FC929920

Overview
NameFC929920
Unique NameFC929920
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_THESQ (S-adenosylmethionine synthetase OS=Thermotoga sp. (strain RQ2) GN=metK PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.962e-62
Identity = 129/231 (55.84%), Postives = 154/231 (66.67%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEK 722
            LFTSESV EGHPDK+ DQISDAILDA LEQDP S+VA ET   T LV++ G +TT+A V    I R T   IG+     G D + C VL  I  QSPDIA GV   L  +         E +GAGDQG MFGYAT+ETPE+MPL   LA +L  +L EVRKNGT P+LRPDGKTQVT+EY ++     PVRV TVLISTQHD  ++  ++   + EHVI PVIP +Y D+K
Sbjct:    4 LFTSESVTEGHPDKIADQISDAILDAMLEQDPRSRVAVETLVTTGLVIIAGEVTTRAYVEIPDIARKTILEIGYTRAKYGFDGETCGVLTSIHSQSPDIALGVDKALEVKTGEEVADEFEALGAGDQGIMFGYATNETPEYMPLPITLAHKLAMRLAEVRKNGTLPFLRPDGKTQVTIEYEDDK----PVRVDTVLISTQHDPDISQADLREAIIEHVINPVIPEQYRDDK 230          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_THEP1 (S-adenosylmethionine synthetase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=metK PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.962e-62
Identity = 129/231 (55.84%), Postives = 154/231 (66.67%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEK 722
            LFTSESV EGHPDK+ DQISDAILDA LEQDP S+VA ET   T LV++ G +TT+A V    I R T   IG+     G D + C VL  I  QSPDIA GV   L  +         E +GAGDQG MFGYAT+ETPE+MPL   LA +L  +L EVRKNGT P+LRPDGKTQVT+EY ++     PVRV TVLISTQHD  ++  ++   + EHVI PVIP +Y D+K
Sbjct:    4 LFTSESVTEGHPDKIADQISDAILDAMLEQDPRSRVAVETLVTTGLVIIAGEVTTRAYVEIPDIARKTILEIGYTRAKYGFDGETCGVLTSIHSQSPDIALGVDKALEVKTGEEVADEFEALGAGDQGIMFGYATNETPEYMPLPITLAHKLAMRLAEVRKNGTLPFLRPDGKTQVTIEYEDDK----PVRVDTVLISTQHDPDISQADLREAIIEHVINPVIPEQYRDDK 230          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_THEMA (S-adenosylmethionine synthetase OS=Thermotoga maritima GN=metK PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.962e-62
Identity = 129/231 (55.84%), Postives = 154/231 (66.67%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEK 722
            LFTSESV EGHPDK+ DQISDAILDA LEQDP S+VA ET   T LV++ G +TT+A V    I R T   IG+     G D + C VL  I  QSPDIA GV   L  +         E +GAGDQG MFGYAT+ETPE+MPL   LA +L  +L EVRKNGT P+LRPDGKTQVT+EY ++     PVRV TVLISTQHD  ++  ++   + EHVI PVIP +Y D+K
Sbjct:    4 LFTSESVTEGHPDKIADQISDAILDAMLEQDPRSRVAVETLVTTGLVIIAGEVTTRAYVEIPDIARKTILEIGYTRAKYGFDGETCGVLTSIHSQSPDIALGVDKALEVKTGEEVADEFEALGAGDQGIMFGYATNETPEYMPLPITLAHKLAMRLAEVRKNGTLPFLRPDGKTQVTIEYEDDK----PVRVDTVLISTQHDPDISQADLREAIIEHVINPVIPEQYRDDK 230          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_ENTFA (S-adenosylmethionine synthetase OS=Enterococcus faecalis GN=metK PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.868e-62
Identity = 127/231 (54.98%), Postives = 162/231 (70.13%), Query Frame = 3
Query:   45 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKR----PEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKT 725
            E  LFTSESV+EGHPDK+ DQ+SDAILDA LE+DP ++VACET   T LV+VFG I+T A V+ +KIVR T ++IG+     G D +   VLV I++QSPDIAQGV   L  R     ++IGAGDQG MFG+A DETPE MPL   L+ +L  +L E+RK    P+LRPD K+QVTVEY ++     P RV T++ISTQHD+  T ++I  D+KE VI  VIP E LD++T
Sbjct:    3 ERHLFTSESVSEGHPDKVADQVSDAILDAILEKDPMARVACETSVTTGLVLVFGEISTTAYVDIQKIVRQTVKDIGYTRAKYGFDGETVAVLVAIDEQSPDIAQGVDAALEVRDQDEKDDIGAGDQGLMFGFAVDETPELMPLPIALSHRLVRRLAELRKEKVLPYLRPDAKSQVTVEYDDQG---QPQRVDTIVISTQHDDETTLEQIEKDIKEQVINEVIPHELLDDET 230          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_BACLD (S-adenosylmethionine synthetase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=metK PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.868e-62
