FC929920

Overview
NameFC929920
Unique NameFC929920
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_CLOBA (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=metK PE=3 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.051e-63
Identity = 127/230 (55.22%), Postives = 158/230 (68.70%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKT 725
            LFTSESV EGHPDK+CDQISDAILDA L +D +++VACETCT T LVMV G I+T   V+  K+VR+T R IG+     G D D C V+  I++QS DIA GV   L  +       E +GAGDQG MFG+AT+ET  +MPL   +A +L  +LTEVRK+GT  +LRPDGKTQVTVEY N      P R+ T++ISTQH E V+ + I  D+KEHVI  V+P E LD +T
Sbjct:    4 LFTSESVTEGHPDKMCDQISDAILDAILAKDSNARVACETCTTTGLVMVMGEISTNCYVDIPKVVRETVREIGYDRAKYGFDCDTCSVMTTIDEQSADIAMGVDEALESKKGQKDEVEAVGAGDQGMMFGFATNETDAYMPLPIYMAHKLSRRLTEVRKDGTLDYLRPDGKTQVTVEYENNK----PKRIDTIVISTQHGEEVSLETIEKDIKEHVINAVVPAELLDAET 229          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_BACSK (S-adenosylmethionine synthetase OS=Bacillus clausii (strain KSM-K16) GN=metK PE=3 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.051e-63
Identity = 131/232 (56.47%), Postives = 162/232 (69.83%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKT 725
            LFTSESV EGHPDK+CDQISDAILD  L++DP+++VACET   T LV+V G ITT   V+   +VR T + IG+     G DA+ C VL  I++QS DIAQGV   L  R         E IGAGDQG MFG+AT+ET E MPL   L+ +L  +LTEVRKNGT  +LRPDGKTQVT+E Y+EN    PVRV T+++STQH   VT ++I ADLKEHVI+ V+P   +DE+T
Sbjct:    9 LFTSESVTEGHPDKICDQISDAILDEILKKDPNARVACETSVTTGLVLVAGEITTNTYVDIPSVVRQTIKGIGYTRAKYGFDAETCAVLTSIDEQSADIAQGVDKALEAREGQMTDAEIEAIGAGDQGLMFGFATNETEELMPLPISLSHKLSRRLTEVRKNGTLGYLRPDGKTQVTIE-YDEND--TPVRVDTIVLSTQHAPEVTLEQIQADLKEHVIEAVVPSALIDEET 237          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_BACHK (S-adenosylmethionine synthetase OS=Bacillus thuringiensis subsp. konkukian GN=metK PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.498e-63
Identity = 135/234 (57.69%), Postives = 161/234 (68.80%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            LFTSESV EGHPDK+CDQISD+ILDA L +D +++VACET   T LV+V G ITT   V+  KIVR+T + IG+     G DA+ C VL  I++QS DIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRKN T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P E +D +T F
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDAILSKDANARVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKNDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKF 237          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_BACCZ (S-adenosylmethionine synthetase OS=Bacillus cereus (strain ZK / E33L) GN=metK PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.498e-63
Identity = 135/234 (57.69%), Postives = 161/234 (68.80%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            LFTSESV EGHPDK+CDQISD+ILDA L +D +++VACET   T LV+V G ITT   V+  KIVR+T + IG+     G DA+ C VL  I++QS DIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRKN T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P E +D +T F
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDAILSKDANARVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKNDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKF 237          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_BACCQ (S-adenosylmethionine synthetase OS=Bacillus cereus (strain Q1) GN=metK PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.498e-63
Identity = 135/234 (57.69%), Postives = 161/234 (68.80%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            LFTSESV EGHPDK+CDQISD+ILDA L +D +++VACET   T LV+V G ITT   V+  KIVR+T + IG+     G DA+ C VL  I++QS DIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRKN T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P E +D +T F
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDAILSKDANARVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKNDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKF 237          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_BACC7 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain AH187) GN=metK PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.498e-63
Identity = 135/234 (57.69%), Postives = 161/234 (68.80%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            LFTSESV EGHPDK+CDQISD+ILDA L +D +++VACET   T LV+V G ITT   V+  KIVR+T + IG+     G DA+ C VL  I++QS DIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRKN T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P E +D +T F
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDAILSKDANARVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKNDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKF 237          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_BACC3 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain 03BB102) GN=metK PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.498e-63
