FC929915
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929915 vs. ExPASy Swiss-Prot
Match: IF6_AERPE (Translation initiation factor 6 OS=Aeropyrum pernix GN=eif6 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.116e-29 Identity = 78/213 (36.62%), Postives = 118/213 (55.40%), Query Frame = 1 Query: 76 RLMFENSCEVGVFSKLTNAFCLVAIG-GSESFYSTFEAELVDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 711 +L + +GV+ ++++ L G++ + E V + VV+ + G R++G L GN G+LLP D+E++ +R +L + V V + R +ALGN I CND LA L++E + ++D LGVEV ++AG VGS +NRGGL HP S E+L LS + +VP AGT+N G E + GL N + A G DTT E+ Sbjct: 11 KLSLYGNPNIGVYLTASDSYVLAPDDIGADDVRTISEVLGVAMERVVRLRVLGMRLVGVLTTGNSRGILLPEGV-DREVELVRKAL-EGVEVGIVPTRSNALGNVIVCNDRACLASPGLEKEALKTVSDTLGVEVVEGSVAGVYTVGSAIVVTNRGGLAHPDASEEELKFLSDVFKVPFEAGTINFGVEFVRTGLVANSYGALVGEDTTGPEI 221
BLAST of FC929915 vs. ExPASy Swiss-Prot
Match: IF6_PYRFU (Translation initiation factor 6 OS=Pyrococcus furiosus GN=eif6 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.043e-28 Identity = 79/215 (36.74%), Postives = 115/215 (53.49%), Query Frame = 1 Query: 76 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELVDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVV---VQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 711 +L FENS +GVF T+ L+ G E L +PVV+ S+ +RIIG L GN N +++P D EL+ ++N+ + + V + + +ALGN I ND AL + RE + I D+LGVEV R IAG + VGS +N+GGLVHP + E+L+ LS L +V + GT N G +G+ + N + G TT E+ Sbjct: 5 KLDFENSPYLGVFGIATDKVVLIREGLQEKKLEVIREVLK--VPVVEASLMKSRIIGVLGAGNSNAIIVPWYVWDSELEKIKNAFREYGIDTEVVPFQTKYTALGNLILTNDKGALVSSKFSREEAKKIGDILGVEVERGVIAGIVAVGSAGVVTNKGGLVHPEATDEELEWLSDLFKVDVYVGTANMGVPYVGSCMLANSYGVVVGHLTTGPEI 217
BLAST of FC929915 vs. ExPASy Swiss-Prot
Match: IF6_PYRHO (Translation initiation factor 6 OS=Pyrococcus horikoshii GN=eif6 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.668e-28 Identity = 78/215 (36.28%), Postives = 111/215 (51.63%), Query Frame = 1 Query: 76 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELVDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRI---EERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 711 RL FENS +GVF T+ L+ G E L +PV++ S+ +RIIG L GN N ++LP D E++ ++ +L + + + + +ALGN I ND AL R+ + I ++LGVEV R IAG VGS +N+GGLVHP TS E+L+ LS L +V + GT N G +G + N G TT E+ Sbjct: 5 RLDFENSPYLGVFGVATDRVVLIREGLQEKKLEVIRETLK--VPVIEVSVMKSRIIGTLATGNSNAIILPWYVWDAEIERIKKALSEYGIDMEVVPFRSKYTALGNLILTNDKAALVSAKFSRKEAQEIGEILGVEVERGVIAGLHAVGSAGVVTNKGGLVHPETSDEELEWLSDLFKVDVYVGTANMGVPYVGTCMLANSNGVVVGHLTTGPEI 217
BLAST of FC929915 vs. ExPASy Swiss-Prot
