens GN=DCLK2 PE=2 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 53/183 (28.96%), Postives = 91/183 (49.73%), Query Frame = 2
Query:  170 ESNKLIRSEDENGTK------MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVA--PSGT--VKIGDFSVS 688
            E ++ I  E  NG +      ++ +Y   + IG G++  V        GK +A+K      + K +    E     +  EV I++ ++HPNI+ L+E ++   +   ++V+E V+G    D         E      + ++ + L YLHG ++VH DIKP+NLLV   P GT  +K+GDF ++
Sbjct:  369 ELDRCISPEGVNGNRCSESSTLLEKYKIGKVIGDGNFAVVKECIDRSTGKEFALKI-----IDKAKCCGKEHL---IENEVSILRRVKHPNIIMLVEEME--TATELFLVMELVKGGDLFDAITSSTKYTERDGSAMVYNLANALRYLHGLSIVHRDIKPENLLVCEYPDGTKSLKLGDFGLA 541          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: CRK1_LEIME (Cell division protein kinase 2 homolog CRK1 OS=Leishmania mexicana GN=CRK1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 46/159 (28.93%), Postives = 83/159 (52.20%), Query Frame = 2
Query:  215 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR-REVLIMKMLQHPNIVNLIEVIDDPNSDH-FYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSV 685
            M + Y    KIG G+YG V   R +      A+K        ++R+   E  +     RE+ ++K L+H NIV L++V    +S+H   +V EY++         + G +  +  + ++RD++ G+ + H  +V+H D+KP NLL++    +K+GDF +
Sbjct:    1 MTSRYERQEKIGEGTYGVVYKARDTSTAATVALK--------RIRLDSEEEGVPCTAIREISLLKELRHENIVKLLDVC---HSEHRLTIVFEYLDLDLKKYLDRENGNLDAATIQHFMRDLLRGVAFCHQRSVLHRDLKPQNLLISREKELKLGDFGL 148          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: CDKL1_RAT (Cyclin-dependent kinase-like 1 OS=Rattus norvegicus GN=Cdkl1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 44/154 (28.57%), Postives = 72/154 (46.75%), Query Frame = 2
Query:  218 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDF 679
            + +Y  + KIG GSYG V   R+   G+  AIK F       L             RE+ ++K L+HPN+V+L+EV       H  +V EY      ++       + E + +      +  + + H HN +H D+KP+N+L+     +K+ DF
Sbjct:    1 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKRF-------LETEDDPVIKKIALREIRMLKQLKHPNLVSLLEVFRRKRRLH--LVFEYCHHTVLHELDRYQRGVPEPLVKNITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDF 145          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: CDK16_RAT (Cell division protein kinase 16 OS=Rattus norvegicus GN=Cdk16 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 49/166 (29.52%), Postives = 78/166 (46.99%), Query Frame = 2
Query:  191 SEDENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            S  E G   +  Y+ + K+G G+Y  V   +S L     A+K        ++R+   E A     REV ++K L+H NIV L ++I    S    +V EY++             I     + +L  ++ GL Y H   V+H D+KP NLL+   G +K+ DF ++
Sbjct:  153 SLSEIGFGKLETYIKLDKLGEGTYATVYKGKSKLTDNLVALK--------EIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKS--LTLVFEYLDKDLKQYLDDCGNVINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLA 308          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: CDK16_MOUSE (Cell division protein kinase 16 OS=Mus musculus GN=Cdk16 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 49/166 (29.52%), Postives = 78/166 (46.99%), Query Frame = 2
Query:  191 SEDENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            S  E G   +  Y+ + K+G G+Y  V   +S L     A+K        ++R+   E A     REV ++K L+H NIV L ++I    S    +V EY++             I     + +L  ++ GL Y H   V+H D+KP NLL+   G +K+ DF ++
Sbjct:  153 SLSEIGFGKLETYIKLDKLGEGTYATVYKGKSKLTDNLVALK--------EIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKS--LTLVFEYLDKDLKQYLDDCGNVINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLA 308          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: CDK15_HUMAN (Cell division protein kinase 15 OS=Homo sapiens GN=CDK15 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 46/156 (29.49%), Postives = 79/156 (50.64%), Query Frame = 2
Query:  221 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            + Y+++ K+G GSY  V    S ++G+  A+K    +       A      T +R E  ++K L+H NIV L ++I    +  F  V EY+           PG +     R ++  ++ GL Y+H  +V+H D+KP NLL++  G +K+ DF ++
Sbjct:   50 SSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMN-------AEEGVPFTAIR-EASLLKGLKHANIVLLHDIIHTKETLTF--VFEYMHTDLAQYMSQHPGGLHPHNVRLFMFQLLRGLAYIHHQHVLHRDLKPQNLLISHLGELKLADFGLA 195          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: CDC7_SCHPO (Cell division control protein 7 OS=Schizosaccharomyces pombe GN=cdc7 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 46/148 (31.08%), Postives = 76/148 (51.35%), Query Frame = 2
