FC929920

Overview
NameFC929920
Unique NameFC929920
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_PROM9 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9312) GN=metK PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.549e-53
Identity = 116/229 (50.66%), Postives = 154/229 (67.25%), Query Frame = 3
Query:   42 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDV-GLDADNCKVLVYIEQQSPDIAQGVH---GHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHD---ETVTNDE-----IAADLKEHVIKP 692
            M  F+FTSESV EGHPDK+CDQISDA+LDA L +DP+S+VACET   T L ++ G IT+KA V+Y K+VR+  + IG+      G DA++C VLV +++QSPDI+QGV+          +  GAGDQG MFGYA DETPE MPL   LA +L  +L +VR      +L PDGKTQV+++Y  E G  +PV ++T+LISTQH+   + +TN+E     I  DL  HV+ P
Sbjct:    1 MSDFIFTSESVTEGHPDKICDQISDAVLDALLTEDPESRVACETVVNTGLCLLTGEITSKAKVDYIKLVRNVIKEIGYEGYRAGGFDANSCAVLVALDEQSPDISQGVNYADDVNDDLEDNTGAGDQGIMFGYACDETPELMPLPISLAHRLAIQLAKVRHEEVLNYLLPDGKTQVSIDY--EKG--LPVSINTILISTQHNPEIDGITNEEEIRQRIKEDLWTHVVIP 225          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_XANOR (S-adenosylmethionine synthetase OS=Xanthomonas oryzae pv. oryzae GN=metK PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.247e-52
Identity = 116/234 (49.57%), Postives = 154/234 (65.81%), Query Frame = 3
Query:   42 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMP----LSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            M ++LFTSESV+EGHPDK+ DQISDA+LDA L QD  ++VACET  KT + +V G +TT A ++ E + R    +IG+ S DVG D + C VL  I +QSPDI QGV     K PE+ GAGDQG MFGYAT+ET  FMP    LSH L  Q  AK+ + +KN    WLRPD K+QVT+ Y  E+G  V   +  V++STQHD  V   ++   ++E ++KPV+P ++L + T F
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDAILAQDKRARVACETMVKTGVAIVAGEVTTSAWIDLEALTRKVILDIGYNSSDVGFDGETCGVLNLIGKQSPDINQGVD---RKNPEQQGAGDQGLMFGYATNETDSFMPAAIHLSHRLVEQ-QAKIRK-KKNSALSWLRPDAKSQVTLRY--EDG--VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKF 225          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_XANOP (S-adenosylmethionine synthetase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=metK PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.247e-52
Identity = 116/234 (49.57%), Postives = 154/234 (65.81%), Query Frame = 3
Query:   42 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMP----LSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            M ++LFTSESV+EGHPDK+ DQISDA+LDA L QD  ++VACET  KT + +V G +TT A ++ E + R    +IG+ S DVG D + C VL  I +QSPDI QGV     K PE+ GAGDQG MFGYAT+ET  FMP    LSH L  Q  AK+ + +KN    WLRPD K+QVT+ Y  E+G  V   +  V++STQHD  V   ++   ++E ++KPV+P ++L + T F
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDAILAQDKRARVACETMVKTGVAIVAGEVTTSAWIDLEALTRKVILDIGYNSSDVGFDGETCGVLNLIGKQSPDINQGVD---RKNPEQQGAGDQGLMFGYATNETDSFMPAAIHLSHRLVEQ-QAKIRK-KKNSALSWLRPDAKSQVTLRY--EDG--VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKF 225          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_XANOM (S-adenosylmethionine synthetase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=metK PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.247e-52
Identity = 116/234 (49.57%), Postives = 154/234 (65.81%), Query Frame = 3
Query:   42 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMP----LSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            M ++LFTSESV+EGHPDK+ DQISDA+LDA L QD  ++VACET  KT + +V G +TT A ++ E + R    +IG+ S DVG D + C VL  I +QSPDI QGV     K PE+ GAGDQG MFGYAT+ET  FMP    LSH L  Q  AK+ + +KN    WLRPD K+QVT+ Y  E+G  V   +  V++STQHD  V   ++   ++E ++KPV+P ++L + T F
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDAILAQDKRARVACETMVKTGVAIVAGEVTTSAWIDLEALTRKVILDIGYNSSDVGFDGETCGVLNLIGKQSPDINQGVD---RKNPEQQGAGDQGLMFGYATNETDSFMPAAIHLSHRLVEQ-QAKIRK-KKNSALSWLRPDAKSQVTLRY--EDG--VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKF 225          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_XANC5 (S-adenosylmethionine synthetase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=metK PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.247e-52
