FC929915
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929915 vs. ExPASy Swiss-Prot
Match: IF6_METM7 (Translation initiation factor 6 OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=eif6 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.269e-18 Identity = 61/174 (35.06%), Postives = 95/174 (54.60%), Query Frame = 1 Query: 202 IPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPD---QVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLV-AGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 711 IP + +I + +IG LCVGN NGLL+P TT++E++ ++ L + V ++R++ + +A GN I N+ + +L R + I DVL VE A VGS +++G LVHP T +L+ + +L+V V GT NRG +GA + N A G DT+ E+ Sbjct: 44 IPATQLNISNSSLIGSLCVGNSNGLLVPDITTEKEVELIKMFLKENSLDVNLERLKAKNTAFGNLILTNNKGCIISEELSR-FRKTIEDVLDVESGVGNYAELPTVGSNGVATDKGCLVHPLTDELELEWIQNILRVDYVERGTANRGVTSVGACILANSKGAVVGGDTSGPEI 216
BLAST of FC929915 vs. ExPASy Swiss-Prot
Match: IF6_METM5 (Translation initiation factor 6 OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=eif6 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.242e-17 Identity = 61/174 (35.06%), Postives = 95/174 (54.60%), Query Frame = 1 Query: 202 IPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPD---QVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLV-AGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 711 IP + +I + +IG LCVGN NGLL+P TT++E++ ++ L + V ++R++ + +A GN I N+ + +L R + I DVL VE A VGS +++G LVHP T +L+ + +L+V V GT NRG +GA + N A G DT+ E+ Sbjct: 44 IPATQLNISNSSLIGSLCVGNSNGLLVPDITTEKEVELIKMFLKENSLDVNLERLKAKNTAFGNLILTNNKGCIISEELSR-FRKTIEDVLDVESGVGNYAELPTVGSNGVATDKGCLVHPLTDELELEWIQDILRVDYVERGTANRGVTSVGACILANIKGAVVGGDTSGPEI 216
BLAST of FC929915 vs. ExPASy Swiss-Prot
Match: IF6_METS3 (Translation initiation factor 6 OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=eif6 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.535e-15 Identity = 58/215 (26.98%), Postives = 100/215 (46.51%), Query Frame = 1 Query: 67 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELVDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 711 M R+ ++ +GVF T+ +V + E L + VK+SI G +IG L V N NG+++ D+E++ + V I +A+GN +A ND A+ L E ++I D L V V ++ G+ ++GS + +N+G L+ + + ++D + V GTV RG ++GA N A ++T E+ Sbjct: 1 MLRRINIVDNPNIGVFILATDDLAVVPYNLLDEKVKLIEETLE--VDAVKSSISGCNLIGSLAVANSNGIVVSPHVLDREVKQFEEL---GLNVATIPGNYTAVGNIVAANDTGAIVSPFLSDEAVKVIEDTLDVNVESTSMVGSDIIGSLITVTNKGFLMDKNATETEVDFARDVFGVEGDIGTVGRGISLVGACSLANSSGAIVAKESTGPEM 210 The following BLAST results are available for this feature:
BLAST of FC929915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929915 ID=FC929915; Name=FC929915; organism=Citrus clementina; type=EST; length=711bpback to top |