FC929906

Overview
NameFC929906
Unique NameFC929906
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: CIPKP_ARATH (CBL-interacting serine/threonine-protein kinase 25 OS=Arabidopsis thaliana GN=CIPK25 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.657e-19
Identity = 55/175 (31.43%), Postives = 94/175 (53.71%), Query Frame = 2
Query:  170 ESNKLIRSEDENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQ--PGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            +S   +  E +    +  +Y   R +G G++GKV   +    G+  AIK  +K  + +      E  M  ++RE+ IM++++HPNIV L EV+        + ++EYV+G    + F +   G + E  ARKY + ++S + + H   V H D+KP+NLLV  +G +K+ DF +S
Sbjct:   24 QSAPTMEEEQQQLRVLFAKYEMGRLLGKGTFGKVYYGKEITTGESVAIKIINKDQVKR------EGMMEQIKREISIMRLVRHPNIVELKEVM--ATKTKIFFIMEYVKG---GELFSKIVKGKLKEDSARKYFQQLISAVDFCHSRGVSHRDLKPENLLVDENGDLKVSDFGLS 187          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: CDS1_SCHPO (Serine/threonine-protein kinase cds1 OS=Schizosaccharomyces pombe GN=cds1 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 3.657e-19
Identity = 63/180 (35.00%), Postives = 96/180 (53.33%), Query Frame = 2
Query:  155 QFPVKESNKLIRSEDENGTKMINE-YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDV-RREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            Q PVK S    R   +N  K  N  Y  +R +G+G++  V L      GK YAIK  +K    K+ +  SE   T++ +RE+ I+K L HP +V   E+ +  N D  ++V+EYVEG    D     G+I E   +  L+ ++  L++LH   V H DIKP+N+L+     +KI DF ++
Sbjct:  146 QVPVKHS----RDSQKNMIKSENSHYEIIRTLGSGTFAVVKLAVEVNSGKWYAIKIINKR---KILLTSSEKRATEMFQREIDILKSLHHPGVVQCHEIFE--NDDELFIVMEYVEGGDLMDFLIANGSIDEQDCKPLLKQLLETLLHLHKQGVTHRDIKPENILITNDFHLKISDFGLA 316          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: AMPKA_DICDI (5'-AMP-activated serine/threonine-protein kinase catalytic subunit alpha OS=Dictyostelium discoideum GN=snfA PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.657e-19
Identity = 56/164 (34.15%), Postives = 93/164 (56.71%), Query Frame = 2
Query:  200 ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAP-SGTVKIGDFSVS 688
            E  +++I  Y   + +G GS+GKV L      G   AIK  +++ +  L++         +RRE+  MK+ +HP+I+ L EVI+   +   +MV+EYV G    +   + G + E  +R+  + ++SG+ Y H H VVH D+KP+NLL+ P +  +KI DF +S
Sbjct:   22 EKSSQIIGNYRLDKTLGIGSFGKVKLAEHIRTGVKVAIKILNRTKIKNLKMDEK------IRREIQNMKLFRHPHIIKLYEVIE--TTTDIFMVMEYVTGGELFEYIVKNGKLLEDESRRLFQQMISGVDYCHHHMVVHRDLKPENLLLDPINKCIKIADFGLS 177          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: CIPKB_ORYSJ (CBL-interacting protein kinase 11 OS=Oryza sativa subsp. japonica GN=CIPK11 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.776e-19
Identity = 48/158 (30.38%), Postives = 88/158 (55.70%), Query Frame = 2
Query:  215 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            ++  Y   +++G G++ KV   R+   G+  AIK  +K  + K+ +      M  ++RE+ IM++++HPN++ L EV+   +    Y VLEY +G    +   + G + E  AR+Y   +++ + Y H   V H D+KP+NLL+  +  +K+ DF +S
Sbjct:    8 LMGRYEVGKQLGQGTFAKVYYARNLTTGQAVAIKMINKDKVMKVGL------MEQIKREISIMRLVKHPNVLQLFEVM--ASKSKIYFVLEYAKGGELFNKIAKEGKLSEDSARRYFHQLINAVDYCHSRGVYHRDLKPENLLLDENENLKVSDFGLS 157          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: NEK1_MOUSE (Serine/threonine-protein kinase Nek1 OS=Mus musculus GN=Nek1 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 6.237e-19
