FC929912

Overview
NameFC929912
Unique NameFC929912
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: PEPA2_MACFU (Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.984e-28
Identity = 74/209 (35.41%), Postives = 112/209 (53.59%), Query Frame = 1
Query:    7 SNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG------GEGVVSAECKLVVSQYGDLIWDL 612
            S+TY     +  I YG+GS++G                  F +  T  GS  +  A FDGI+GL +  I+   A PV+DN+  QGLVS+++FS +L+ D   + G  ++FGG+D  ++ G   +VPV+ +GYWQ ++  I +  ++   C  GC AIVD+GTSLL GPT  +  I   IG      GE VVS      +S   D+++ +
Sbjct:  123 SSTYQSTSGTVSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYY-APFDGILGLAYPSISSSGATPVFDNIWNQGLVSQDLFSVYLSADD--QSGSVVIFGGIDSSYYTGSLNWVPVSVEGYWQISVDSITMNGEAI-ACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGEMVVSCS---AISSLPDIVFTI 324          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: PEP2B_GADMO (Pepsin-2B OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.592e-28
Identity = 74/198 (37.37%), Postives = 102/198 (51.52%), Query Frame = 1
Query:    1 RKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG---GEGVVSAECKLVVS 585
            R+S+TY E GK+ ++ YG+G + G   Q                E+  E       A FDGI+GL +  IA   AVPV+DNM  Q LV +++FSF+L+       G E++ GGVD  H+ G   ++PVT + YWQ  L  I +  Q T  CE GC AIVD+GTS +  P   +  I   IG    +G +   C  V S
Sbjct:   59 RQSSTYVETGKTVDLTYGTGGMRGILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLS--GGGANGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQ-TAACE-GCQAIVDTGTSKIVAPVSALANIMKDIGASENQGEMMGNCASVQS 252          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: RENI_SHEEP (Renin OS=Ovis aries GN=REN PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.385e-28
Identity = 67/184 (36.41%), Postives = 105/184 (57.07%), Query Frame = 1
Query:    4 KSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEE--GGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGE 549
            +S++Y E G    I YGSG + GF SQ              F E T      F+LA+FDG++G+GF   AVG   PV+D+++ Q +++E+VFS + +RD       GGEIV GG DP++++    YV ++K G WQ  +  + +   +T +CE GC  +VD+G S ++GPT  +  +  A+G +
Sbjct:  128 ESSSYVENGTEFTIYYGSGKVKGFLSQDLVTVGGITVTQT-FGEVTELPLRPFMLAKFDGVLGMGFPAQAVGGVTPVFDHILAQRVLTEDVFSVYYSRDSKNSHLLGGEIVLGGSDPQYYQENFHYVSISKPGSWQIRMKGVSV-RSTTLLCEEGCMVVVDTGASYISGPTSSLRLLMEALGAK 309          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: CARP_NANOT (Vacuolar protease A OS=Nannizzia otae (strain CBS 113480) GN=PEP2 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.421e-28
Identity = 68/168 (40.48%), Postives = 90/168 (53.57%), Query Frame = 1
Query:    7 SNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPT 510
            S+T+T  G S  I YGSGS+ GF SQ              F EAT E  L F   RFDGI+G+G+  I+V    P +  MVEQGLV E VFSF+L       +   + FGG D  H+ G  T +P+ +K YW+     I +G  +  +   G   I+D+GTSL+A PT
Sbjct:  134 SSTFTRNGTSFAIRYGSGSLEGFVSQDNVQIGDMKIKNQLFAEATSEPGLAFAFGRFDGILGMGYDTISVNKITPPFYKMVEQGLVDEPVFSFYLGDTNKDGDQSVVTFGGADKSHYTGDITTIPLRRKAYWEVEFNAITLGKDTATLDNTG--IILDTGTSLIALPT 299          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: CHYM_CALJA (Chymosin OS=Callithrix jacchus GN=CYM PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.680e-27
