FC929912

Overview
NameFC929912
Unique NameFC929912
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: PEPA_BOVIN (Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 5.222e-29
Identity = 72/199 (36.18%), Postives = 107/199 (53.77%), Query Frame = 1
Query:    7 SNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDL 600
            S+TY    ++  I YG+GS++G                  F +  T  GS  +  A FDGI+GL +  I+   A PV+DN+ +QGLVS+++FS +L+   + E G  ++FG +D  ++ G   +VPV+ +GYWQ  +  I +  +S   C  GC AIVD+GTSLLAGPT  ++ I   IG     S E  +  S    L
Sbjct:  107 SSTYEATSETLSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYY-APFDGILGLAYPSISSSGATPVFDNIWDQGLVSQDLFSVYLS--SNEESGSVVIFGDIDSSYYSGSLNWVPVSVEGYWQITVDSITMNGESI-ACSDGCQAIVDTGTSLLAGPTTAISNIQSYIGASEDSSGEVVISCSSIDSL 301          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: PAG2_PIG (Pregnancy-associated glycoprotein 2 OS=Sus scrofa GN=PAG2 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.222e-29
Identity = 72/178 (40.45%), Postives = 101/178 (56.74%), Query Frame = 1
Query:    7 SNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAI 540
            S+T+ + GKS ++ YGSG +SGF  Q              F  +  E    F  A FDGI+GL +  IA+     V DN+ +Q  +SE VF+F+L+   D EEG  ++FGGVD K++KG   +VP+T+  YWQ  L  I    +  G C  GC AIVD+GTS+L GP+  V +I+  I
Sbjct:  123 SSTFHDRGKSIKLEYGSGKMSGFLGQDTVRIGQLTSTGQAFGLSKEETGKAFEHAIFDGILGLAYPSIAIKGTTTVIDNLKKQDQISEPVFAFYLS--SDKEEGSVVMFGGVDKKYYKGDLKWVPLTQTSYWQIALDRITCRGRVIG-CPRGCQAIVDTGTSMLHGPSKAVAKIHSLI 297          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: PEPA_PIG (Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 8.908e-29
Identity = 72/192 (37.50%), Postives = 106/192 (55.21%), Query Frame = 1
Query:    7 SNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG------GEGVVS 561
            S+T+    +   I YG+GS++G                  F +  T  GS  +  A FDGI+GL +  I+   A PV+DN+ +QGLVS+++FS +L+ + D+  G  ++ GG+D  ++ G   +VPV+ +GYWQ  L  I +  + T  C GGC AIVD+GTSLL GPT  +  I   IG      GE V+S
Sbjct:  120 SSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYY-APFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDS--GSVVLLGGIDSSYYTGSLNWVPVSVEGYWQITLDSITMDGE-TIACSGGCQAIVDTGTSLLTGPTSAIANIQSDIGASENSDGEMVIS 307          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: PEPA_HUMAN (Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.908e-29
Identity = 74/209 (35.41%), Postives = 112/209 (53.59%), Query Frame = 1
Query:    7 SNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG------GEGVVSAECKLVVSQYGDLIWDL 612
            S+TY    ++  I YG+GS++G                  F +  T  GS  +  A FDGI+GL +  I+   A PV+DN+  QGLVS+++FS +L+ D   + G  ++FGG+D  ++ G   +VPVT +GYWQ  +  I +  ++   C  GC AIVD+GTSLL GPT  +  I   IG      G+ VVS      +S   D+++ +
Sbjct:  123 SSTYQSTSETVSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYY-APFDGILGLAYPSISSSGATPVFDNIWNQGLVSQDLFSVYLSADD--QSGSVVIFGGIDSSYYTGSLNWVPVTVEGYWQITVDSITMNGEAI-ACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCS---AISSLPDIVFTI 324          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: PEPA_MACMU (Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.163e-28
