FC929920

Overview
NameFC929920
Unique NameFC929920
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_CLOTE (S-adenosylmethionine synthetase OS=Clostridium tetani GN=metK PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 4.132e-64
Identity = 125/230 (54.35%), Postives = 159/230 (69.13%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSK------RPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKT 725
            LFTSESV EGHPDK+CDQISDA+LDA LE+DP+ +VACET   T +V+V G ITT   V+  KIVR+T   IG+     G D+D C VL  I +QSPDIA GV   L        + + IGAGDQG MFGYA +ET E+MP++  +A +L  +L+EVRKNGT P+LRPDGKTQVTVEY +       +R+ T+++STQH   VT ++I  D+ EHVI  V+P E+LDE T
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILERDPNGRVACETSVTTGMVLVTGEITTNCYVDIPKIVRNTIEAIGYTRAKYGFDSDTCAVLTSISEQSPDIAMGVDESLESKQGGMDKEDVIGAGDQGMMFGYANNETSEYMPMAISIAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEYEDNKA----IRIDTIVVSTQHGPEVTREQIEKDIFEHVISKVVPVEFLDENT 229          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_CLOBJ (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=metK PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 4.132e-64
Identity = 126/230 (54.78%), Postives = 162/230 (70.43%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKT 725
            LFTSESV EGHPDK+CDQISDA+LDA L++DP+ +VACET   T +VMV G I+TK  V+  K+VR+T R IG+     G D + C V+  I++QS DIA GV   L  +  E      +GAGDQG MFG+AT+ET E+MP+   +A +L  +L+EVRKNGT P+LRPDGKTQVTVEY  ENG   PVR+  ++ISTQH   +  ++I  D+KEHVIK ++P E LDE T
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILDKDPNGRVACETAVTTGMVMVMGEISTKCYVDIPKLVRETIRGIGYDRAKYGFDCETCSVITSIDEQSVDIAMGVDEALESKKGEMDKLDAVGAGDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEY--ENGK--PVRIDAIVISTQHGPEIYLEQIEKDIKEHVIKVIVPSELLDENT 229          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_CALS8 (S-adenosylmethionine synthetase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=metK PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 4.132e-64
Identity = 129/232 (55.60%), Postives = 157/232 (67.67%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKR--------PEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKT 725
            LFTSESV EGHPDK+CDQISDA+LDA LE+DP ++VACE    T LV+V G ITTK  V+  KI RDT R IG+     G DAD C V+  I++QSPDIA GV   L  +         E IGAGDQG MFG+A DETP  MP+   LA +L  +L  VRK G  P+LRPDGKTQVTVEY ++     P+RV T+++STQH   VT+ +I AD+ EHVIKP+IP   LD+ T
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILEKDPYARVACEVAVTTGLVLVMGEITTKCYVDIPKIARDTIREIGYTRAKYGFDADTCAVITSIDEQSPDIAMGVDKALEAKLGEMTDDEIEAIGAGDQGMMFGFACDETPVLMPMPIYLAHKLARRLAYVRKGGILPYLRPDGKTQVTVEYEDDR----PIRVDTIVVSTQHSPEVTHAQIEADVIEHVIKPIIPEGMLDKNT 231          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_CLOBB (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=metK PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 5.397e-64
Identity = 127/230 (55.22%), Postives = 160/230 (69.57%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKT 725
            LFTSESV EGHPDK+CDQISDAILDA L +DP+++VACETCT T LVMV G I+T   V+  K+VR+T R IG+     G D D C V+  I++QS DIA GV   L  +       E +GAGDQG MFG+AT+ET  +MPL   +A +L  +LTEVRK+GT  +LRPDGKTQVTVEY N      P R+ T++ISTQH E V+ ++I  D+KE+VI  V+P E LD +T
Sbjct:    4 LFTSESVTEGHPDKMCDQISDAILDAILTKDPNARVACETCTTTGLVMVMGEISTNCYVDIPKVVRETVREIGYDRAKYGFDCDTCSVMTTIDEQSADIAMGVDEALESKKGQKDEVEAVGAGDQGMMFGFATNETDAYMPLPIYMAHKLSRRLTEVRKDGTLDYLRPDGKTQVTVEYENNK----PKRIDTIVISTQHGEEVSLEKIEKDIKEYVINAVVPTELLDSET 229          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_LACPL (S-adenosylmethionine synthetase OS=Lactobacillus plantarum GN=metK PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 7.049e-64