Identity = 56/162 (34.57%), Postives = 89/162 (54.94%), Query Frame = 2
Query:  218 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF----GQPGAI-GESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            + +YV ++KIG GS+GK VL +S+ DG+HY IK  + S +       S+    + RREV ++  ++HPNIV   E  ++  S   Y+V++Y EG    D F     Q GA+  E     +   I   L ++H   ++H DIK  N+ +   GTV++GDF ++
Sbjct:    1 MEKYVRLQKIGEGSFGKAVLVKSTEDGRHYVIKEINISRM-------SDKERQESRREVAVLANMKHPNIVQYKESFEENGS--LYIVMDYCEG---GDLFKRINAQKGALFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIA 150          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: CIPKW_ORYSJ (CBL-interacting protein kinase 32 OS=Oryza sativa subsp. japonica GN=CIPK32 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 6.237e-19
Identity = 52/159 (32.70%), Postives = 85/159 (53.46%), Query Frame = 2
Query:  212 KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            + + +Y   R IG G++ KV   R +  G   AIK   K  + K ++      +  ++RE+  MK+++HPN+V + EV+        Y+VLEYV G    D     G + E  AR+Y + +++ + Y H   V H D+KP+NLL+   G +K+ DF +S
Sbjct:    8 RRVGKYELGRTIGEGTFAKVKFARDTETGDPVAIKILDKEKVLKHKM------VEQIKREISTMKLIKHPNVVRIYEVMGSKTK--IYIVLEYVTGGELFDTIVNHGRMREDEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDSYGNLKVSDFGLS 158          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: SMK2B_MOUSE (Sperm motility kinase 2B OS=Mus musculus GN=Smok2b PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.146e-19
Identity = 54/154 (35.06%), Postives = 78/154 (50.65%), Query Frame = 2
Query:  224 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSV 685
            +YV +  IG G   KV+L R  L G H A+K   KS          E     V  EV ++ M  HPNI++L++VI+       Y+++E  EGK         G + E  AR   + ++S + Y H   +VH D+KPDN++V   G VKI DF +
Sbjct:    7 QYVMLETIGHGGCSKVMLARHRLTGSHVAVKMIRKS----------ECWCNPVMSEVELLMMADHPNIISLLQVIETKKK--VYLIMELCEGKSLYQHIRNAGYLQEDEARALFKQLLSAMNYCHNQGIVHRDLKPDNIMVEKDGKVKIIDFGL 148          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: CIPKL_ARATH (CBL-interacting serine/threonine-protein kinase 21 OS=Arabidopsis thaliana GN=CIPK21 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.146e-19
Identity = 57/161 (35.40%), Postives = 86/161 (53.42%), Query Frame = 2
Query:  206 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            GTK I +Y   R IG G++ KV L   + +G + A+K   K+      +   +   + V+RE+  MK+L HPNIV + EVI         +V+EYV G   +D  G+   + ES ARK  + ++  + Y H   V H D+KP NLL+   G +K+ DF +S
Sbjct:    5 GTKKIGKYEIGRTIGEGNFAKVKLGYDTTNGTYVAVKIIDKA------LVIQKGLESQVKREIRTMKLLNHPNIVQIHEVIGTKTK--ICIVMEYVSGGQLSDRLGRQ-KMKESDARKLFQQLIDAVDYCHNRGVYHRDLKPQNLLLDSKGNLKVSDFGLS 156          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: CIPKB_ARATH (CBL-interacting serine/threonine-protein kinase 11 OS=Arabidopsis thaliana GN=CIPK11 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.146e-19
Identity = 48/163 (29.45%), Postives = 88/163 (53.99%), Query Frame = 2
