FC929906

Overview
NameFC929906
Unique NameFC929906
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: KIN1_SCHPO (Protein kinase kin1 OS=Schizosaccharomyces pombe GN=kin1 PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 2.144e-19
Identity = 61/171 (35.67%), Postives = 92/171 (53.80%), Query Frame = 2
Query:  212 KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSH--LSKLRVAPSETAMTDVR----------REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            K+I  YV  + IGAGS GKV +      G+ +AIK   + H  ++K + A S  A    +          RE  +  +L+HP I    +V     + H+YMV E+V+G    D     G + E  ARK++R I S L YLH ++VVH D+K +N+L++ +G +KI DF +S
Sbjct:  120 KVIGNYVLGKTIGAGSMGKVKVAHHLKTGEQFAIKIVTRLHPDITKAKAAASAEATKAAQSEKNKEIRTVREAALSTLLRHPYICEARDVYI--TNSHYYMVFEFVDGGQMLDYIISHGKLKEKQARKFVRQIGSALSYLHQNSVVHRDLKIENILISKTGDIKIIDFGLS 288          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: PAR1_CAEEL (Serine/threonine-protein kinase par-1 OS=Caenorhabditis elegans GN=par-1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.800e-19
Identity = 57/157 (36.31%), Postives = 84/157 (53.50%), Query Frame = 2
Query:  218 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            + +Y  ++ IG G++ KV L +  + G   AIK   K+ L+        +++  + REV IMK L HPNIV L +V++   +   Y+VLEY  G    D     G + E  AR   R IVS + YLH  N++H D+K +NLL+     +KI DF  S
Sbjct:  167 VGKYKLLKTIGKGNFAKVKLAKHVITGHEVAIKIIDKTALNP-------SSLQKLFREVKIMKQLDHPNIVKLYQVMETEQT--LYLVLEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYLHSKNIIHRDLKAENLLLDQDMNIKIADFGFS 314          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: PAR1_CAEBR (Serine/threonine-protein kinase par-1 OS=Caenorhabditis briggsae GN=par-1 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.800e-19
Identity = 57/157 (36.31%), Postives = 84/157 (53.50%), Query Frame = 2
Query:  218 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            + +Y  ++ IG G++ KV L +  + G   AIK   K+ L+        +++  + REV IMK L HPNIV L +V++   +   Y+VLEY  G    D     G + E  AR   R IVS + YLH  N++H D+K +NLL+     +KI DF  S
Sbjct:  125 VGKYKLLKTIGKGNFAKVKLAKHVITGHEVAIKIIDKTALNP-------SSLQKLFREVKIMKQLDHPNIVKLYQVMETEQT--LYLVLEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYLHSKNIIHRDLKAENLLLDQDMNIKIADFGFS 272          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: MRKC_DICDI (Probable serine/threonine-protein kinase MARK-C OS=Dictyostelium discoideum GN=mrkC PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.800e-19
Identity = 59/170 (34.71%), Postives = 93/170 (54.71%), Query Frame = 2
Query:  182 LIRSEDENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHF-YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            +I  + +N    +  Y   + +G G++GKV L  +    ++ AIK    + LS  +    ET      RE+ IMK+L HPNIV L++V+D    +   Y+++EYV G    D       I E  ARK+ R ++S + Y H + +VH D+KP+NLL+  +G +KI DF +S
Sbjct:   31 IIPKKKKNRIMHVGSYEVGKTLGNGTFGKVKLGTNICTKENVAIKFIKNNKLSGKQ---KETCF----REIDIMKLLDHPNIVKLLDVVDKREEEGTTYLIVEYVSGGELFDYIVAREYIKEKEARKFFRQMISAIEYCHANLIVHRDLKPENLLLDSNGDIKISDFGLS 193          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: CIPKS_ORYSJ (CBL-interacting protein kinase 28 OS=Oryza sativa subsp. japonica GN=CIPK28 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.800e-19