Query:  245 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            +G G++G V    +  +G+  A+K   K  LSK+     ++ ++ ++ E+ ++K L HPNIV          +D   ++LEY E           G I E++   Y   ++ GL+YLH   V+H DIK  N+L    GT+K+ DF V+
Sbjct:   15 LGKGAFGAVYRGLNIKNGETVAVK---KVKLSKML----KSDLSVIKMEIDLLKNLDHPNIVKYRGSYQ--TNDSLCIILEYCENGSLRSICKNFGKIPENLVALYTFQVLQGLLYLHNQGVIHRDIKGANILTTKDGTIKLADFGVA 153          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYBB (Cell division control protein 2 homolog 1 OS=Trypanosoma brucei brucei GN=CRK1 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 49/157 (31.21%), Postives = 79/157 (50.32%), Query Frame = 2
Query:  215 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSV 685
            M + Y  ++KIG GSYG V   R    G   A+K   +  L K       TA+    RE+ I+K L+H NIV L++V    +     +V E +E           G +     ++++R ++SG+ + H  NV+H D+KP NLL++    +K+ DF +
Sbjct:    1 MGSRYERLQKIGEGSYGVVFRARDVTTGTIVAVK---RIRLEKEEEGVPCTAI----REISILKELRHENIVRLLDVCH--SEKRLTLVFECMEMDLKKYMDHVGGDLDAGTIQEFMRSLLSGVRFCHERNVLHRDLKPPNLLISREKELKLADFGL 148          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: BCK1_YEAST (Serine/threonine-protein kinase BCK1/SLK1/SSP31 OS=Saccharomyces cerevisiae GN=BCK1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 52/182 (28.57%), Postives = 84/182 (46.15%), Query Frame = 2
Query:  152 RQFPVKESNKLIRSEDENGTKMINEYVHVR--KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFY-MVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            R   V E++ +  ++ +N      E+  ++   IG GS+G V L  +   G+  A+K       S    A   T    +R EV  +K L H   +N+++ +   N ++ Y + LEYV G          G   E + +     ++ GL YLH   ++H D+K DNLL+   G  KI DF +S
Sbjct: 1148 RMVEVTENHMVSINKAKNSKGEYKEFAWMKGEMIGKGSFGAVYLCLNVTTGEMMAVKQVEVPKYSSQNEAILSTVEA-LRSEVSTLKDLDH---LNIVQYLGFENKNNIYSLFLEYVAGGSVGSLIRMYGRFDEPLIKHLTTQVLKGLAYLHSKGILHRDMKADNLLLDQDGICKISDFGIS 1325          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: AURKB_MOUSE (Serine/threonine-protein kinase 12 OS=Mus musculus GN=Aurkb PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 47/150 (31.33%), Postives = 65/150 (43.33%), Query Frame = 2
Query:  239 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            R +G G +G V L R        A+K   KS + K      E     +RRE+ I   L+HPNI+ L     D      Y++LEY           +     E      + ++   L Y H   V+H DIKP+NLL+   G +KI DF  S
Sbjct:   86 RPLGKGKFGNVYLAREKKSRFIVALKILFKSQIEK------EGVEHQLRREIEIQAHLKHPNILQLYNYFYD--QQRIYLILEYAPRGELYKELQKSRTFDEQRTATIMEELSDALTYCHKKKVIHRDIKPENLLLGLQGELKIADFGWS 227          
The following BLAST results are available for this feature:
BLAST of FC929906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCLK2_HUMAN4.329e-1228.96Serine/threonine-protein kinase DCLK2 OS=Homo sapi... [more]
CRK1_LEIME4.329e-1228.93Cell division protein kinase 2 homolog CRK1 OS=Lei... [more]
CDKL1_RAT4.329e-1228.57Cyclin-dependent kinase-like 1 OS=Rattus norvegicu... [more]
CDK16_RAT4.329e-1229.52Cell division protein kinase 16 OS=Rattus norvegic... [more]
CDK16_MOUSE4.329e-1229.52Cell division protein kinase 16 OS=Mus musculus GN... [more]
CDK15_HUMAN4.329e-1229.49Cell division protein kinase 15 OS=Homo sapiens GN... [more]
CDC7_SCHPO4.329e-1231.08Cell division control protein 7 OS=Schizosaccharom... [more]
CC2H1_TRYBB4.329e-1231.21Cell division control protein 2 homolog 1 OS=Trypa... [more]
BCK1_YEAST4.329e-1228.57Serine/threonine-protein kinase BCK1/SLK1/SSP31 OS... [more]
AURKB_MOUSE4.329e-1231.33Serine/threonine-protein kinase 12 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionC34001G01EF PostHarvC1 Citrus clementina cDNA clone C34001G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929906 ID=FC929906; Name=FC929906; organism=Citrus clementina; type=EST; length=690bp
GTTAGGAGATGATATAGATGATGATGATGATGATAATTCATACAACGGCG
AGGCTACTAATACAGCAGATGGAGATGGTGGTGAGATGCAGAACCATGCC
AAACGATCTGAAGAGATTTTTAGGGAAAGAGAACTGAATGGACTGATTTG
CAGGCAATTTCCAGTTAAGGAATCTAATAAACTCATTCGATCAGAGGATG
AAAATGGGACTAAGATGATCAATGAGTATGTACATGTACGTAAGATTGGT
GCCGGTAGCTATGGGAAAGTGGTCCTTTATCGAAGCTCCTTAGATGGAAA
GCATTATGCAATTAAGGCTTTTCATAAGTCTCATTTGTCAAAGCTGCGAG
TTGCCCCTTCAGAGACGGCTATGACTGATGTTCGTCGTGAGGTTCTAATC
ATGAAAATGTTGCAACATCCAAATATAGTTAATCTGATTGAGGTGATTGA
TGACCCAAACTCAGATCACTTCTACATGGTTCTTGAATATGTGGAAGGAA
AATGGGACAATGATGGGTTTGGTCAACCAGGGGCCATTGGAGAGAGTATG
GCTAGAAAGTATTTGCGGGACATAGTATCTGGGTTGATGTACCTGCATGG
ACATAATGTAGTGCATGGAGACATAAAACCCGATAATCTGTTAGTTGCGC
CGAGTGGTACAGTGAAGATTGGAGATTTTAGTGTCAGCCA
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