Match: IF6_PYRAB (Translation initiation factor 6 OS=Pyrococcus abyssi GN=eif6 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.014e-27 Identity = 80/215 (37.21%), Postives = 110/215 (51.16%), Query Frame = 1 Query: 76 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELVDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRI---EERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 711 RL FENS +GVF T+ LV G E L +PV++ SI +RIIG L GN N +L+P D E++ ++++ + + I + +ALGN I ND AL R+ + I D+LGVEV R IAG VGS +N+GGLVHP S E+L+ LS L +V + GT N G +G + N G TT E+ Sbjct: 5 RLDFENSPYLGVFGVATDRVVLVREGLQEKKLEVIREVLK--VPVIEASIMKSRIIGTLATGNSNAILVPWYVWDTEIERIKSAFKEYGIETEIVPFRTKYTALGNLILTNDKAALVSAKFSRDEAKEIGDILGVEVERGLIAGLHAVGSAGVVTNKGGLVHPEASDEELEWLSELFKVDVYVGTANMGVPYVGTCMLANSNGVVVGHLTTGPEI 217
BLAST of FC929915 vs. ExPASy Swiss-Prot
Match: IF6_THEON (Translation initiation factor 6 OS=Thermococcus onnurineus (strain NA1) GN=eif6 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.324e-27 Identity = 77/215 (35.81%), Postives = 110/215 (51.16%), Query Frame = 1 Query: 76 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELVDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIE---ERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 711 +L FENS +GV+ T+ L+ G E L +P+++TSI +RI+G GN N +++P D EL+H++N L + + RIE L+A GN I ND AL RE + + D+LGVEV R I VGS +NRGGLVHP + E+L+ L L +V + GT N G +G+ + N G TT E+ Sbjct: 5 KLDFENSPYLGVYGTATDRVALIREGLGEKKLEVLREVLK--VPLIETSIMKSRIVGVFAAGNSNAIVVPWYIWDAELEHIQNELNELDIDMRIEPFQSTLTAFGNLILANDKAALISVKFTREEAKKLEDILGVEVERGMIGDYHAVGSVGVVTNRGGLVHPEATDEELEWLRDLFKVDIYVGTANMGVPFVGSCMLANSHGVVVGHLTTGPEI 217
BLAST of FC929915 vs. ExPASy Swiss-Prot
Match: IF6_METST (Translation initiation factor 6 OS=Methanosphaera stadtmanae (strain DSM 3091) GN=eif6 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.729e-27 Identity = 76/215 (35.35%), Postives = 116/215 (53.95%), Query Frame = 1 Query: 67 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELVDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 711 M + + + +GV + +V+ G +S+ + + L +P++KT I G+ + G L GN NGLL+ EL LR + V+ + ++L+A+GN I ND+ AL + L E + II + L VEV +IAG +VGS + +NRG LVHP S E+LD + +L VP GTVNRG +++GA + N G+ TT EL Sbjct: 1 MIQKFDIDGNPNLGVSILAKDNVAIVSPGLQDSYLKSIKETLN--VPIIKTPICGSNLAGALMAGNSNGLLISPYVFSHELDVLREH---DINVEIMPDKLTAIGNIIVANDNGALVNPSLSDEAKRIIKNTLEVEVVETSIAGLDIVGSLVAATNRGALVHPDASEEELDLVEDVLGVPAEIGTVNRGVKLVGACIIANSNGVIVGNKTTGPEL 210
BLAST of FC929915 vs. ExPASy Swiss-Prot
Match: IF6_THEGJ (Translation initiation factor 6 OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=eif6 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.571e-27 Identity = 76/215 (35.35%), Postives = 110/215 (51.16%), Query Frame = 1 Query: 76 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELVDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRI---EERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 711 RL FENS +GV+ T+ ++ G E +T L +P+++TS+ +RI+G GN N L++P D EL + L + + + + RL+A GN I ND AL D RE I D+LGV V R IA VGS +N+GGLVHP + E+L+ LS L +V + GT N G +G+ + N + G TT E+ Sbjct: 5 RLDFENSPYLGVYGFATDRVAVIREGLGEKKLATLREVLK--VPLIETSVMKSRIVGIFVAGNSNALIVPWYIWDAELDFINAQLREYGIDMEVVPFQSRLTAFGNLILANDKGALVSKDFTREEARKIEDILGVPVERGVIADYTAVGSVGVVTNKGGLVHPEATDEELEWLSDLFKVDVYVGTANMGVPFVGSCMIANSYGVVVGHLTTGPEI 217