Query:  200 ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            +N   +  +Y   + +G G++ KV   R    G+  A+K      L+K ++  +     +++RE+ IM+ L HPNIV L EV+        +  +E+V+G    +   + G + E ++R+Y + ++S + Y H   V H D+KP+NLL+  +G +K+ DF +S
Sbjct:   12 DNNDALFGKYELGKLLGCGAFAKVFHARDRRTGQSVAVKI-----LNKKKLLTNPALANNIKREISIMRRLSHPNIVKLHEVM--ATKSKIFFAMEFVKGGELFNKISKHGRLSEDLSRRYFQQLISAVGYCHARGVYHRDLKPENLLIDENGNLKVSDFGLS 167          
BLAST of FC929906 vs. ExPASy Swiss-Prot
Match: AIR2_CAEEL (Aurora/Ipl1-related protein kinase 2 OS=Caenorhabditis elegans GN=air-2 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.064e-18
Identity = 62/176 (35.23%), Postives = 81/176 (46.02%), Query Frame = 2
Query:  161 PVKESNKLIRSEDENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGHNVVHGDIKPDNLLVAPSGTVKIGDFSVS 688
            P KE+   + +  + G   IN++   R +G G +G V L R+     H AIK   KS L       S      + RE+ I   L HPNI+ L     D      Y+VLEY  G              E  A KY+ +I   L Y H  NV+H DIKP+NLL+   G +KIGDF  S
Sbjct:   11 PEKET---VNTPQKGGKFTINDFEIGRPLGKGKFGSVYLARTKTGHFHVAIKVLFKSQLI------SGGVEHQLEREIEIQSHLNHPNIIKLYTYFWDAKK--IYLVLEYAPGGEMYKQLTVSKRFSEPTAAKYMYEIADALSYCHRKNVIHRDIKPENLLIGSQGELKIGDFGWS 175          
The following BLAST results are available for this feature:
BLAST of FC929906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CIPKP_ARATH3.657e-1931.43CBL-interacting serine/threonine-protein kinase 25... [more]
CDS1_SCHPO3.657e-1935.00Serine/threonine-protein kinase cds1 OS=Schizosacc... [more]
AMPKA_DICDI3.657e-1934.155'-AMP-activated serine/threonine-protein kinase c... [more]
CIPKB_ORYSJ4.776e-1930.38CBL-interacting protein kinase 11 OS=Oryza sativa ... [more]
NEK1_MOUSE6.237e-1934.57Serine/threonine-protein kinase Nek1 OS=Mus muscul... [more]
CIPKW_ORYSJ6.237e-1932.70CBL-interacting protein kinase 32 OS=Oryza sativa ... [more]
SMK2B_MOUSE8.146e-1935.06Sperm motility kinase 2B OS=Mus musculus GN=Smok2b... [more]
CIPKL_ARATH8.146e-1935.40CBL-interacting serine/threonine-protein kinase 21... [more]
CIPKB_ARATH8.146e-1929.45CBL-interacting serine/threonine-protein kinase 11... [more]
AIR2_CAEEL1.064e-1835.23Aurora/Ipl1-related protein kinase 2 OS=Caenorhabd... [more]

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Properties
Property NameValue
Genbank descriptionC34001G01EF PostHarvC1 Citrus clementina cDNA clone C34001G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929906 ID=FC929906; Name=FC929906; organism=Citrus clementina; type=EST; length=690bp
GTTAGGAGATGATATAGATGATGATGATGATGATAATTCATACAACGGCG
AGGCTACTAATACAGCAGATGGAGATGGTGGTGAGATGCAGAACCATGCC
AAACGATCTGAAGAGATTTTTAGGGAAAGAGAACTGAATGGACTGATTTG
CAGGCAATTTCCAGTTAAGGAATCTAATAAACTCATTCGATCAGAGGATG
AAAATGGGACTAAGATGATCAATGAGTATGTACATGTACGTAAGATTGGT
GCCGGTAGCTATGGGAAAGTGGTCCTTTATCGAAGCTCCTTAGATGGAAA
GCATTATGCAATTAAGGCTTTTCATAAGTCTCATTTGTCAAAGCTGCGAG
TTGCCCCTTCAGAGACGGCTATGACTGATGTTCGTCGTGAGGTTCTAATC
ATGAAAATGTTGCAACATCCAAATATAGTTAATCTGATTGAGGTGATTGA
TGACCCAAACTCAGATCACTTCTACATGGTTCTTGAATATGTGGAAGGAA
AATGGGACAATGATGGGTTTGGTCAACCAGGGGCCATTGGAGAGAGTATG
GCTAGAAAGTATTTGCGGGACATAGTATCTGGGTTGATGTACCTGCATGG
ACATAATGTAGTGCATGGAGACATAAAACCCGATAATCTGTTAGTTGCGC
CGAGTGGTACAGTGAAGATTGGAGATTTTAGTGTCAGCCA
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