FC929920

Overview
NameFC929920
Unique NameFC929920
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_ACIBC (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain ACICU) GN=metK PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.685e-55
Identity = 115/229 (50.22%), Postives = 151/229 (65.94%), Query Frame = 3
Query:   45 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            E  +FTSESV+EGHPDK+ DQISDAILDA L++DP ++VACET  KT  V++ G ITT AN++ E +VR T   IG+   D+G D   C V+  I +QSP+IAQGV     ++PE+ GAGDQG MFGYA+ ET   MP     A +L  +  E+R++G  PWLRPD K+QVT  Y  ENG   PVR+  V++STQHD  +T  ++   + E +IKP+IP E     T F
Sbjct:    3 EYAVFTSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAVVLAGEITTTANIDVEAVVRQTVNGIGYHHSDLGFDGSTCAVINMIGKQSPEIAQGVD---RQKPEDQGAGDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAY--ENGK--PVRLDAVVLSTQHDPEITQTQLKEAVIEEIIKPIIPAEMFHAATKF 224          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_LACLM (S-adenosylmethionine synthetase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=metK PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.506e-55
Identity = 123/236 (52.12%), Postives = 155/236 (65.68%), Query Frame = 3
Query:   45 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGV---------HGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKT 725
            E  LFTSESV+EGHPDK+ DQISDAILDA L QDP + VACET   T  V VFG I+T A V+   +VR+T + IG+   + G D  +  V V + +QS DIAQGV         +G L    + IGAGDQG MFG+AT+ET E+MPL+  L+ +L  KL ++RK+G   +LRPD K+QVTVEY N   A    RV TV+ISTQH  T TN+EI  D+   VIK +IP E LD++T
Sbjct:    3 EKHLFTSESVSEGHPDKVADQISDAILDAILAQDPHAHVACETVVYTGTVNVFGEISTSAYVDIAHVVRETIKKIGYTDSENGFDYKSVGVHVSLVEQSSDIAQGVNEAEEVRDKNGQLVDPLDLIGAGDQGMMFGFATNETAEYMPLAISLSHKLVKKLADLRKSGEISYLRPDAKSQVTVEYDNNGKAK---RVDTVVISTQHAATATNEEIHDDVINKVIKAIIPAELLDDET 235          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_FINM2 (S-adenosylmethionine synthetase OS=Finegoldia magna (strain ATCC 29328) GN=metK PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.506e-55
Identity = 113/236 (47.88%), Postives = 151/236 (63.98%), Query Frame = 3
Query:   42 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGV------HGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            M+    TSESV EGHPDK+CDQISDAILDA +++D D++VACETC+ T LVMV G ITT + V+   IVR T   IG+ + D G+DA  C ++  +E+QS DIAQGV        + S   +  GAGDQG +FGYAT+ET   +PL   L+ +L  +L  VRK     +LRPDGKTQVTVEY N+     P R+  +++STQHD  V  +++  D+K  VI  ++    +DE T F
Sbjct:    1 MKNIFLTSESVTEGHPDKVCDQISDAILDAIIKEDKDARVACETCSTTGLVMVMGEITTTSYVDIRSIVRKTLAEIGYDNADYGIDARTCAIITSLEEQSKDIAQGVDESEEYKDNKSDEYDRYGAGDQGMVFGYATNETESGLPLPLELSHKLARRLATVRKEKILNYLRPDGKTQVTVEYEND----APKRIEAIVVSTQHDPDVDYEQLKEDIKREVILKIVDESMIDENTKF 232          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_STAHJ (S-adenosylmethionine synthetase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=metK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.580e-55
Identity = 114/233 (48.93%), Postives = 154/233 (66.09%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKR----PEEI---GAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            LFTSESV EGHPDK+ DQ+SDAILD  L+ DP+++VACET   T + ++ G I+T   V+  K+VR+T + IG+     G D     VL  I++QSPDIAQGV   L  R     EEI   GAGDQG MFGYAT+ET  +MPL   L+ QL  +L++VRK+G   +LRPDGK QVTVEY   +    P R+ T+++S+QH + +  ++I +D+KEHVI P +P   +D +T F
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDEILKDDPNARVACETTVTTGMALISGEISTSTYVDIPKVVRETIKGIGYTRAKYGYDYQTMAVLTAIDEQSPDIAQGVDKALEYRNDISEEEIEATGAGDQGLMFGYATNETETYMPLPIFLSHQLAKRLSDVRKDGILNYLRPDGKVQVTVEYDESD---KPKRIDTIVVSSQHADDIELEQIQSDIKEHVIYPTVPEGLIDNETKF 236          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_SHESR (S-adenosylmethionine synthetase OS=Shewanella sp. (strain MR-7) GN=metK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.580e-55