Identity = 128/233 (54.94%), Postives = 162/233 (69.53%), Query Frame = 3
Query:   45 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKT 725
            E  LFTSESV+EGHPDK+ DQISDAILDA L QDP ++VA ET   T LV+VFG ++TKA V+ +K+VRDT ++IG+V    G D DNC VLV +++QSPDIAQGV   L  R       ++IGAGDQG MFGYA +ETPE MPL   L+ +L  K+  +RK+GT  WLRPD K QVTVEY  +N    P R+ TV++STQHD  V  D I   + + VIK V+P + LD++T
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDAMLAQDPQARVAVETSVTTGLVLVFGEVSTKAYVDIQKVVRDTIKSIGYVDGQYGFDGDNCAVLVSLDEQSPDIAQGVDDSLETRSGDADPLDQIGAGDQGMMFGYAINETPELMPLPIALSHRLMRKIAALRKDGTIKWLRPDAKAQVTVEYDEDN---QPKRIDTVVLSTQHDPDVDLDTIRQTVIDQVIKAVLPADLLDDQT 232          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_LACBA (S-adenosylmethionine synthetase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=metK PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 7.049e-64
Identity = 130/233 (55.79%), Postives = 160/233 (68.67%), Query Frame = 3
Query:   45 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKT 725
            E  LFTSESV+EGHPDK+ DQISDAILDA L QDPDS+VACET   T LV+VFG I+TKA V+ +K+VR T + IG+     G D DNC VLV I++QSPDIAQGV   L  R       ++IGAGDQG MFGYA +ETPE MPL   L+  L  ++  +RK     +LRPD K +VTVEY + +    P+RV TV++STQHD  VT D I  D+ E VIKP IP + LD++T
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDALLAQDPDSRVACETSVTTGLVLVFGEISTKAYVDIQKVVRQTIKEIGYTDGQYGFDGDNCAVLVAIDEQSPDIAQGVDDSLETREGDADPLDQIGAGDQGLMFGYAVNETPELMPLPIELSHALMRRIAMLRKQAVLDYLRPDAKAEVTVEYDDND---QPLRVDTVVLSTQHDPDVTLDRIRQDVIEQVIKPTIPADLLDDQT 232          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_CLOBK (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Okra / Type B1) GN=metK PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 7.049e-64
Identity = 127/230 (55.22%), Postives = 162/230 (70.43%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKT 725
            LFTSESV EGHPDK+CDQISDA+LDA L++DP+ +VACET   T +VMV G I+TK  V+  K+VR+T R IG+     G D + C V+  I++QS DIA GV   L  +  E      +GAGDQG MFG+AT+ET E+MP+   +A +L  +L+EVRKNGT P+LRPDGKTQVTVEY  ENG   PVR+  ++ISTQH   V  ++I  D+KEHVIK ++P E LDE T
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILDKDPNGRVACETAVTTGMVMVMGEISTKCYVDIPKLVRETIRGIGYDRAKYGFDCETCSVITSIDEQSVDIAIGVDEALESKKGEMDKLDAVGAGDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEY--ENGK--PVRIDAIVISTQHGPEVYLEQIEKDIKEHVIKVIVPSELLDENT 229          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_BACP2 (S-adenosylmethionine synthetase OS=Bacillus pumilus (strain SAFR-032) GN=metK PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 7.049e-64
Identity = 131/232 (56.47%), Postives = 162/232 (69.83%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKT 725
            LFTSESV EGHPDK+CDQISD+ILD  L++DP+++VACET   T LV+V G ITT   V+  K VRDT + IG+     G DA+ C VL  I++QS DIAQGV   L  R         + IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRK+ T  +LRPDGKTQVTVEY ++N    PVR+ TV+ISTQH   VT ++I +DLKEHVI PV+P E +DE+T
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDEILKKDPNARVACETSVTTGLVLVSGEITTSTYVDIPKTVRDTIKEIGYTRAKYGFDAETCAVLTSIDEQSADIAQGVDKALEAREGTMTEEELDAIGAGDQGLMFGFANNETEELMPLPISLAHKLSLRLTEVRKDQTLAYLRPDGKTQVTVEYDDQN---KPVRIDTVVISTQHAPEVTLEQIQSDLKEHVISPVVPSELIDEQT 235          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_CLOPH (S-adenosylmethionine synthetase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=metK PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 9.206e-64
