FC929915
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929915 vs. ExPASy Swiss-Prot
Match: IF6_METBF (Translation initiation factor 6 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=eif6 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.265e-26 Identity = 72/203 (35.47%), Postives = 107/203 (52.71%), Query Frame = 1 Query: 103 VGVFSKLTNAFCLVAIGGSESFYSTFEAELVDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 711 +GVF+ T LV G + E L +V+T + G+ +IG L GN NG L + T E++ L V + + +L+A+GN + ND AL H +L + E+IA L VEV+R TIAG VG +N+G LVHP + +++ L L ++P+ GT N G++++G+GL N GSDTT EL Sbjct: 13 IGVFATCTEDVVLVPTGTKPETCAILEDSLD--ARIVETLVNGSVVIGALSRGNSNGFLYSYGTDAGEMKELTG-----VEAEILPGKLNAVGNIVLANDSAALVHPELSDKAIEVIASTLKVEVYRGTIAGIKNVGMAGVVTNKGLLVHPKVTASEIETLEKLFELPVNIGTTNFGTQMLGSGLLANSKNYLAGSDTTGPEL 208
BLAST of FC929915 vs. ExPASy Swiss-Prot
Match: IF6_METBU (Translation initiation factor 6 OS=Methanococcoides burtonii (strain DSM 6242) GN=eif6 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.239e-25 Identity = 74/203 (36.45%), Postives = 110/203 (54.19%), Query Frame = 1 Query: 103 VGVFSKLTNAFCLVAIGGSESFYSTFEAELVDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 711 +GVF+ T +V IG + AE +DV V+ T I G+ ++G L GN NG L+ +L+ + +V V+ + + L+A+GN I ND AL H ++ + E+I+ VLGV+V R TIAG VG +NRG LVHP + ++L L + +P+ GT N GS+ +G+GL N GS+TT EL Sbjct: 13 LGVFATCTEDVAIVPIGTAGKAIDLL-AEQLDV-KVISTLINGSIVVGSLSKGNSNGFLISRDANVSDLKDV------EVPVEVLPDMLTAVGNVILANDTAALVHPEMTDSSIEVISRVLGVDVHRGTIAGLGTVGMAGVVTNRGLLVHPMVTPDELSVLEDVFALPIELGTTNYGSQAVGSGLLANSKGYVAGSNTTGHEL 207
BLAST of FC929915 vs. ExPASy Swiss-Prot
Match: IF6_NATPD (Translation initiation factor 6 OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=eif6 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.114e-25 Identity = 77/212 (36.32%), Postives = 104/212 (49.06%), Query Frame = 1 Query: 76 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELVDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 711 R S VGVF+ T+ + LV ES S FE EL + V T+I G+ +G L VGN+NGLL+ TD+E L VV + ++A GN + N+ A H DL R+ I + L V V R IA VG+ ++ G L HP T+ E LD L L V GT+N G ++G+GL N+ G +TT EL Sbjct: 3 RAALSGSSYVGVFATATDEYLLVRPDIEESLQSEFETELD--VTAVPTTIAGSGTVGSLAVGNENGLLVTERVTDRERDRLETETGLPVV--ELPGNINAAGNVVLANNEGAFVHPDLSRDALSAIEEALSVPVERGRIADVQTVGTAAVVTDDGVLSHPKTTDEKLDFLEELFGVYADIGTINYGGPLVGSGLVANNTGYIAGEETTGPEL 210
BLAST of FC929915 vs. ExPASy Swiss-Prot
Match: IF6_HYPBU (Translation initiation factor 6 OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=eif6 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.032e-25 Identity = 76/204 (37.25%), Postives = 105/204 (51.47%), Query Frame = 1 Query: 103 VGVFSKLTNAFCLVAIGGSESFYSTFEAELVDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNI-LVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 711 +GV+ N LV +E E L + V++T I I G + GN NGLLLP +EL +LR + D+V ++ +E R +ALGN IA N+ AL +D+ + I VLGVE Q NI VGS +NRGG+VHP S +++ L+++ V TVN G + AGL ND A G +TT EL Sbjct: 13 IGVYIYANNKIALVPPTLTEKDKKKIEETLG--VEVIETKIADMIINGVMIAGNDNGLLLPRIVKPEELDYLREHIGDKVRLEILEVRQTALGNLIAANNRGALVSPLIDKAILDKIKSVLGVETIYQRHLANIPTVGSMIVVTNRGGVVHPGVSDDEIRILNSVFGVEFTTATVNFGLYFVKAGLVANDHGALVGDETTGPEL 214
BLAST of FC929915 vs. ExPASy Swiss-Prot
Match: IF6_METTH (Translation initiation factor 6 OS=Methanobacterium thermoautotrophicum GN=eif6 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.986e-24 Identity = 72/215 (33.49%), Postives = 111/215 (51.63%), Query Frame = 1 Query: 67 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELVDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 711 M R+ + +GV+ +T++ L+ E F L + V+K SI G+ + G L VGN NG ++ + D+E+ L + + V RI ER +A+GN + ND+ A+A L + ++I DVL V+V T+AG +VGS + +NRG L++P S E++ + L V GTVN G +IGA N G +TT EL Sbjct: 1 MIRRINLSGNPNLGVYISVTDSVALIPQNTPEKFEGVLREALE--VEVLKVSISGSSLNGALAVGNSNGFVVSNQAMDREIDALAAAGVEAV---RIPERFTAVGNLVLANDNGAVASPLLSDDALQVIGDVLEVDVKVSTLAGLNIVGSMGAATNRGALLNPQASSEEIGIIEDTLGVEADVGTVNHGVTLIGACSVANSNGVLVGEETTGPEL 210
BLAST of FC929915 vs. ExPASy Swiss-Prot
