FC929912

Overview
NameFC929912
Unique NameFC929912
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: CATE_RAT (Cathepsin E OS=Rattus norvegicus GN=Ctse PE=1 SV=3)

HSP 1 Score: 159.458 bits (402), Expect = 1.620e-38
Identity = 79/192 (41.15%), Postives = 112/192 (58.33%), Query Frame = 1
Query:    4 KSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGG---EGVVSAEC 570
            +S+TY E+G    I YG+GS++G                  F E+ +E   TF+ A FDGI+GLG+  +AVG   PV+DNM+ Q LV+  +FS +L+ DP    G E+ FGG DP HF G   ++PVTK+GYWQ  L  I +G+ +   C  GC AIVD+GTSL+ GP   + ++  AIG    +G  + +C
Sbjct:  126 QSSTYMEVGNHFSIQYGTGSLTGIIGADQVSVEGLTVEGQQFGESVKEPGQTFVNAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVALPMFSVYLSSDPQGGSGSELTFGGYDPSHFSGSLNWIPVTKQGYWQIALDGIQVGD-TVMFCSEGCQAIVDTGTSLITGPPKKIKQLQEAIGATPMDGEYAVDC 316          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: CATE_RABIT (Cathepsin E OS=Oryctolagus cuniculus GN=CTSE PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.763e-38
Identity = 80/193 (41.45%), Postives = 114/193 (59.07%), Query Frame = 1
Query:    4 KSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGG---EGVVSAECK 573
            +SNTY+E+G    I YG+GS++G                  F E+ +E   TF+ A FDGI+GLG+  +A G   PV+DNM+ Q LVS  +FS +++ +P+   G E+ FGG D  HF G   +VPVTK+GYWQ  L +I +G  S   C  GC AIVD+GTSL+ GP+  + ++  AIG    +G  + EC+
Sbjct:  124 QSNTYSEVGTPFSIAYGTGSLTGIIGADQVSVQGLTVVGQQFGESVKEPGQTFVNAEFDGILGLGYPSLAAGGVTPVFDNMMAQNLVSLPMFSVYMSSNPEGGSGSELTFGGYDSSHFSGSLNWVPVTKQGYWQIALDEIQVGG-SPMFCPEGCQAIVDTGTSLITGPSDKIIQLQAAIGATPMDGEYAVECE 315          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: NAPSA_MOUSE (Napsin-A OS=Mus musculus GN=Napsa PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.038e-38
Identity = 80/182 (43.96%), Postives = 109/182 (59.89%), Query Frame = 1
Query:    1 RKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGG 546
            + S+++   G    I YG+G +SG  SQ              F EA  E SL F LA FDGI+GLGF  +AVG   P  D MVEQGL+ + VFSF+LNRD +  +GGE+V GG DP H+    T++PVT   YWQ ++  + +G     +C  GC+AI+D+GTSL+ GP+  +  +N AIGG
Sbjct:  120 KASSSFRPNGTKFAIQYGTGRLSGILSQDNLTIGGIHDAFVTFGEALWEPSLIFALAHFDGILGLGFPTLAVGGVQPPLDAMVEQGLLEKPVFSFYLNRDSEGSDGGELVLGGSDPAHYVPPLTFIPVTIPAYWQVHMESVKVGT-GLSLCAQGCSAILDTGTSLITGPSEEIRALNKAIGG 300          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: CATE_MOUSE (Cathepsin E OS=Mus musculus GN=Ctse PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.038e-38
Identity = 78/192 (40.62%), Postives = 110/192 (57.29%), Query Frame = 1
Query:    4 KSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGG---EGVVSAEC 570
            +S+TYTE+G    I YG+GS++G                  F E+ +E   TF+ A FDGI+GLG+  +A G   PV+DNM+ Q LV+  +FS +L+ DP    G E+ FGG DP HF G   ++PVTK+ YWQ  L  I +G+ +   C  GC AIVD+GTSL+ GP   +  +  AIG    +G  + +C
Sbjct:  125 QSDTYTEVGNHFSIQYGTGSLTGIIGADQVSVEGLTVDGQQFGESVKEPGQTFVNAEFDGILGLGYPSLAAGGVTPVFDNMMAQNLVALPMFSVYLSSDPQGGSGSELTFGGYDPSHFSGSLNWIPVTKQAYWQIALDGIQVGD-TVMFCSEGCQAIVDTGTSLITGPPDKIKHLQEAIGATPIDGEYAVDC 315          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: CATEA_XENLA (Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.989e-37
