FC929912

Overview
NameFC929912
Unique NameFC929912
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15282 contig Ccv1_Contig15282:456..1152. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: ASP2_BLAGE (Aspartic protease Bla g 2 OS=Blattella germanica PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.381e-13
Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = 1 
Query:  205 EIAVGDAVP----------VWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 543
            ++ VG A P          V +N VE+ L++  VFS    R  D E  GEI+FGG D K+  G+ TYVP+     W+F L  + IG+  T V   G  AI+D+  +++ GP   V  IN AIG
Sbjct:  141 DVVVGIAAPGCPNALKGKTVLENFVEENLIAP-VFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGD--TTVAPAGTQAIIDTSKAIIVGPKAYVNPINEAIG 260
The following BLAST results are available for this feature:
BLAST of FC929912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
ASP2_BLAGE1.381e-1338.21Aspartic protease Bla g 2 OS=Blattella germanica P... [more]

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Properties
Property NameValue
Genbank descriptionC34001G07EF PostHarvC1 Citrus clementina cDNA clone C34001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929912 ID=FC929912; Name=FC929912; organism=Citrus clementina; type=EST; length=697bp
AGAAAATCCAATACATATACCGAAATTGGAAAATCCTGTGAAATAAACTA
TGGATCTGGATCAATTTCTGGCTTCTTCAGTCAAGACAATGTTGAAGTTG
GGGATGTTGTTGTCAAGGATCAGGTTTTCATTGAGGCTACACGAGAAGGG
AGTCTCACTTTTCTATTGGCAAGGTTTGATGGAATAATAGGGCTTGGGTT
CCGGGAAATTGCAGTTGGGGATGCTGTGCCTGTGTGGGACAATATGGTTG
AGCAGGGCCTTGTAAGCGAGGAGGTCTTCTCATTCTGGCTCAACAGGGAT
CCAGACGCTGAAGAGGGTGGAGAGATTGTTTTTGGCGGTGTTGATCCAAA
GCACTTTAAAGGGAAGCATACCTATGTTCCTGTTACTAAAAAAGGCTACT
GGCAGTTCAATTTGGGAGATATATTAATTGGGAATCAGTCCACAGGTGTT
TGTGAGGGTGGTTGTGCTGCCATTGTGGACTCAGGAACATCCTTACTAGC
CGGTCCAACACCTGTTGTGACTGAAATCAATCATGCCATTGGTGGTGAAG
GAGTTGTTAGTGCGGAGTGTAAGCTAGTTGTTTCCCAGTATGGGGATTTA
ATATGGGATCTCTTAGTATCAGGGCTACTACCTGAGAAAGTATGTCAGCA
GATTGGTTTATGTGCTTTCAATGGCGCTGAATATGTGAGTACTGGGA
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