FC929909
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929909 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.888e-28 Identity = 76/243 (31.28%), Postives = 111/243 (45.68%), Query Frame = 1 Query: 4 CNQVVCRECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP---NYPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 717 C CR G+ G G + +++ F + + + C + FYT AF+ A K +P F + G++ KREIAAFFA HET +C+ E+ S+ YCDP +PC KYYGRGP+Q+SWNYNY +P +A D V++FK+A+WFWM S H V+ G+G TT + +ECG + R+G++ Sbjct: 48 CQSGPCRSGRGGGGSGGGGANVASVVTSSFFNGI-KNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHET-------------GHFCYISEIN-KSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNY--GPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMN------SVHGVVPQ---------------GFGATTRAMQRALECGGNNPAQMNARVGYY 252
BLAST of FC929909 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 7.888e-28 Identity = 82/243 (33.74%), Postives = 116/243 (47.74%), Query Frame = 1 Query: 4 CNQVVCRECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 717 C CR G GG +G I+++ F ++ C + FYT D+FI AA FP F NS + +REIA FA HET +C+ E+ AS DYCD N YPC GK Y+GRGPIQLSWNYNY C P+L++++P ++F++ +WFWM + P ++++ G+G T IN G+EC + AV RI ++ Sbjct: 52 CRSGPCRSPGGTPSPPG-GGSVGSIVTQAFFNGIINQAGGG-CAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHETGH-------------FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGAC--GQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP-------VLNQ--------------GFGATIRAIN-GMECNGGNSGAVNARIRYY 251
BLAST of FC929909 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.345e-27 Identity = 73/228 (32.02%), Postives = 107/228 (46.93%), Query Frame = 1 Query: 49 AGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCR--GKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 717 AG G + +++ F + + + C + FYT +F+ AA+++ F N KREIAAFFA HET C+ E+ A+ DYCD + +PC+ KYYGRGP+Q+SWN+NY +PD +A DP +SFK+A+WFWM N+V+ G+G T ING +EC AV R+ ++ Sbjct: 78 AGAGVSVESVVTEAFFNGI-KNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNY--GPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM---------------------NNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYY 268
BLAST of FC929909 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.328e-26 Identity = 77/249 (30.92%), Postives = 111/249 (44.58%), Query Frame = 1 Query: 4 CNQVVCRECDPDDGTAGDGG------ELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 717 C CR G G GG + +++ F + + + C + FYT AF+ A A+P F + G E KREIAAFFA HET +C+ E+ S+ YCD + +PC KYYGRGP+Q+SWNYNY +P+ +A D V++FK+A+WFWM N+V+ G+G T ING +EC + R+G++ Sbjct: 53 CQSGPCRSGGGGGGGGGGGGGGSGGANVANVVTDAFFNGI-KNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHET-------------GHFCYISEIN-KSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNY--GPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM---------------------NNVHGVMPQGFGATIRAINGALECNGNNPAQMNARVGYY 263
BLAST of FC929909 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.785e-25 Identity = 70/205 (34.15%), Postives = 96/205 (46.83%), Query Frame = 1 Query: 121 DKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCD----PNYPCRGK--YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 717 D C + FYT DAF+ A ++ FG G+E KREIAA FA HET +C+ E+ AS DYCD YPC Y+GRGPIQLSWN+NY P+ ++ D V+SFK+A+W+WM Q +P ++ G+G T ING +EC V+ R+ ++ Sbjct: 85 DSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHET-------------GHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNY--GPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM--QHVRPVINQ-------------------GFGATIRAINGALECDGANPTTVQARVNYY 253
BLAST of FC929909 vs. ExPASy Swiss-Prot
Match: CHI4_ARAHY (Endochitinase 4 (Fragment) OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.765e-11 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 1 Query: 535 MTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIEC 672 MT Q KPSCH+VI + W+P+A D AGR PGYG+ TNIINGG++C Sbjct: 1 MTPQGNKPSCHDVITNAWRPTATDSAAGRAPGYGVITNIINGGLDC 46 The following BLAST results are available for this feature:
BLAST of FC929909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929909 ID=FC929909; Name=FC929909; organism=Citrus clementina; type=EST; length=717bpback to top |