Identity = 79/194 (40.72%), Postives = 113/194 (58.25%), Query Frame = 1
Query:    7 SNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG---GEGVVSAECKLV 579
            S+TY   G +  + YG+GS+SG                  F E+  E   TF+ A FDGI+GLG+  IAVGD  PV+DNM+ Q LV   +FS +++R+P++  GGE+VFGG D   F G+  +VPVT +GYWQ  L ++ I N     C GGC AIVD+GTSL+ GP+  + ++ + IG     G    +C ++
Sbjct:  121 SSTYESNGNNFSLQYGTGSLSGVIGIDAVTVEGILVQNQQFGESVSEPGSTFVDAEFDGILGLGYPSIAVGDCTPVFDNMIAQNLVELPMFSVYMSRNPNSAVGGELVFGGFDASRFSGQLNWVPVTNQGYWQIQLDNVQI-NGEVLFCSGGCQAIVDTGTSLITGPSSDIVQLQNIIGASAANGDYEVDCSVL 313          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: CATEB_XENLA (Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.980e-36
Identity = 77/179 (43.02%), Postives = 106/179 (59.22%), Query Frame = 1
Query:    7 SNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 543
            S+TY   G +  + YG+GS+SG                  F E+  E   TF+ A FDGI+GLG+  IAVG   PV+DNM+ Q LV   +FS +++RDP++  GGE+VFGG D   F G+  +VPVT +GYWQ  L +I I N     C GGC AIVD+GTS++ GP+  + ++   IG
Sbjct:  121 SSTYESNGNNFSLQYGTGSLSGVIGIDSVTVEGILVQNQQFGESVSEPGSTFVDASFDGILGLGYPSIAVGGCTPVFDNMIAQNLVELPMFSVYMSRDPNSPVGGELVFGGFDASRFSGQLNWVPVTNQGYWQIQLDNIQI-NGEVVFCSGGCQAIVDTGTSMITGPSSDIVQLQSIIG 298          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: NAPSA_HUMAN (Napsin-A OS=Homo sapiens GN=NAPSA PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.586e-36
Identity = 80/196 (40.82%), Postives = 116/196 (59.18%), Query Frame = 1
Query:    1 RKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQ 588
            + S+++   G    I YG+G + G  S+              F EA  E SL F  A FDGI+GLGF  ++V    P  D +VEQGL+ + VFSF+LNRDP+  +GGE+V GG DP H+    T+VPVT   YWQ ++  + +G   T +C  GCAAI+D+GTSL+ GPT  +  ++ AIGG  +++ E  ++ S+
Sbjct:  125 KASSSFQANGTKFAIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAFAHFDGILGLGFPILSVEGVRPPMDVLVEQGLLDKPVFSFYLNRDPEEPDGGELVLGGSDPAHYIPPLTFVPVTVPAYWQIHMERVKVGPGLT-LCAKGCAAILDTGTSLITGPTEEIRALHAAIGGIPLLAGEYIILCSE 319          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: CATE_HUMAN (Cathepsin E OS=Homo sapiens GN=CTSE PE=1 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.283e-35
Identity = 79/197 (40.10%), Postives = 115/197 (58.38%), Query Frame = 1
Query:    4 KSNTYTEIGKSCEINYGSGSISGFF-----SQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGG---EGVVSAEC 570
            +S+TY++ G+S  I YG+GS+SG       S               F E+  E   TF+ A FDGI+GLG+  +AVG   PV+DNM+ Q LV   +FS +++ +P+   G E++FGG D  HF G   +VPVTK+ YWQ  L +I +G  +   C  GC AIVD+GTSL+ GP+  + ++ +AIG    +G  + EC
Sbjct:  124 QSSTYSQPGQSFSIQYGTGSLSGIIGADQVSAFATQVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGG-TVMFCSEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPVDGEYAVEC 319          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: CATE_CAVPO (Cathepsin E OS=Cavia porcellus GN=CTSE PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.189e-35