Identity = 74/209 (35.41%), Postives = 113/209 (54.07%), Query Frame = 1
Query:    7 SNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG------GEGVVSAECKLVVSQYGDLIWDL 612
            S+TY     +  I YG+GS++G                  F +  T  GS  +  A FDGI+GL +  I+   A PV+DN+ +QGLVS+++FS +L+ D   + G  ++FGG+D  ++ G   +VPV+ +GYWQ ++  I +  ++   C  GC AIVD+GTSLL GPT  +  I   IG      GE VVS      +S   D+++ +
Sbjct:  123 SSTYQSTSGTLSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYY-APFDGILGLAYPSISSSGATPVFDNIWDQGLVSQDLFSVYLSADD--QSGSVVIFGGIDSSYYTGSLNWVPVSVEGYWQISVDSITMNGEAI-ACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGEMVVSCS---AISSLPDIVFTI 324          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: PEPA1_MACFU (Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.163e-28
Identity = 74/209 (35.41%), Postives = 113/209 (54.07%), Query Frame = 1
Query:    7 SNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG------GEGVVSAECKLVVSQYGDLIWDL 612
            S+TY     +  I YG+GS++G                  F +  T  GS  +  A FDGI+GL +  I+   A PV+DN+ +QGLVS+++FS +L+ D   + G  ++FGG+D  ++ G   +VPV+ +GYWQ ++  I +  ++   C  GC AIVD+GTSLL GPT  +  I   IG      GE VVS      +S   D+++ +
Sbjct:  123 SSTYQSTSGTLSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYY-APFDGILGLAYPSISSSGATPVFDNIWDQGLVSQDLFSVYLSADD--QSGSVVIFGGIDSSYYTGSLNWVPVSVEGYWQISVDSITMNGEAI-ACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGEMVVSCS---AISSLPDIVFTI 324          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: CHYM_SHEEP (Chymosin OS=Ovis aries GN=CYM PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.163e-28
Identity = 65/181 (35.91%), Postives = 103/181 (56.91%), Query Frame = 1
Query:    1 RKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 543
            RKS+T+  +GK   I YG+GS+ G                     +T+E    F  A FDGI+G+ +  +A   +VPV+DNM+++ LV++++FS +++R   + +G  +  G +DP ++ G   +VPVT + YWQF +  + I   +   CEGGC AI+D+GTS L GP+  +  I  AIG
Sbjct:  119 RKSSTFQNLGKPLSIRYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTYAEFDGILGMAYPSLASEYSVPVFDNMMDRRLVAQDLFSVYMDR---SGQGSMLTLGAIDPSYYTGSLHWVPVTLQKYWQFTVDSVTISG-AVVACEGGCQAILDTGTSKLVGPSSDILNIQQAIG 295          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: CARP_YEAST (Saccharopepsin OS=Saccharomyces cerevisiae GN=PEP4 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.163e-28
Identity = 69/182 (37.91%), Postives = 101/182 (55.49%), Query Frame = 1
Query:    7 SNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWL-NRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGE 549
            S++Y   G    I YG+GS+ G+ SQ              F EAT E  LTF   +FDGI+GLG+  I+V   VP + N ++Q L+ E+ F+F+L +   D E GGE  FGG+D   FKG  T++PV +K YW+     I +G++   +   G A  +D+GTSL+  P+ +   IN  IG +
Sbjct:  138 SSSYKANGTEFAIQYGTGSLEGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAELESHGAA--IDTGTSLITLPSGLAEMINAEIGAK 317          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: PEPA_SUNMU (Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.519e-28
Identity = 70/196 (35.71%), Postives = 110/196 (56.12%), Query Frame = 1
Query:    1 RKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVS 585