Identity = 52/163 (31.90%), Postives = 89/163 (54.60%), Query Frame = 2
Query:  200 ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            E  + ++  YV  R++G G++GKV   R+   G+  AIK   K  + K+ +      M  ++RE+ IM++++HPN++ L EV+      + Y  LEY +G        +   + E  AR Y + ++S + Y H   V H D+KP+NLL+  + T+K+ DF +S
Sbjct:    2 EERSVLMERYVIGRQLGQGTFGKVYYARNLSSGQSVAIKMIDKEKILKVGL------MEQIKREISIMRLVRHPNVLQLFEVM--ATKSNIYFALEYAKGGELFHKMAR-AKLNEESARNYFQQLISAMDYCHSRGVYHRDLKPENLLLDENETLKVSDFGLS 155          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: CIPKL_ORYSJ (CBL-interacting protein kinase 21 OS=Oryza sativa subsp. japonica GN=CIPK21 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.800e-19
Identity = 52/157 (33.12%), Postives = 82/157 (52.23%), Query Frame = 2
Query:  218 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            + +Y   R +G G +GKV L R +  G  +AIK   +  +  +++         ++RE+  +K+L+HPN+V L EV    +    YMVLEYV G    D     G + E   RK  + ++  + Y H   V H D+KP+N+LV   G +K+ DF +S
Sbjct:   84 MGKYEMGRALGEGHFGKVKLARHADTGAAFAIKILDRQRILAMKIDEQ------IKREIATLKLLKHPNVVRLHEV--SASKTKIYMVLEYVNGGELFDKIALKGKLSEKEGRKLFQQLMDAVSYCHEKGVYHRDLKPENVLVDAKGNIKVSDFGLS 232          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: CIPK9_ARATH (CBL-interacting serine/threonine-protein kinase 9 OS=Arabidopsis thaliana GN=CIPK9 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.800e-19
Identity = 49/157 (31.21%), Postives = 88/157 (56.05%), Query Frame = 2
Query:  218 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            +  Y   R +G GS+ KV   ++++ G   AIK   +  + + ++      +  ++RE+  MK+++HPN+V +IEV+   +    Y+VLE V G    D   Q G + E  AR+Y + +++ + Y H   V H D+KP+NL++  +G +K+ DF +S
Sbjct:   16 VGNYEMGRTLGEGSFAKVKYAKNTVTGDQAAIKILDREKVFRHKM------VEQLKREISTMKLIKHPNVVEIIEVM--ASKTKIYIVLELVNGGELFDKIAQQGRLKEDEARRYFQQLINAVDYCHSRGVYHRDLKPENLILDANGVLKVSDFGLS 164          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: CIPK8_ORYSJ (CBL-interacting protein kinase 8 OS=Oryza sativa subsp. japonica GN=CIPK8 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.800e-19
Identity = 50/159 (31.45%), Postives = 92/159 (57.86%), Query Frame = 2
Query:  212 KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            + + +Y   R IG G++ KV   +++  G+  A+K   +S + K ++A        ++RE+ IMK+++HPN+V L EV+   +    +++LE++ G    D   + G + E+ AR+Y + ++ G+ + H   V H D+KP+NLL+   G +KI DF +S
Sbjct:    8 RRVGKYEVGRTIGEGTFAKVKFAQNTESGESVAMKVVDRSSILKHKMADQ------IKREISIMKLVRHPNVVRLHEVL--ASRKKIFIILEFITGGELFDKIIRHGRLNEADARRYFQQLIDGVDFCHSKGVYHRDLKPENLLLDSQGNLKISDFGLS 158          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: SMKY_MOUSE (Sperm motility kinase Y OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.657e-19
Identity = 56/166 (33.73%), Postives = 91/166 (54.82%), Query Frame = 2
