FC929912

Overview
NameFC929912
Unique NameFC929912
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: PAG1_PIG (Pregnancy-associated glycoprotein 1 OS=Sus scrofa GN=PAG1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.431e-18
Identity = 54/178 (30.34%), Postives = 89/178 (50.00%), Query Frame = 1
Query:    7 SNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAI 540
            S+T+    ++ ++   SG +SG                  F  +  E       A FDG++GLG+  +A+    PV+DN+ +QG + E VF+ +L+   + ++G  ++ GGVD   F G   +VP++ + YWQ  L  I       G C  GC AI+DSG++ L GP+  ++ I   I
Sbjct:  123 SSTFQSSNRTVKLAPHSGLVSGLLGYDTVQIGRFKSENQAFGLSQSEPVKELENAFFDGVLGLGYPSLAIQGTTPVFDNLRKQGQIPEPVFALYLS--TNTKKGSVLMIGGVDNNFFTGNLKWVPLSARNYWQITLDRITWRGVVVG-CTRGCQAILDSGSAFLLGPSRQISSIQKII 297          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: CARP_SYNRA (Syncephapepsin OS=Syncephalastrum racemosum GN=SPSR PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18
Identity = 66/197 (33.50%), Postives = 100/197 (50.76%), Query Frame = 1
Query:    4 KSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIE-ATREGSLTFLLARFDGIIGLGFREIA--VGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPV-TKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG----GEGVVSAEC 570
            KS+TY ++GKS +I+YG GS +   +                IE ATRE S +F     DGI+GLGF  I+   G   PV DN++ Q L+S+ +F  WL +  +   GGE VFGG +  H  G  T V V   +G++   +  + +G++S      G   I+D+GT+LL       +++  A G    G+G  +  C
Sbjct:  132 KSSTYKKVGKSWQISYGDGSSASGITATDNVELGGLKITGQTIELATRESS-SFSSGAIDGILGLGFDTISTVAGTKTPV-DNLISQNLISKPIFGVWLGKQSEG-GGGEYVFGGYNTDHIDGSLTTVKVDNSQGWYGVTVSGLKVGSKSVASSFDG---ILDTGTTLLIFDQATGSKVAAAYGAKDNGDGTYTISC 322          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: CARP5_RHINI (Rhizopuspepsin-5 OS=Rhizopus niveus PE=3 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 7.074e-18
Identity = 64/196 (32.65%), Postives = 90/196 (45.92%), Query Frame = 1
Query:    4 KSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAV--GDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPV-TKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGG----EGVVSAEC 570
            +S TY + G++  I+YG GS +                    IE  R  + +F     DG++GLGF  I    G   PV DN++ QGL+S  VF  +L ++ +   GGE +FGG D   FKG  T +PV    G++   +    IG        G   AI+D+GTSLL  P  V   +  A G     +G  S  C
Sbjct:  130 QSRTYAKDGRAWSISYGDGSSASGILGTDTVVLGGLTIQRQTIELARREASSFQNGPSDGLLGLGFNSITTVRGVKTPV-DNLISQGLISNPVFGVYLGKESNGG-GGEYIFGGYDSSKFKGSLTTIPVDNSNGWYGVTIRGASIGRSRVA---GSFEAILDTGTSLLVLPNDVARSVASAYGARDNYDGTFSISC 320          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: CARP_RHICH (Rhizopuspepsin OS=Rhizopus chinensis PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.585e-17
Identity = 60/210 (28.57%), Postives = 97/210 (46.19%), Query Frame = 1
Query:    1 RKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPV-WDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPV-TKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG----GEGVVSAECKLVVSQYGDLIWDL 612
            ++S+TY   G++  I+YG GS +                    IE  +  + +F     DG++GLGF  I     V    DN++ QGL+S  +F  +L +  +   GGE +FGG D   FKG  T VP+   +G+W   +    +G  +      G   I+D+GT+LL  P  V   +  A G    G+G  +  C    S++  L++ +
Sbjct:  129 KQSSTYQADGRTWSISYGDGSSASGILAKDNVNLGGLLIKGQTIELAKREAASFANGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKASNGG-GGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTSTVASSFDG---ILDTGTTLLILPNNVAASVARAYGASDNGDGTYTISCD--TSRFKPLVFSI 332          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: CARP3_RHINI (Rhizopuspepsin-3 OS=Rhizopus niveus PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.585e-17