Identity = 116/234 (49.57%), Postives = 154/234 (65.81%), Query Frame = 3
Query:   42 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMP----LSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            M ++LFTSESV+EGHPDK+ DQISDA+LDA L QD  ++VACET  KT + +V G +TT A ++ E + R    +IG+ S DVG D + C VL  I +QSPDI QGV     K PE+ GAGDQG MFGYAT+ET  FMP    LSH L  Q  AK+ + +KN    WLRPD K+QVT+ Y  E+G  V   +  V++STQHD  V   ++   ++E ++KPV+P ++L + T F
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDAILAQDKRARVACETMVKTGVAIVAGEVTTSAWIDLEALTRKVILDIGYNSSDVGFDGETCGVLNLIGKQSPDINQGVD---RKNPEQQGAGDQGLMFGYATNETDSFMPAAIHLSHRLVEQ-QAKIRK-KKNSALSWLRPDAKSQVTLRY--EDG--VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKF 225          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_XANAC (S-adenosylmethionine synthetase OS=Xanthomonas axonopodis pv. citri GN=metK PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.247e-52
Identity = 116/234 (49.57%), Postives = 154/234 (65.81%), Query Frame = 3
Query:   42 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMP----LSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            M ++LFTSESV+EGHPDK+ DQISDA+LDA L QD  ++VACET  KT + +V G +TT A ++ E + R    +IG+ S DVG D + C VL  I +QSPDI QGV     K PE+ GAGDQG MFGYAT+ET  FMP    LSH L  Q  AK+ + +KN    WLRPD K+QVT+ Y  E+G  V   +  V++STQHD  V   ++   ++E ++KPV+P ++L + T F
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDAILAQDKRARVACETMVKTGVAIVAGEVTTSAWIDLEALTRKVILDIGYNSSDVGFDGETCGVLNLIGKQSPDINQGVD---RKNPEQQGAGDQGLMFGYATNETDSFMPAAIHLSHRLVEQ-QAKIRK-KKNSALSWLRPDAKSQVTLRY--EDG--VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKF 225          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_THICR (S-adenosylmethionine synthetase OS=Thiomicrospira crunogena (strain XCL-2) GN=metK PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.247e-52
Identity = 114/228 (50.00%), Postives = 149/228 (65.35%), Query Frame = 3
Query:   42 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKT 725
            M T +FTSESV+EGHPDK+ DQISDA+LDA ++QDP ++VACET  KT +VM+ G ITT A V+ E++VR    +IG+   D+G D + C VL  I +QSP+IAQGV  +      E GAGDQG MFGYA++ET   MP     A +L  K  E+RK G   WLRPD K+QVT+ Y  E+G   PV V  V++STQH   V N ++   + E +IKPV+P  +L   T
Sbjct:    1 MTTTVFTSESVSEGHPDKIADQISDAMLDAIMKQDPKARVACETFVKTGMVMLGGEITTSAWVDQEELVRQVVNDIGYNHGDLGFDGETCAVLSSIGKQSPEIAQGVDEY---EDHEQGAGDQGLMFGYASNETDVLMPAPIYFAHRLMEKQAELRKAGKLDWLRPDAKSQVTLRY--EDGQ--PVAVDAVVLSTQHSPEVDNKDLHEAVMEEIIKPVLPEGWLHSGT 221          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_RHOE4 (S-adenosylmethionine synthetase OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=metK PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.247e-52
Identity = 120/224 (53.57%), Postives = 147/224 (65.62%), Query Frame = 3
Query:   54 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGV-HGHLSK----RPEEI---GAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDE-IAADLKEHVIKPVI 698
            LFTSESV EGHPDK+CD ISD+ILDA L QDP ++VA ET   T  V V G +TT A  +  KIVRDT   IG+ S   G D ++C V V I  QSP+IAQGV H H ++      +EI   GAGDQG MFGYAT +TPE MPL   LA +L  +LTEVRK+G  P+LRPDGKTQVT+EY  +      VR+ TV+ISTQH   +  D  +  DL+E V+  V+
Sbjct:    8 LFTSESVTEGHPDKICDAISDSILDALLTQDPRARVAVETLVTTGQVHVAGEVTTTAYADIPKIVRDTVLEIGYDSSAKGFDGNSCGVNVAIGAQSPEIAQGVDHSHEARVDGISDDEIDRQGAGDQGLMFGYATTDTPELMPLPIALAHRLSRRLTEVRKSGVLPYLRPDGKTQVTIEYDGDKA----VRLDTVVISTQHAADIDLDNLLTPDLREKVLHSVL 227          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_POLSQ (S-adenosylmethionine synthetase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=metK PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.247e-52