Query:  191 SEDENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            S  E+G ++ ++Y  VR +G G+Y KV+L +  L G   A+K   K+          +       +E  IMK ++HPNIV+L++V +       Y+++E VEG+   +     G I E  AR+    I+S + Y HG  +VH D+KPDN+++   G++KI DF +S
Sbjct:   17 SNPEDG-ELYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLKN----------KPCFQPAMKEANIMKKIKHPNIVSLLQVFETKTRG--YLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAVSYCHGLGIVHRDLKPDNIMIDDKGSIKIIDFGLS 169          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: CIPKX_ORYSJ (CBL-interacting protein kinase 33 OS=Oryza sativa subsp. japonica GN=CIPK33 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.657e-19
Identity = 52/159 (32.70%), Postives = 87/159 (54.72%), Query Frame = 2
Query:  212 KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            + + +Y   R IG G++ KV   R +  G   AIK   K  + K ++      +  ++RE+  MK+++HPN+V + EV+   +  + Y+VLEYV G    D     G + E  AR+Y + +++ + Y H   V H D+KP+NLL+   G +K+ DF +S
Sbjct:    8 RRVGKYELGRTIGEGTFAKVKFARDTETGDPVAIKILDKEKVLKHKM------VEQIKREISTMKLIKHPNVVRIYEVMG--SKTNIYIVLEYVTGGELFDTIVNHGRMREDEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDSYGNLKVSDFGLS 158          
The following BLAST results are available for this feature:
BLAST of FC929906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KIN1_SCHPO2.144e-1935.67Protein kinase kin1 OS=Schizosaccharomyces pombe G... [more]
PAR1_CAEEL2.800e-1936.31Serine/threonine-protein kinase par-1 OS=Caenorhab... [more]
PAR1_CAEBR2.800e-1936.31Serine/threonine-protein kinase par-1 OS=Caenorhab... [more]
MRKC_DICDI2.800e-1934.71Probable serine/threonine-protein kinase MARK-C OS... [more]
CIPKS_ORYSJ2.800e-1931.90CBL-interacting protein kinase 28 OS=Oryza sativa ... [more]
CIPKL_ORYSJ2.800e-1933.12CBL-interacting protein kinase 21 OS=Oryza sativa ... [more]
CIPK9_ARATH2.800e-1931.21CBL-interacting serine/threonine-protein kinase 9 ... [more]
CIPK8_ORYSJ2.800e-1931.45CBL-interacting protein kinase 8 OS=Oryza sativa s... [more]
SMKY_MOUSE3.657e-1933.73Sperm motility kinase Y OS=Mus musculus PE=2 SV=1[more]
CIPKX_ORYSJ3.657e-1932.70CBL-interacting protein kinase 33 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionC34001G01EF PostHarvC1 Citrus clementina cDNA clone C34001G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929906 ID=FC929906; Name=FC929906; organism=Citrus clementina; type=EST; length=690bp
GTTAGGAGATGATATAGATGATGATGATGATGATAATTCATACAACGGCG
AGGCTACTAATACAGCAGATGGAGATGGTGGTGAGATGCAGAACCATGCC
AAACGATCTGAAGAGATTTTTAGGGAAAGAGAACTGAATGGACTGATTTG
CAGGCAATTTCCAGTTAAGGAATCTAATAAACTCATTCGATCAGAGGATG
AAAATGGGACTAAGATGATCAATGAGTATGTACATGTACGTAAGATTGGT
GCCGGTAGCTATGGGAAAGTGGTCCTTTATCGAAGCTCCTTAGATGGAAA
GCATTATGCAATTAAGGCTTTTCATAAGTCTCATTTGTCAAAGCTGCGAG
TTGCCCCTTCAGAGACGGCTATGACTGATGTTCGTCGTGAGGTTCTAATC
ATGAAAATGTTGCAACATCCAAATATAGTTAATCTGATTGAGGTGATTGA
TGACCCAAACTCAGATCACTTCTACATGGTTCTTGAATATGTGGAAGGAA
AATGGGACAATGATGGGTTTGGTCAACCAGGGGCCATTGGAGAGAGTATG
GCTAGAAAGTATTTGCGGGACATAGTATCTGGGTTGATGTACCTGCATGG
ACATAATGTAGTGCATGGAGACATAAAACCCGATAATCTGTTAGTTGCGC
CGAGTGGTACAGTGAAGATTGGAGATTTTAGTGTCAGCCA
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