            +KS+T+    ++  I YG+GS++G                  F +  T  GS  +  + FDGI+GL +  IA   A PV+DNM  QGLVS+++FS +L+ +   + G  ++FGG+D  ++ G   +VP++ +GYWQ  +  I +  Q+   C G C AIVD+GTSLL+GP   +  I  +IG     +A  ++VVS
Sbjct:  120 QKSSTFQSTSQTLSIAYGTGSMTGVLGYDTVQVAGIADTNQIFGLSQTEPGSFLYY-SPFDGILGLAYPNIASSGATPVFDNMWNQGLVSQDLFSVYLSSND--QSGSVVIFGGIDSSYYTGNLNWVPLSSEGYWQITVDSITMNGQAI-ACSGSCQAIVDTGTSLLSGPNNAIANIQKSIGAS--QNANGQMVVS 309          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: PEPA4_MACFU (Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.519e-28
Identity = 74/208 (35.58%), Postives = 109/208 (52.40%), Query Frame = 1
Query:    7 SNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG------GEGVVSAECKLVVSQYGDLIWDL 612
            S+TY    K+  I YG+GS++G                  F  +  E       A FDGI+GL +  I+   A PV+DN+  Q LVS+++FS +L+ D   + G  ++FGG+D  ++ G   +VPV+ +GYWQ ++  I + N  T  C  GC AIVD+GTSLL GPT  +  I   IG      GE VVS      +S   D+++ +
Sbjct:  123 SSTYRATSKTVSITYGTGSMTGILGYDTVKVGGISDTNQIFGLSETEPGFFLYFAPFDGILGLAYPSISSSGATPVFDNIWNQRLVSQDLFSVYLSADD--QSGSVVIFGGIDSSYYTGSLNWVPVSVEGYWQISVDSITM-NGKTIACAKGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGEMVVSCS---AISSLPDIVFTI 324          
The following BLAST results are available for this feature:
BLAST of FC929912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
PEPA_BOVIN5.222e-2936.18Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2[more]
PAG2_PIG5.222e-2940.45Pregnancy-associated glycoprotein 2 OS=Sus scrofa ... [more]
PEPA_PIG8.908e-2937.50Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3[more]
PEPA_HUMAN8.908e-2935.41Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1[more]
PEPA_MACMU1.163e-2835.41Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1[more]
PEPA1_MACFU1.163e-2835.41Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 S... [more]
CHYM_SHEEP1.163e-2835.91Chymosin OS=Ovis aries GN=CYM PE=2 SV=1[more]
CARP_YEAST1.163e-2837.91Saccharopepsin OS=Saccharomyces cerevisiae GN=PEP4... [more]
PEPA_SUNMU1.519e-2835.71Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2[more]
PEPA4_MACFU1.519e-2835.58Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionC34001G07EF PostHarvC1 Citrus clementina cDNA clone C34001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929912 ID=FC929912; Name=FC929912; organism=Citrus clementina; type=EST; length=697bp
AGAAAATCCAATACATATACCGAAATTGGAAAATCCTGTGAAATAAACTA
TGGATCTGGATCAATTTCTGGCTTCTTCAGTCAAGACAATGTTGAAGTTG
GGGATGTTGTTGTCAAGGATCAGGTTTTCATTGAGGCTACACGAGAAGGG
AGTCTCACTTTTCTATTGGCAAGGTTTGATGGAATAATAGGGCTTGGGTT
CCGGGAAATTGCAGTTGGGGATGCTGTGCCTGTGTGGGACAATATGGTTG
AGCAGGGCCTTGTAAGCGAGGAGGTCTTCTCATTCTGGCTCAACAGGGAT
CCAGACGCTGAAGAGGGTGGAGAGATTGTTTTTGGCGGTGTTGATCCAAA
GCACTTTAAAGGGAAGCATACCTATGTTCCTGTTACTAAAAAAGGCTACT
GGCAGTTCAATTTGGGAGATATATTAATTGGGAATCAGTCCACAGGTGTT
TGTGAGGGTGGTTGTGCTGCCATTGTGGACTCAGGAACATCCTTACTAGC
CGGTCCAACACCTGTTGTGACTGAAATCAATCATGCCATTGGTGGTGAAG
GAGTTGTTAGTGCGGAGTGTAAGCTAGTTGTTTCCCAGTATGGGGATTTA
ATATGGGATCTCTTAGTATCAGGGCTACTACCTGAGAAAGTATGTCAGCA
GATTGGTTTATGTGCTTTCAATGGCGCTGAATATGTGAGTACTGGGA
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