Identity = 114/228 (50.00%), Postives = 151/228 (66.23%), Query Frame = 3
Query:   42 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKT 725
            M   LFTSESV+EGHPDK+ DQISDA+LDA L QDP ++VACET  KT +V+V G +TT A V+ E++ R T R IG+V  D+G DAD+C VL  I +QSPDI QGV       P+E GAGDQG MFGYA++ET   MP     A  L  + +EVRK+GT PWLRPD K+QVT  Y +       V +  +++STQH   +   ++   + E +IKPV+P ++L++ T
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEELTRKTVREIGYVHSDMGFDADSCAVLNAIGKQSPDINQGVD---RADPKEQGAGDQGLMFGYASNETDILMPAPITYAHALVKRQSEVRKDGTLPWLRPDAKSQVTFAYEDNK----IVGIDAIVLSTQHSPDIAQADLIEGVMETIIKPVLPAQWLNKDT 221          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_SHESM (S-adenosylmethionine synthetase OS=Shewanella sp. (strain MR-4) GN=metK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.580e-55
Identity = 114/228 (50.00%), Postives = 151/228 (66.23%), Query Frame = 3
Query:   42 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKT 725
            M   LFTSESV+EGHPDK+ DQISDA+LDA L QDP ++VACET  KT +V+V G +TT A V+ E++ R T R IG+V  D+G DAD+C VL  I +QSPDI QGV       P+E GAGDQG MFGYA++ET   MP     A  L  + +EVRK+GT PWLRPD K+QVT  Y +       V +  +++STQH   +   ++   + E +IKPV+P ++L++ T
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEELTRKTVREIGYVHSDMGFDADSCAVLNAIGKQSPDINQGVD---RADPKEQGAGDQGLMFGYASNETDILMPAPITYAHALVKRQSEVRKDGTLPWLRPDAKSQVTFAYEDNK----IVGIDAIVLSTQHSPDIAQADLIEGVMETIIKPVLPAQWLNKDT 221          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_SHESA (S-adenosylmethionine synthetase OS=Shewanella sp. (strain ANA-3) GN=metK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.580e-55
Identity = 114/228 (50.00%), Postives = 151/228 (66.23%), Query Frame = 3
Query:   42 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKT 725
            M   LFTSESV+EGHPDK+ DQISDA+LDA L QDP ++VACET  KT +V+V G +TT A V+ E++ R T R IG+V  D+G DAD+C VL  I +QSPDI QGV       P+E GAGDQG MFGYA++ET   MP     A  L  + +EVRK+GT PWLRPD K+QVT  Y +       V +  +++STQH   +   ++   + E +IKPV+P ++L++ T
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEELTRKTVREIGYVHSDMGFDADSCAVLNAIGKQSPDINQGVD---RADPKEQGAGDQGLMFGYASNETDILMPAPITYAHALVKRQSEVRKDGTLPWLRPDAKSQVTFAYEDNK----IVGIDAIVLSTQHSPDIAQADLIEGVMETIIKPVLPAQWLNKDT 221          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_SHESH (S-adenosylmethionine synthetase OS=Shewanella sediminis (strain HAW-EB3) GN=metK PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.981e-55
Identity = 116/228 (50.88%), Postives = 151/228 (66.23%), Query Frame = 3
Query:   42 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKT 725
            M   LFTSESV+EGHPDK+ DQISDA+LDA LEQDP ++VACET  KT +VMV G +TT A V+ E+I R T R IG+   D+G DAD+C VL  I +QSPDI QGV       P+E GAGDQG MFGYA +ET   MP     A  L  + +EVRK  T PWLRPD K+QVT  Y +       V +  +++STQH ++V+  ++   + E +IKPV+P ++L++ T
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRKTVREIGYTHSDMGFDADSCAVLNAIGKQSPDINQGVD---RADPKEQGAGDQGLMFGYANNETELLMPAPITYAHALVKRQSEVRKAKTLPWLRPDAKSQVTFAYEDHK----IVGIDAIVLSTQHCDSVSQADLIEGVMETIIKPVLPAQWLNKDT 221          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_NOCSJ (S-adenosylmethionine synthetase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=metK PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.812e-55
Identity = 120/221 (54.30%), Postives = 150/221 (67.87%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVH-GHLSK-----RPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVI 698