Identity = 126/232 (54.31%), Postives = 157/232 (67.67%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKT 725
            LFTSESV EGHPDK+CDQISD+ILD  L++DP+++VACET   T LV+V G ITT   V+  K VR+T + IG+     G DA+ C VL  I++QSPDIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRK    P+LRPDGKTQVTVEY   N    P+R+ T++ISTQH   ++ ++I  +LKEHVI PV+P E +DE T
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDEILKKDPNARVACETSVTTGLVLVSGEITTSTYVDIPKTVRETIKEIGYTRAKYGFDAETCAVLTSIDEQSPDIAMGVDQALEAREGAMSDAEIEAIGAGDQGLMFGFACNETKELMPLPISLAHKLSRRLTEVRKEEILPYLRPDGKTQVTVEYDENN---KPIRIDTIVISTQHHPEISLEQIQRNLKEHVINPVVPKELIDENT 235          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_THEP3 (S-adenosylmethionine synthetase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=metK PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 5.052e-62
Identity = 127/232 (54.74%), Postives = 157/232 (67.67%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGV-------HGHLS-KRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKT 725
            LFTSESV EGHPDK+CDQISDAILD  L++DP ++VACET   T LV+V G ITT+  V+  K+VR     IG+     G DAD C V+  I++QSPDIA GV        G LS    E IGAGDQG MFG+A DET E MP+  +LA +L  +L EVRKNGT  +LRPDGKTQVTVEY ++     PVRV +V++S QH   + +D I  D+ EHVIKP+IP   +D+KT
Sbjct:    4 LFTSESVTEGHPDKICDQISDAILDEILKKDPYARVACETAVTTGLVLVMGEITTQCYVDIPKVVRKVVEEIGYTRAKFGFDADTCAVITSIDEQSPDIALGVDKALEAKRGELSDSEIEAIGAGDQGLMFGFACDETEELMPMPIMLAHKLARRLAEVRKNGTLSYLRPDGKTQVTVEYEDDK----PVRVDSVVVSAQHAPEIDHDTIERDIIEHVIKPIIPENMIDDKT 231          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_THEAB (S-adenosylmethionine synthetase OS=Thermosipho africanus (strain TCF52B) GN=metK PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.598e-62
Identity = 132/232 (56.90%), Postives = 159/232 (68.53%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP---------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEK 722
            LFTSESV EGHPDK+ DQISDAILDA LEQDP S+VA ET   T + +V G +TT+A V+ + IVR T  +IG+     G D + C VL  I  QSPDIA GV   L  +          E++GAGDQG MFGYAT+ET E+MPL  +L+ +L  KL+EVRKNGT P+LRPDGKTQVT+E Y+EN    PVRV TVLISTQH+  VT  EI   L +HVI P+IP E  D+K
Sbjct:    4 LFTSESVTEGHPDKVADQISDAILDAMLEQDPKSRVAVETLVTTGIAIVSGEVTTRAYVDIQDIVRKTILDIGYTRAKYGFDGETCAVLSSIHSQSPDIALGVDKALEAKEGELIAEDELEQVGAGDQGMMFGYATNETKEYMPLPIMLSHKLAMKLSEVRKNGTLPFLRPDGKTQVTIE-YDENDK--PVRVDTVLISTQHEPDVTISEIKEALIKHVIDPIIPEELRDDK 232          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_LACS1 (S-adenosylmethionine synthetase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=metK PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.598e-62
Identity = 123/233 (52.79%), Postives = 162/233 (69.53%), Query Frame = 3
Query:   45 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKT 725
            E  LFTSESV+EGHPDK+ DQISD+ILDA LEQDP+++VA ET   T LV+V G ++T A+++ +K+VR+T + IG+ +   G D DNC V+  I++QSPDIA GV   L  +       ++IGAGDQG MFGYA +ETPE MPL   L+  L  K+ EVRKNGT  +L PD K QVTVEY + N    P+R+ TV++STQHDE ++ D+I  D+ + VI  VIP +YLD  T
Sbjct:    3 EKHLFTSESVSEGHPDKIADQISDSILDAMLEQDPEARVAVETTVTTGLVVVVGEVSTTAHIDIQKVVRETIKEIGYKNGKYGFDGDNCAVITAIDEQSPDIALGVDNSLEVKNGDVDPLDQIGAGDQGMMFGYAINETPELMPLPISLSHHLMKKVAEVRKNGTLAYLGPDAKAQVTVEYDDNN---QPLRIDTVVLSTQHDENISLDQIRKDVMDQVITKVIPDKYLDSNT 232          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_THENN (S-adenosylmethionine synthetase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=metK PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 8.617e-62
Identity = 130/231 (56.28%), Postives = 153/231 (66.23%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEK 722