Identity = 131/234 (55.98%), Postives = 165/234 (70.51%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE--------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            LFTSESV EGHPDK+CDQISDA+LDA LEQDP S+VACET   T LV+V G ITT   V+ +KIVRDT + IG+     G DAD C V+V +++QS DIA GV   L  +  E        IGAGDQG MFGYA++ET E MP    LA +L  +L++VRK+GT  +LRPDGK+QVTVE YNE G   PV ++ V++STQHD  VT ++I  D+K++V +PV+P E +DEKT F
Sbjct:    6 LFTSESVTEGHPDKICDQISDAVLDALLEQDPMSRVACETAITTGLVLVMGEITTSGYVDIQKIVRDTVKEIGYDRAKYGFDADTCGVIVALDEQSKDIALGVDKALEAKQNEMTDEAIEAIGAGDQGMMFGYASNETEELMPYPISLAHKLTKQLSKVRKDGTLSYLRPDGKSQVTVE-YNEEGK--PVHLNAVVLSTQHDPDVTQEQIHEDIKKYVFEPVLPKEMVDEKTKF 236          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_CLOCE (S-adenosylmethionine synthetase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=metK PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 9.206e-64
Identity = 131/232 (56.47%), Postives = 160/232 (68.97%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVH-------GHLS-KRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKT 725
            LFTSESV EGHPDK+CDQISDA+LDA  E+DP ++VACET   T +VMV G ITT   V+  K+VR+T R IG+     G D D C V+  I++QS DIA GV        G +S ++ + IGAGDQG MFG+A DETPE MP+  +LA +L  KL+EVRKNG   +LRPDGK+QVTVEY  +     PVRV TV+ISTQH   V++D I  D+ EHVI PVIP E LDE T
Sbjct:    5 LFTSESVTEGHPDKICDQISDAVLDAIYEKDPQARVACETAVTTGMVMVMGEITTNCYVDIPKVVRNTIREIGYDRAKYGFDCDTCAVMTSIDEQSSDIAMGVDKALEAKVGEMSEEQVQAIGAGDQGMMFGFACDETPELMPMPIILAHKLTMKLSEVRKNGKVKYLRPDGKSQVTVEYDGDK----PVRVDTVVISTQHGADVSHDTIEKDIMEHVIIPVIPRELLDEGT 232          
The following BLAST results are available for this feature:
BLAST of FC929920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CLOTE4.132e-6454.35S-adenosylmethionine synthetase OS=Clostridium tet... [more]
METK_CLOBJ4.132e-6454.78S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CALS84.132e-6455.60S-adenosylmethionine synthetase OS=Caldicellulosir... [more]
METK_CLOBB5.397e-6455.22S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_LACPL7.049e-6454.94S-adenosylmethionine synthetase OS=Lactobacillus p... [more]
METK_LACBA7.049e-6455.79S-adenosylmethionine synthetase OS=Lactobacillus b... [more]
METK_CLOBK7.049e-6455.22S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_BACP27.049e-6456.47S-adenosylmethionine synthetase OS=Bacillus pumilu... [more]
METK_CLOPH9.206e-6455.98S-adenosylmethionine synthetase OS=Clostridium phy... [more]
METK_CLOCE9.206e-6456.47S-adenosylmethionine synthetase OS=Clostridium cel... [more]

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Properties
Property NameValue
Genbank descriptionC34001H03EF PostHarvC1 Citrus clementina cDNA clone C34001H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929920 ID=FC929920; Name=FC929920; organism=Citrus clementina; type=EST; length=733bp
GAATTCTAGATCTACCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACT
TTTTTGTTCACTTCAGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTG
TGATCAGATCTCCGATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAG
ATAGCAAGGTGGCTTGTGAAACCTGTACCAAGACTAACTTGGTTATGGTT
TTTGGAGGGATCACAACCAAAGCTAATGTTAATTACGAGAAAATTGTTCG
TGACACTTGCCGCAACATTGGATTTGTCTCTGATGATGTGGGTTTGGATG
CTGATAACTGTAAGGTTTTGGTTTACATTGAGCAACAAAGCCCTGATATC
GCCCAGGGCGTTCATGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGC
TGGTGATCAGGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAAT
TTATGCCTCTGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACC
GAGGTTCGAAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGAC
ACAAGTTACTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGA
GAGTTCACACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAAT
GATGAGATCGCTGCTGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCC
CTGAGAGTACCTTGATGAGAAGACTATCTTCCA
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