Identity = 63/196 (32.14%), Postives = 89/196 (45.41%), Query Frame = 1
Query:    4 KSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAV--GDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPV-TKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGG----EGVVSAEC 570
            +S+TY   G++  I+YG GS +                    IE  R  +  F     DG++GLGF  I    G   PV DN++ QGL+S  VF  +L ++ +   GGE +FGG D   FKG  T +PV    G++   +    IG            AI+D+GTSLL  P  V + +  A G     +G  S  C
Sbjct:  129 ESSTYARDGRTWSISYGDGSSASGILGTDTVILGGLTIRHQTIELARREASQFQSGPSDGLLGLGFDSITTVRGVKTPV-DNLISQGLISNPVFGVYLGKESNGG-GGEYIFGGYDSSKFKGSLTTIPVDNSNGWYGITVRGTSIGGSRV---SSSFDAILDTGTSLLVLPNDVASSVAEAYGASDNYDGTFSISC 319          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: PLM2_PLAFA (Plasmepsin-2 OS=Plasmodium falciparum PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16
Identity = 55/177 (31.07%), Postives = 89/177 (50.28%), Query Frame = 1
Query:    4 KSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEA--TREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEI 528
            KS TY + G   E+NY SG++SGFFS+              FIE   T     T+  + FDGI+GLG++++++G   P+   +  Q  +   +F+F+L      +  G +  GG++ + ++G  TY  +    YWQ  L D  +GN    +       IVDSGTS +  PT  + ++
Sbjct:  186 KSRTYEKDGTKVEMNYVSGTVSGFFSKDLVTVGNLSLPYK-FIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYL--PVHDKHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITL-DAHVGN----IMLEKANCIVDSGTSAITVPTDFLNKM 354          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: CARP2_RHINI (Rhizopuspepsin-2 OS=Rhizopus niveus PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15
Identity = 56/196 (28.57%), Postives = 94/196 (47.96%), Query Frame = 1
Query:    4 KSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAV--GDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPV-TKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG----GEGVVSAEC 570
            +S+TY + G++  I+YG GS +                    IE  +  + +F      G++GLGF  I    G   PV DN++ QGL+S+ +F  +L ++ +   GGE +FGG D   + G  T +PV    G++   +    IG+          +AI+D+GT+LL  P  V + +  + G    G+G  + +C
Sbjct:  129 QSSTYAKDGRTWSISYGDGSSASGILGTDTVTLGGLKITKQTIELAKREATSFQSGPSYGLLGLGFDTITTVRGVKTPV-DNLISQGLISKPIFGVYLGKESNGG-GGEYIFGGYDSSKYSGSLTTIPVDNSNGWYGITIKGTTIGSSKV---SSSFSAILDTGTTLLILPNNVASAVARSYGASDNGDGTYTIDC 319          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: CARP4_RHINI (Rhizopuspepsin-4 OS=Rhizopus niveus PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.292e-15
Identity = 57/195 (29.23%), Postives = 89/195 (45.64%), Query Frame = 1
Query:    4 KSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPV-WDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTG-VCEGGCAAIVDSGTSLLAGPTPVVTEINHAI----GGEGVVSAEC 570
            +S+TY + G++  I+YG GS +                    IE  +  + +F     DG++GLGF  I     V    DN++ QGL+S  VF  +L ++ +   GGE +FGG D   F G  T + V     W    G  + G   +G       +AI+D+GT+LL  P+ V + +  A      G+G  +  C
Sbjct:  135 QSSTYAKDGRTWSISYGDGSSASGILGKDTVNLGGLKIKNQIIELAKREASSFSSGPSDGLLGLGFDSITTVSGVQTPMDNLISQGLISNPVFGVYLGKESNGG-GGEYIFGGYDSSKFSGDLTTIAVDNSNGW---YGITIDGASISGSQVSDSFSAILDTGTTLLILPSNVASSVAQAYNANDNGDGTYNINC 325          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: ASP6_CAEEL (Aspartic protease 6 OS=Caenorhabditis elegans GN=asp-6 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.249e-14