BLAST of FC929915 vs. ExPASy Swiss-Prot
Match: IF6_METMA (Translation initiation factor 6 OS=Methanosarcina mazei GN=eif6 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.581e-27 Identity = 76/203 (37.44%), Postives = 113/203 (55.67%), Query Frame = 1 Query: 103 VGVFSKLTNAFCLVAIGGSESFYSTFEAELVDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 711 +GVF+ T LV + E E +DV VV+T I G+ ++G L GN NG LLP+ ++ +E+Q R +P + + +RL+A+GN + ND AL H +L EIIA L VEV+R TIAG VG +N+G LVHP ++ + + L + +P+ GT N G++++G+GL N GS+TT EL Sbjct: 13 IGVFATCTEDLALVPPLTKPEVCTILE-EALDV-RVVETLINGSTVVGALSRGNSNGFLLPYGSSVEEMQK-RTGVPAGI----LPDRLNAVGNIVLANDSAALVHPELSDRALEIIARTLKVEVYRGTIAGIKNVGMAGVVTNKGLLVHPKVTVSEREALEEIFGLPVNIGTTNFGTQMLGSGLLANSKNFVAGSETTGPEL 208
BLAST of FC929915 vs. ExPASy Swiss-Prot
Match: IF6_PYRKO (Translation initiation factor 6 OS=Pyrococcus kodakaraensis GN=eif6 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.464e-26 Identity = 77/216 (35.65%), Postives = 113/216 (52.31%), Query Frame = 1 Query: 76 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELVDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPD---QVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGV-EVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 711 RL FENS +GV+ + T+ L+ G E L +P+++TSI +RI+G GN N +++P D EL+ ++ +L + + V + RL+ALGN I ND AL + RE I ++LGV EV R IA VGS +N+GGLVHP + E+L+ LS L V + GT N G +G+ + N + G TT E+ Sbjct: 5 RLDFENSPYLGVYGRATDRVLLLREGLGEKKLEVLREVLK--VPIIETSIMKSRIVGIFAAGNSNAIIVPWYIWDAELERIKTALNEFGIDMDVVPFKSRLTALGNLILTNDKAALVSKEFTREEANAIGEILGVDEVERGMIASYRSVGSVGVVTNKGGLVHPEATDEELEWLSDLFGVDIYVGTANMGVPFVGSCMLANSYGVVVGHLTTGPEI 218
BLAST of FC929915 vs. ExPASy Swiss-Prot
Match: IF6_METKA (Translation initiation factor 6 OS=Methanopyrus kandleri GN=eif6 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.562e-26 Identity = 64/170 (37.65%), Postives = 96/170 (56.47%), Query Frame = 1 Query: 202 IPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 711 + VV+T++ G+ ++G L N NG L P + E++ +R V V + +++A+GN + NDH AL H DLD E+I VLG V R + G VGS +++G +VHP + E+++ +S +L V + GTVNRGS +G G+ VN A G DTT EL Sbjct: 45 VEVVRTTVAGSNLVGALLAVNSNGALFPRHAREHEIRVVREL---GVEVDVLPSKMNAVGNLVLTNDHGALVHPDLDDHALEVIESVLGGRVVRGELGGVKTVGSAGVANSKGAVVHPGATEEEMERVSEVLGVDVEVGTVNRGSPYVGVGIVVNSKGAVVGEDTTGPEL 211 The following BLAST results are available for this feature:
BLAST of FC929915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929915 ID=FC929915; Name=FC929915; organism=Citrus clementina; type=EST; length=711bpback to top |