            LFTSESV EGHPDK+ DQISD++LDA LE DP S+VA ET   T +V+V G +TT   V+ + +VR     IG+ S   G D  +C V+V I  QS DIAQGV  GH S+       ++ GAGDQG MFGYA D+T   MPL  V+A +L  +LT VRK+GT P+LRPDGKTQVT+EY  EN    PVRV TV++S+QHDE    D + AD+K+HVI PV+
Sbjct:    5 LFTSESVTEGHPDKIADQISDSVLDAMLELDPTSRVAVETLLTTGVVVVAGEVTTTGYVDVKDVVRRRIIEIGYDSSVKGFDGHSCGVMVAIGGQSGDIAQGVDTGHESRTGSVDAMDKQGAGDQGLMFGYACDDTDVLMPLPIVIAQRLAEQLTAVRKDGTLPYLRPDGKTQVTIEYDAENR---PVRVDTVVLSSQHDEDTELDTLEADVKKHVIDPVL 222          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_BIFAA (S-adenosylmethionine synthetase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=metK PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.812e-55
Identity = 119/227 (52.42%), Postives = 145/227 (63.88%), Query Frame = 3
Query:   45 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGV---------HGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVI 698
            E  L ++ESV EGHPDK+CDQISDAILD  L QDP S VA ETC       VFG +T++   + + IVR   RNIG+ S  VGLDAD+C V V + +QSP+I QGV              +R E  GAGDQG MFGYA DET   MPL   LA +L  +L EVRK+G  P LRPDGKTQVT+EY +++    PVR+ TVL+STQHD  V    +   L EHVI+PV+
Sbjct:    3 ELKLISAESVTEGHPDKVCDQISDAILDDMLAQDPHSHVAVETCATVGQFFVFGEVTSEGYSDIQNIVRSVVRNIGYTSSRVGLDADSCGVTVSLTEQSPEINQGVARLSGEEESKASREQRYEAQGAGDQGVMFGYACDETDVLMPLPIHLAHRLAYRLAEVRKSGEVPHLRPDGKTQVTIEYDDDDH---PVRLDTVLVSTQHDPEVDQAWLKEQLTEHVIRPVL 226          
The following BLAST results are available for this feature:
BLAST of FC929920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ACIBC2.685e-5550.22S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_LACLM3.506e-5552.12S-adenosylmethionine synthetase OS=Lactococcus lac... [more]
METK_FINM23.506e-5547.88S-adenosylmethionine synthetase OS=Finegoldia magn... [more]
METK_STAHJ4.580e-5548.93S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_SHESR4.580e-5550.00S-adenosylmethionine synthetase OS=Shewanella sp. ... [more]
METK_SHESM4.580e-5550.00S-adenosylmethionine synthetase OS=Shewanella sp. ... [more]
METK_SHESA4.580e-5550.00S-adenosylmethionine synthetase OS=Shewanella sp. ... [more]
METK_SHESH5.981e-5550.88S-adenosylmethionine synthetase OS=Shewanella sedi... [more]
METK_NOCSJ7.812e-5554.30S-adenosylmethionine synthetase OS=Nocardioides sp... [more]
METK_BIFAA7.812e-5552.42S-adenosylmethionine synthetase OS=Bifidobacterium... [more]

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Properties
Property NameValue
Genbank descriptionC34001H03EF PostHarvC1 Citrus clementina cDNA clone C34001H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929920 ID=FC929920; Name=FC929920; organism=Citrus clementina; type=EST; length=733bp
GAATTCTAGATCTACCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACT
TTTTTGTTCACTTCAGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTG
TGATCAGATCTCCGATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAG
ATAGCAAGGTGGCTTGTGAAACCTGTACCAAGACTAACTTGGTTATGGTT
TTTGGAGGGATCACAACCAAAGCTAATGTTAATTACGAGAAAATTGTTCG
TGACACTTGCCGCAACATTGGATTTGTCTCTGATGATGTGGGTTTGGATG
CTGATAACTGTAAGGTTTTGGTTTACATTGAGCAACAAAGCCCTGATATC
GCCCAGGGCGTTCATGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGC
TGGTGATCAGGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAAT
TTATGCCTCTGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACC
GAGGTTCGAAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGAC
ACAAGTTACTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGA
GAGTTCACACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAAT
GATGAGATCGCTGCTGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCC
CTGAGAGTACCTTGATGAGAAGACTATCTTCCA
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