Identity = 108/217 (49.77%), Postives = 149/217 (68.66%), Query Frame = 3
Query:   51 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 701
            + FTSESV+EGHPDK+ DQISDAILDA L QDP ++VA ET   T LV++ G ITT ANV+Y ++ R+T R IG+ + D G+D   C VLV  ++QSPDIAQGV        ++ GAGDQG MFGYA DET E MP+   L+ +L  + +++R++G   WLRPD K+QVT+ Y +      P  + TV++STQHDE ++ +++   + E +IKPV+P
Sbjct:    5 YFFTSESVSEGHPDKVADQISDAILDAILAQDPTARVAAETLCNTGLVVLAGEITTHANVDYIQVARNTLREIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDKAHDDGLDQ-GAGDQGLMFGYACDETSELMPMPIHLSHRLVERQSQLRRDGRLNWLRPDAKSQVTLRYVDGK----PDSIDTVVLSTQHDEEISLEKLREAVIEEIIKPVLP 216          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_POLNS (S-adenosylmethionine synthetase OS=Polynucleobacter necessarius (strain STIR1) GN=metK PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.247e-52
Identity = 108/217 (49.77%), Postives = 149/217 (68.66%), Query Frame = 3
Query:   51 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 701
            + FTSESV+EGHPDK+ DQISD+ILDA L QDP ++VA ET   T LV++ G ITT ANV+Y ++ R+T R IG+ + D G+D   C VLV  ++QSPDIAQGV        ++ GAGDQG MFGYA DET E MPL   L+ +L  + +++R++G   WLRPD K+QVT+ Y +      P  + TV++STQHDE ++ +++   + E +IKPV+P
Sbjct:    5 YFFTSESVSEGHPDKVADQISDSILDAILAQDPTARVAAETLCNTGLVVLAGEITTNANVDYIQVARNTLREIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDKAHDDGLDQ-GAGDQGLMFGYACDETAELMPLPIHLSHRLVERQSQLRRDGRLNWLRPDAKSQVTLRYVDGK----PDSIDTVVLSTQHDEDISLEKLREAVIEEIIKPVLP 216          
The following BLAST results are available for this feature:
BLAST of FC929920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_PROM99.549e-5350.66S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_XANOR1.247e-5249.57S-adenosylmethionine synthetase OS=Xanthomonas ory... [more]
METK_XANOP1.247e-5249.57S-adenosylmethionine synthetase OS=Xanthomonas ory... [more]
METK_XANOM1.247e-5249.57S-adenosylmethionine synthetase OS=Xanthomonas ory... [more]
METK_XANC51.247e-5249.57S-adenosylmethionine synthetase OS=Xanthomonas cam... [more]
METK_XANAC1.247e-5249.57S-adenosylmethionine synthetase OS=Xanthomonas axo... [more]
METK_THICR1.247e-5250.00S-adenosylmethionine synthetase OS=Thiomicrospira ... [more]
METK_RHOE41.247e-5253.57S-adenosylmethionine synthetase OS=Rhodococcus ery... [more]
METK_POLSQ1.247e-5249.77S-adenosylmethionine synthetase OS=Polynucleobacte... [more]
METK_POLNS1.247e-5249.77S-adenosylmethionine synthetase OS=Polynucleobacte... [more]

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Properties
Property NameValue
Genbank descriptionC34001H03EF PostHarvC1 Citrus clementina cDNA clone C34001H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929920 ID=FC929920; Name=FC929920; organism=Citrus clementina; type=EST; length=733bp
GAATTCTAGATCTACCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACT
TTTTTGTTCACTTCAGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTG
TGATCAGATCTCCGATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAG
ATAGCAAGGTGGCTTGTGAAACCTGTACCAAGACTAACTTGGTTATGGTT
TTTGGAGGGATCACAACCAAAGCTAATGTTAATTACGAGAAAATTGTTCG
TGACACTTGCCGCAACATTGGATTTGTCTCTGATGATGTGGGTTTGGATG
CTGATAACTGTAAGGTTTTGGTTTACATTGAGCAACAAAGCCCTGATATC
GCCCAGGGCGTTCATGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGC
TGGTGATCAGGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAAT
TTATGCCTCTGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACC
GAGGTTCGAAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGAC
ACAAGTTACTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGA
GAGTTCACACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAAT
GATGAGATCGCTGCTGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCC
CTGAGAGTACCTTGATGAGAAGACTATCTTCCA
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