Identity = 75/179 (41.90%), Postives = 105/179 (58.66%), Query Frame = 1
Query:    7 SNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 543
            S+TY E+G S  I YG+GS++G                  F E+ +E   TF+ A FDGI+GLG+  +A G   PV+DNM+ Q LV+  +FS +++ +P    G E+ FGG DP HF G   +VPVTK+ YWQ  L  I +G+ S   C  GC AIVD+GTSL+ GP   + ++  A+G
Sbjct:  121 SSTYREVGNSFSIQYGTGSLTGIIGADQVSVEGLTVVGQQFGESVQEPGKTFVHAEFDGILGLGYPSLAAGGVTPVFDNMMAQNLVALPMFSVYMSSNPGG-SGSELTFGGYDPSHFSGSLNWVPVTKQAYWQIALDGIQVGD-SVMFCSEGCQAIVDTGTSLITGPPGKIKQLQEALG 297          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: CARDE_CYNCA (Cardosin-E (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.161e-34
Identity = 63/89 (70.79%), Postives = 75/89 (84.27%), Query Frame = 1
Query:  277 FSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 543
            FSFWLNR+ D EEGGE+VFGG+DP HF+G HTYVPVT + YWQF +GD+LIG++STG C  GC A  DSGTSLL+GPT +VT+INHAIG
Sbjct:   67 FSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIG 155          
The following BLAST results are available for this feature:
BLAST of FC929912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
CATE_RAT1.620e-3841.15Cathepsin E OS=Rattus norvegicus GN=Ctse PE=1 SV=3[more]
CATE_RABIT2.763e-3841.45Cathepsin E OS=Oryctolagus cuniculus GN=CTSE PE=2 ... [more]
NAPSA_MOUSE8.038e-3843.96Napsin-A OS=Mus musculus GN=Napsa PE=1 SV=1[more]
CATE_MOUSE8.038e-3840.63Cathepsin E OS=Mus musculus GN=Ctse PE=1 SV=1[more]
CATEA_XENLA3.989e-3740.72Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=... [more]
CATEB_XENLA1.980e-3643.02Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=... [more]
NAPSA_HUMAN2.586e-3640.82Napsin-A OS=Homo sapiens GN=NAPSA PE=1 SV=1[more]
CATE_HUMAN1.283e-3540.10Cathepsin E OS=Homo sapiens GN=CTSE PE=1 SV=2[more]
CATE_CAVPO2.189e-3541.90Cathepsin E OS=Cavia porcellus GN=CTSE PE=1 SV=1[more]
CARDE_CYNCA3.161e-3470.79Cardosin-E (Fragments) OS=Cynara cardunculus PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionC34001G07EF PostHarvC1 Citrus clementina cDNA clone C34001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929912 ID=FC929912; Name=FC929912; organism=Citrus clementina; type=EST; length=697bp
AGAAAATCCAATACATATACCGAAATTGGAAAATCCTGTGAAATAAACTA
TGGATCTGGATCAATTTCTGGCTTCTTCAGTCAAGACAATGTTGAAGTTG
GGGATGTTGTTGTCAAGGATCAGGTTTTCATTGAGGCTACACGAGAAGGG
AGTCTCACTTTTCTATTGGCAAGGTTTGATGGAATAATAGGGCTTGGGTT
CCGGGAAATTGCAGTTGGGGATGCTGTGCCTGTGTGGGACAATATGGTTG
AGCAGGGCCTTGTAAGCGAGGAGGTCTTCTCATTCTGGCTCAACAGGGAT
CCAGACGCTGAAGAGGGTGGAGAGATTGTTTTTGGCGGTGTTGATCCAAA
GCACTTTAAAGGGAAGCATACCTATGTTCCTGTTACTAAAAAAGGCTACT
GGCAGTTCAATTTGGGAGATATATTAATTGGGAATCAGTCCACAGGTGTT
TGTGAGGGTGGTTGTGCTGCCATTGTGGACTCAGGAACATCCTTACTAGC
CGGTCCAACACCTGTTGTGACTGAAATCAATCATGCCATTGGTGGTGAAG
GAGTTGTTAGTGCGGAGTGTAAGCTAGTTGTTTCCCAGTATGGGGATTTA
ATATGGGATCTCTTAGTATCAGGGCTACTACCTGAGAAAGTATGTCAGCA
GATTGGTTTATGTGCTTTCAATGGCGCTGAATATGTGAGTACTGGGA
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