Match: IF6_METB6 (Translation initiation factor 6 OS=Methanoregula boonei (strain 6A8) GN=eif6 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.986e-24 Identity = 69/209 (33.01%), Postives = 104/209 (49.76%), Query Frame = 1 Query: 85 FENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELVDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 711 F +GVF+++ ++ E F + L + ++ T+I G+ IIG L GN GL++ TD+EL L+ V + E ++A GN I ND A H DL E E I LGVEV T+ G G +N+G +VHP + +++ L T+ +P+ GT+N GS ++G GL VND G+ T+ EL Sbjct: 7 FAGDPNIGVFARVAGNIAVIPPEAPEEFRNAIREGLG--VELLVTTIQGSAIIGSLVAGNSRGLVVSGLATDEELAVLKKHRK----VMLLCETMNAAGNVIMANDTFAAVHPDLPAEVAEEIGAFLGVEVIHLTLGGVRTTGMAGVATNKGVIVHPRATAQEIARLETVSGIPVGTGTINMGSGLVGTGLLVNDTGYLAGNATSGFEL 209
BLAST of FC929915 vs. ExPASy Swiss-Prot
Match: IF6_SULIY (Translation initiation factor 6 OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=eif6 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.206e-24 Identity = 75/215 (34.88%), Postives = 115/215 (53.49%), Query Frame = 1 Query: 76 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELVDVI--PVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQ-TIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 711 RL + +GV+ N + +V G S + +V ++ +++ I + ++G GN NG+LLP +T D E + L+ +L D V+ + +++ALGN I N+ AL + + + E+II + LGVE R+ IA I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL ND G+ TT E+ Sbjct: 5 RLSIFGTDNIGVYIYTNNKYTVVPRG----LDSETKENIVQILGTELIEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFSVKIDIGTVNFGSVFIRSGLVANDKGTLVGASTTGPEI 214
BLAST of FC929915 vs. ExPASy Swiss-Prot
Match: IF6_SULIN (Translation initiation factor 6 OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=eif6 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.206e-24 Identity = 75/215 (34.88%), Postives = 115/215 (53.49%), Query Frame = 1 Query: 76 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELVDVI--PVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQ-TIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 711 RL + +GV+ N + +V G S + +V ++ +++ I + ++G GN NG+LLP +T D E + L+ +L D V+ + +++ALGN I N+ AL + + + E+II + LGVE R+ IA I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL ND G+ TT E+ Sbjct: 5 RLSIFGTDNIGVYIYTNNKYTVVPRG----LDSETKENIVQILGTELIEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFSVKIDIGTVNFGSVFIRSGLVANDKGTLVGASTTGPEI 214
BLAST of FC929915 vs. ExPASy Swiss-Prot
Match: IF6_SULIL (Translation initiation factor 6 OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=eif6 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.206e-24 Identity = 75/215 (34.88%), Postives = 115/215 (53.49%), Query Frame = 1 Query: 76 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELVDVI--PVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQ-TIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 711 RL + +GV+ N + +V G S + +V ++ +++ I + ++G GN NG+LLP +T D E + L+ +L D V+ + +++ALGN I N+ AL + + + E+II + LGVE R+ IA I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL ND G+ TT E+ Sbjct: 5 RLSIFGTDNIGVYIYTNNKYTVVPRG----LDSETKENIVQILGTELIEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFSVKIDIGTVNFGSVFIRSGLVANDKGTLVGASTTGPEI 214
BLAST of FC929915 vs. ExPASy Swiss-Prot
Match: IF6_SULIM (Translation initiation factor 6 OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=eif6 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.880e-24 Identity = 75/215 (34.88%), Postives = 115/215 (53.49%), Query Frame = 1 Query: 76 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELVDVI--PVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQ-TIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 711 RL + +GV+ N + +V G S + +V ++ +++ I + ++G GN NG+LLP +T D E + L+ +L D V+ + +++ALGN I N+ AL + + + E+II + LGVE R+ IA I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL ND G+ TT E+ Sbjct: 5 RLSIFGTDNIGVYIYTNNKYTVVPRG----LDSETKENIVQILGTELIEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFGVKIDIGTVNFGSVFIRSGLVANDKGTLVGASTTGPEI 214 The following BLAST results are available for this feature:
BLAST of FC929915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929915 ID=FC929915; Name=FC929915; organism=Citrus clementina; type=EST; length=711bpback to top |