Identity = 135/234 (57.69%), Postives = 161/234 (68.80%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            LFTSESV EGHPDK+CDQISD+ILDA L +D +++VACET   T LV+V G ITT   V+  KIVR+T + IG+     G DA+ C VL  I++QS DIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRKN T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P E +D +T F
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDAILSKDANARVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKNDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKF 237          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_BACC0 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain AH820) GN=metK PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.498e-63
Identity = 135/234 (57.69%), Postives = 161/234 (68.80%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            LFTSESV EGHPDK+CDQISD+ILDA L +D +++VACET   T LV+V G ITT   V+  KIVR+T + IG+     G DA+ C VL  I++QS DIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRKN T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P E +D +T F
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDAILSKDANARVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKNDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKF 237          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_BACAN (S-adenosylmethionine synthetase OS=Bacillus anthracis GN=metK PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.498e-63
Identity = 135/234 (57.69%), Postives = 161/234 (68.80%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            LFTSESV EGHPDK+CDQISD+ILDA L +D +++VACET   T LV+V G ITT   V+  KIVR+T + IG+     G DA+ C VL  I++QS DIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRKN T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P E +D +T F
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDAILSKDANARVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKNDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKF 237          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_BACAH (S-adenosylmethionine synthetase OS=Bacillus thuringiensis (strain Al Hakam) GN=metK PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.498e-63
Identity = 135/234 (57.69%), Postives = 161/234 (68.80%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            LFTSESV EGHPDK+CDQISD+ILDA L +D +++VACET   T LV+V G ITT   V+  KIVR+T + IG+     G DA+ C VL  I++QS DIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRKN T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P E +D +T F
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDAILSKDANARVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKNDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKF 237          
The following BLAST results are available for this feature:
BLAST of FC929920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CLOBA2.051e-6355.22S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_BACSK2.051e-6356.47S-adenosylmethionine synthetase OS=Bacillus clausi... [more]
METK_BACHK3.498e-6357.69S-adenosylmethionine synthetase OS=Bacillus thurin... [more]
METK_BACCZ3.498e-6357.69S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACCQ3.498e-6357.69S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC73.498e-6357.69S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC33.498e-6357.69S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC03.498e-6357.69S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACAN3.498e-6357.69S-adenosylmethionine synthetase OS=Bacillus anthra... [more]
METK_BACAH3.498e-6357.69S-adenosylmethionine synthetase OS=Bacillus thurin... [more]

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Properties
Property NameValue
Genbank descriptionC34001H03EF PostHarvC1 Citrus clementina cDNA clone C34001H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929920 ID=FC929920; Name=FC929920; organism=Citrus clementina; type=EST; length=733bp
GAATTCTAGATCTACCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACT
TTTTTGTTCACTTCAGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTG
TGATCAGATCTCCGATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAG
ATAGCAAGGTGGCTTGTGAAACCTGTACCAAGACTAACTTGGTTATGGTT
TTTGGAGGGATCACAACCAAAGCTAATGTTAATTACGAGAAAATTGTTCG
TGACACTTGCCGCAACATTGGATTTGTCTCTGATGATGTGGGTTTGGATG
CTGATAACTGTAAGGTTTTGGTTTACATTGAGCAACAAAGCCCTGATATC
GCCCAGGGCGTTCATGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGC
TGGTGATCAGGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAAT
TTATGCCTCTGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACC
GAGGTTCGAAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGAC
ACAAGTTACTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGA
GAGTTCACACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAAT
GATGAGATCGCTGCTGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCC
CTGAGAGTACCTTGATGAGAAGACTATCTTCCA
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