            LFTSESV EGHPDK+ DQISDAILDA LEQDP S+VA ET   T LV+V G +TT+A V    IVR T   IG+     G D + C VL  I  QSPDIA GV   L  +         E +GAGDQG MFGYAT+ETPE+MPL   LA +L  +L EVRK G  P+LRPDGKTQVT+EY ++     PVRV TVLISTQHD  ++  ++   + EHVI PVIP EY D+K
Sbjct:    4 LFTSESVTEGHPDKVADQISDAILDAMLEQDPKSRVAVETLVTTGLVIVAGEVTTRAYVEIPDIVRKTILEIGYTRAKYGFDGETCGVLTSIHSQSPDIALGVDKALEVKSGEEVADELEALGAGDQGIMFGYATNETPEYMPLPITLAHRLAMRLAEVRKKGILPFLRPDGKTQVTIEYEDDK----PVRVDTVLISTQHDPDISQADLREAIIEHVINPVIPEEYRDDK 230          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_BACA2 (S-adenosylmethionine synthetase OS=Bacillus amyloliquefaciens (strain FZB42) GN=metK PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.507e-61
Identity = 126/232 (54.31%), Postives = 155/232 (66.81%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKT 725
            LFTSESV EGHPDK+CDQISD+ILD  L+ DP+++VACET   T LV+V G ITT   V+  K VR+T + IG+     G DA+ C VL  I++QS DIA GV   L  R         E IGAGDQG MFGYA +ET E MPL   LA +L  +L+EVRK    P+LRPDGKTQVTVEY   N    PVR+  ++ISTQH   +T ++I  +LKEHVI PV+P E +DE+T
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDEILKNDPNARVACETSVTTGLVLVSGEITTSTYVDIPKTVRETIKEIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGTMSDAEIEAIGAGDQGLMFGYACNETKELMPLPISLAHKLARRLSEVRKEDILPYLRPDGKTQVTVEYDENN---KPVRIDAIVISTQHHPEITLEQIQRNLKEHVINPVVPEELIDEET 235          
The following BLAST results are available for this feature:
BLAST of FC929920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_THESQ2.962e-6255.84S-adenosylmethionine synthetase OS=Thermotoga sp. ... [more]
METK_THEP12.962e-6255.84S-adenosylmethionine synthetase OS=Thermotoga petr... [more]
METK_THEMA2.962e-6255.84S-adenosylmethionine synthetase OS=Thermotoga mari... [more]
METK_ENTFA3.868e-6254.98S-adenosylmethionine synthetase OS=Enterococcus fa... [more]
METK_BACLD3.868e-6254.31S-adenosylmethionine synthetase OS=Bacillus lichen... [more]
METK_THEP35.052e-6254.74S-adenosylmethionine synthetase OS=Thermoanaerobac... [more]
METK_THEAB6.598e-6256.90S-adenosylmethionine synthetase OS=Thermosipho afr... [more]
METK_LACS16.598e-6252.79S-adenosylmethionine synthetase OS=Lactobacillus s... [more]
METK_THENN8.617e-6256.28S-adenosylmethionine synthetase OS=Thermotoga neap... [more]
METK_BACA22.507e-6154.31S-adenosylmethionine synthetase OS=Bacillus amylol... [more]

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Properties
Property NameValue
Genbank descriptionC34001H03EF PostHarvC1 Citrus clementina cDNA clone C34001H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929920 ID=FC929920; Name=FC929920; organism=Citrus clementina; type=EST; length=733bp
GAATTCTAGATCTACCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACT
TTTTTGTTCACTTCAGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTG
TGATCAGATCTCCGATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAG
ATAGCAAGGTGGCTTGTGAAACCTGTACCAAGACTAACTTGGTTATGGTT
TTTGGAGGGATCACAACCAAAGCTAATGTTAATTACGAGAAAATTGTTCG
TGACACTTGCCGCAACATTGGATTTGTCTCTGATGATGTGGGTTTGGATG
CTGATAACTGTAAGGTTTTGGTTTACATTGAGCAACAAAGCCCTGATATC
GCCCAGGGCGTTCATGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGC
TGGTGATCAGGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAAT
TTATGCCTCTGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACC
GAGGTTCGAAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGAC
ACAAGTTACTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGA
GAGTTCACACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAAT
GATGAGATCGCTGCTGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCC
CTGAGAGTACCTTGATGAGAAGACTATCTTCCA
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