Identity = 62/180 (34.44%), Postives = 102/180 (56.67%), Query Frame = 1
Query:    4 KSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 543
            KS+T+  + KS  I YG+GS+ G                     +T+E    F  + FDGI+GL +  +A   +VPV+DNM+++ LV++++FS +++R+   E+G  +  G +DP ++ G   ++PVT + YWQF +  + +       C+GGC AI+D+GTS+L GP   +  I  AIG
Sbjct:  120 KSSTFQNMDKSLSIQYGTGSMQGLLGYDTVTVSSIVDPHQTVGLSTQEPGDVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVAQDLFSVYMSRN---EQGSMLTLGAIDPSYYTGSLHWIPVTVQEYWQFTVDSVTVDGVVV-ACDGGCQAILDTGTSMLVGPGSDIFNIQQAIG 295          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: PEPA_RHIFE (Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.865e-27
Identity = 73/195 (37.44%), Postives = 107/195 (54.87%), Query Frame = 1
Query:    1 RKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIV-FGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG------GEGVVS 561
            ++S+TY    +   + YG+GS++G                  F +  T  GS  +  A FDGI+GL +  IA   A PV+DN+  QGLVS+++FS +L+ +   ++GG +V FGG+D  +F G   +VP++ + YWQ  +  I +  Q    C G C AIVD+GTSLL+GPT  +  I   IG      GE VVS
Sbjct:  119 QQSSTYQGTNQKLSVAYGTGSMTGILGYDTVQVGGITDTNQIFGLSETEPGSFLYY-APFDGILGLAYPSIASSGATPVFDNIWNQGLVSQDLFSVYLSSN---DQGGSVVMFGGIDSSYFTGNLNWVPLSSETYWQITVDSITMNGQVI-ACSGSCQAIVDTGTSLLSGPTNAIASIQGYIGASQNANGEMVVS 308          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: CHYM_BOVIN (Chymosin OS=Bos taurus GN=CYM PE=1 SV=3)

HSP 1 Score: 122.094 bits (305), Expect = 2.865e-27
Identity = 63/181 (34.81%), Postives = 101/181 (55.80%), Query Frame = 1
Query:    1 RKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 543
            RKS+T+  +GK   I+YG+GS+ G                     +T+E    F  A FDGI+G+ +  +A   ++PV+DNM+ + LV++++FS +++R+    +   +  G +DP ++ G   +VPVT + YWQF +  + I       CEGGC AI+D+GTS L GP+  +  I  AIG
Sbjct:  119 RKSSTFQNLGKPLSIHYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRN---GQESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVV-ACEGGCQAILDTGTSKLVGPSSDILNIQQAIG 295          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: PEPB_CANFA (Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.888e-27
Identity = 60/182 (32.97%), Postives = 98/182 (53.85%), Query Frame = 1
Query:    4 KSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGE 549
            +S+TY    ++  + YG GS++                   F  +  E +  F  + FDGI+G+ +  +AV +   V  NM++QG +++ +FSF+ +  P  E GGE++ GGVD + + G+  + PVT++ YWQ  + + LIGNQ+TG+C  GC  IVD+GT  L  P   +     A G +
Sbjct:  120 RSSTYQSSEQTYTLAYGFGSLTVLLGYDTVTVQNIVIHNQLFGMSENEPNYPFYYSYFDGILGMAYSNLAVDNGPTVLQNMMQQGQLTQPIFSFYFSPQPTYEYGGELILGGVDTQFYSGEIVWAPVTREMYWQVAIDEFLIGNQATGLCSQGCQGIVDTGTFPLTVPQQYLDSFVKATGAQ 301          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: PEPA_CALJA (Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.337e-27
Identity = 71/211 (33.65%), Postives = 114/211 (54.03%), Query Frame = 1
Query:    1 RKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG------GEGVVSAECKLVVSQYGDLIWDL 612