Identity = 57/186 (30.65%), Postives = 81/186 (43.55%), Query Frame = 1
Query:    7 SNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARF-----DGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEE--GGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 543
            S+T+ + GKS  I YGSG  +G   Q               +  T  G  + + A F     DGI+GL F  +AV   VP   N + QG++ + +FS WL     A    GG   +G +D  +      Y P++   Y+QF      +G+ S          I D+GTS L GP  VV  +  A G
Sbjct:  117 SSTFVKNGKSWTIQYGSGDAAGILGQDTVRFGAKGDSQLS-VPTTTFGIASKISADFKNDATDGILGLAFTSLAVDGVVPPLINAINQGILDQPLFSVWLEHRGAANNVGGGVFTYGAIDTTNCGALVAYQPLSSATYYQFKAAGFKLGSYSN---TKTVDVISDTGTSFLGGPQSVVDGLAKAAG 298          
BLAST of FC929912 vs. ExPASy Swiss-Prot
Match: ASPR1_PHARH (Aspartic protease OS=Phaffia rhodozyma GN=pr1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.094e-14
Identity = 59/183 (32.24%), Postives = 84/183 (45.90%), Query Frame = 1
Query:   13 TYTEIGK----SCEINYGSGS-ISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGG 546
            T T  GK    +  I+YG GS  SG   +              F   T E S +F     DGI GLG+  +A       + +++ QG V+  VFSF L     A    E+  GG++  H+ G  TY PVT+K YW   LG + +      +     +AI+D+GT+L+ GPT  V  +   I G
Sbjct:  138 TLTSTGKKQSGTFSISYGDGSSASGPVYKDNVVASGLQATSQVFGAVTSESS-SFSSDPSDGISGLGWPALAQLSGTSYFWSLINQGTVTSPVFSFRL-----ATTNSELYLGGINSAHYTGAITYTPVTQKAYWTIALGGVSV--NGAAINPSVSSAIIDTGTTLVYGPTAGVAALYAKIPG 312          
The following BLAST results are available for this feature:
BLAST of FC929912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
PAG1_PIG2.431e-1830.34Pregnancy-associated glycoprotein 1 OS=Sus scrofa ... [more]
CARP_SYNRA4.147e-1833.50Syncephapepsin OS=Syncephalastrum racemosum GN=SPS... [more]
CARP5_RHINI7.074e-1832.65Rhizopuspepsin-5 OS=Rhizopus niveus PE=3 SV=2[more]
CARP_RHICH4.585e-1728.57Rhizopuspepsin OS=Rhizopus chinensis PE=1 SV=2[more]
CARP3_RHINI4.585e-1732.14Rhizopuspepsin-3 OS=Rhizopus niveus PE=3 SV=1[more]
PLM2_PLAFA5.070e-1631.07Plasmepsin-2 OS=Plasmodium falciparum PE=1 SV=1[more]
CARP2_RHINI1.927e-1528.57Rhizopuspepsin-2 OS=Rhizopus niveus PE=3 SV=2[more]
CARP4_RHINI4.292e-1529.23Rhizopuspepsin-4 OS=Rhizopus niveus PE=3 SV=1[more]
ASP6_CAEEL1.249e-1430.65Aspartic protease 6 OS=Caenorhabditis elegans GN=a... [more]
ASPR1_PHARH8.094e-1432.24Aspartic protease OS=Phaffia rhodozyma GN=pr1 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionC34001G07EF PostHarvC1 Citrus clementina cDNA clone C34001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929912 ID=FC929912; Name=FC929912; organism=Citrus clementina; type=EST; length=697bp
AGAAAATCCAATACATATACCGAAATTGGAAAATCCTGTGAAATAAACTA
TGGATCTGGATCAATTTCTGGCTTCTTCAGTCAAGACAATGTTGAAGTTG
GGGATGTTGTTGTCAAGGATCAGGTTTTCATTGAGGCTACACGAGAAGGG
AGTCTCACTTTTCTATTGGCAAGGTTTGATGGAATAATAGGGCTTGGGTT
CCGGGAAATTGCAGTTGGGGATGCTGTGCCTGTGTGGGACAATATGGTTG
AGCAGGGCCTTGTAAGCGAGGAGGTCTTCTCATTCTGGCTCAACAGGGAT
CCAGACGCTGAAGAGGGTGGAGAGATTGTTTTTGGCGGTGTTGATCCAAA
GCACTTTAAAGGGAAGCATACCTATGTTCCTGTTACTAAAAAAGGCTACT
GGCAGTTCAATTTGGGAGATATATTAATTGGGAATCAGTCCACAGGTGTT
TGTGAGGGTGGTTGTGCTGCCATTGTGGACTCAGGAACATCCTTACTAGC
CGGTCCAACACCTGTTGTGACTGAAATCAATCATGCCATTGGTGGTGAAG
GAGTTGTTAGTGCGGAGTGTAAGCTAGTTGTTTCCCAGTATGGGGATTTA
ATATGGGATCTCTTAGTATCAGGGCTACTACCTGAGAAAGTATGTCAGCA
GATTGGTTTATGTGCTTTCAATGGCGCTGAATATGTGAGTACTGGGA
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