            ++S+TY    ++  I YG+GS++G                  F +  T  GS  +  + FDGI+GL +  I+   A PV+DN+  Q LVS+++FS +L+ +   + G  ++FGG+D  ++ G   +VPV+ +GYWQ  +  I +  ++   C  GC AIVD+GTSLL+GPT  +  I   IG      GE VVS      +S   D+++ +
Sbjct:  120 QESSTYQATSQTLSIAYGTGSMTGILGYDTVQVGGIADTNQIFGLSETEPGSFLYY-SPFDGILGLAYPSISSSGATPVFDNIWNQDLVSQDLFSVYLSSND--QSGSVVMFGGIDSSYYTGSLNWVPVSAEGYWQITVDSITMNGEAI-ACAEGCQAIVDTGTSLLSGPTSPIANIQSYIGASENSNGEMVVSCS---AISSLPDIVFTI 323          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: CARPV_CANAL (Vacuolar aspartic protease OS=Candida albicans GN=APR1 PE=3 SV=3)

HSP 1 Score: 119.783 bits (299), Expect = 1.422e-26
Identity = 67/180 (37.22%), Postives = 97/180 (53.89%), Query Frame = 1
Query:    7 SNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWL-NRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 543
            S+TY   G    I YGSGS+ G+ SQ              F EAT E  L F   +FDGI+GL +  I+V   VP   N + QGL+ +  F F+L + D D  +GG   FGG D   F+GK T++P+ +K YW+ +   I +G++   + + G A  +D+GTSL+  P+ +   IN  IG
Sbjct:  151 SSTYKVNGSEFSIQYGSGSMEGYISQDVLTIGDLVIPGQDFAEATSEPGLAFAFGKFDGILGLAYDTISVNHIVPPIYNAINQGLLEKPQFGFYLGSTDKDENDGGLATFGGYDASLFQGKITWLPIRRKAYWEVSFEGIGLGDEYAELHKTGAA--IDTGTSLITLPSSLAEIINAKIG 328          
The following BLAST results are available for this feature:
BLAST of FC929912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
PEPA2_MACFU1.984e-2835.41Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1[more]
PEP2B_GADMO2.592e-2837.37Pepsin-2B OS=Gadus morhua PE=1 SV=1[more]
RENI_SHEEP3.385e-2836.41Renin OS=Ovis aries GN=REN PE=2 SV=1[more]
CARP_NANOT4.421e-2840.48Vacuolar protease A OS=Nannizzia otae (strain CBS ... [more]
CHYM_CALJA1.680e-2734.44Chymosin OS=Callithrix jacchus GN=CYM PE=1 SV=1[more]
PEPA_RHIFE2.865e-2737.44Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 ... [more]
CHYM_BOVIN2.865e-2734.81Chymosin OS=Bos taurus GN=CYM PE=1 SV=3[more]
PEPB_CANFA4.888e-2732.97Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1[more]
PEPA_CALJA8.337e-2733.65Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1[more]
CARPV_CANAL1.422e-2637.22Vacuolar aspartic protease OS=Candida albicans GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34001G07EF PostHarvC1 Citrus clementina cDNA clone C34001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929912 ID=FC929912; Name=FC929912; organism=Citrus clementina; type=EST; length=697bp
AGAAAATCCAATACATATACCGAAATTGGAAAATCCTGTGAAATAAACTA
TGGATCTGGATCAATTTCTGGCTTCTTCAGTCAAGACAATGTTGAAGTTG
GGGATGTTGTTGTCAAGGATCAGGTTTTCATTGAGGCTACACGAGAAGGG
AGTCTCACTTTTCTATTGGCAAGGTTTGATGGAATAATAGGGCTTGGGTT
CCGGGAAATTGCAGTTGGGGATGCTGTGCCTGTGTGGGACAATATGGTTG
AGCAGGGCCTTGTAAGCGAGGAGGTCTTCTCATTCTGGCTCAACAGGGAT
CCAGACGCTGAAGAGGGTGGAGAGATTGTTTTTGGCGGTGTTGATCCAAA
GCACTTTAAAGGGAAGCATACCTATGTTCCTGTTACTAAAAAAGGCTACT
GGCAGTTCAATTTGGGAGATATATTAATTGGGAATCAGTCCACAGGTGTT
TGTGAGGGTGGTTGTGCTGCCATTGTGGACTCAGGAACATCCTTACTAGC
CGGTCCAACACCTGTTGTGACTGAAATCAATCATGCCATTGGTGGTGAAG
GAGTTGTTAGTGCGGAGTGTAAGCTAGTTGTTTCCCAGTATGGGGATTTA
ATATGGGATCTCTTAGTATCAGGGCTACTACCTGAGAAAGTATGTCAGCA
GATTGGTTTATGTGCTTTCAATGGCGCTGAATATGTGAGTACTGGGA
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