FC929926

Overview
NameFC929926
Unique NameFC929926
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6173 contig Ccv1_Contig6173:28..767. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929926 vs. ExPASy Swiss-Prot
Match: ALF1_LAMJA (Fructose-bisphosphate aldolase, muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.110e-72
Identity = 139/215 (64.65%), Postives = 164/215 (76.28%), Query Frame = 3
Query:   99 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCT-PGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLSEGTLL 740
            EL   A  I   GKGILAADES GT+GKRL+ I +EN + +RR  R+LLF T P   +++ G+I F ET+YQKT  G PFV ++K+ G+L GIKVDKG V LAGTNGE TTQGLDGLA+RC +Y + GA FAKWR VLKI PN PS+L+I ENAN LARYA ICQ+NGLVPIVEPEIL DG HD+  C  +TE+VLAA YKAL+DHHV  EGTLL
Sbjct:   15 ELADIAQRIVASGKGILAADESVGTMGKRLTQIGLENTDEHRRFYRQLLFTTDPSIKEHIGGIIFFHETMYQKTDGGVPFVKLVKDNGILVGIKVDKGVVPLAGTNGEGTTQGLDGLAERCAQYKKDGADFAKWRCVLKISPNTPSRLSIVENANVLARYATICQQNGLVPIVEPEILPDGDHDLKTCQYITEKVLAATYKALSDHHVYLEGTLL 229          
BLAST of FC929926 vs. ExPASy Swiss-Prot
Match: ALDOB_CHICK (Fructose-bisphosphate aldolase B OS=Gallus gallus GN=ALDOB PE=3 SV=3)

HSP 1 Score: 271.552 bits (693), Expect = 3.230e-72
Identity = 139/210 (66.19%), Postives = 161/210 (76.67%), Query Frame = 3
Query:  114 AAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLSEGTLL 740
            A  I   GKGILAADES GT+G RL  INVEN E NRRA RE+LF +  ++ + + GVILF ETLYQK ++GKPF  ++KE G++ GIK+D GT  LAGTNGETT QGLD LA+RC +Y + GA F KWRAVLKI    PSQLAI ENAN LARYA ICQ+NGLVPIVEPE+L DG HD+ +C  VTE+VLAA YKALNDHHV  EGTLL
Sbjct:   20 AQRIVASGKGILAADESVGTMGNRLQRINVENTEENRRAFREILFSSDASISKSIGGVILFHETLYQKDSSGKPFPAIIKEKGMVVGIKLDAGTAPLAGTNGETTIQGLDKLAERCAQYKKDGADFGKWRAVLKISSTTPSQLAIQENANTLARYASICQQNGLVPIVEPEVLPDGDHDLQRCQYVTEKVLAAVYKALNDHHVYLEGTLL 229          
BLAST of FC929926 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 7.196e-72
Identity = 139/215 (64.65%), Postives = 163/215 (75.81%), Query Frame = 3
Query:   99 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLSEGTLL 740
            EL   A  I  PGKGILAADESTG++ KRL+ I VEN E NRR  R+LLF     + + + GVI F ETLYQK   G PF  ++K+ G++ GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR+VLKI    PS+LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+ +C  VTE+VLAACYKAL+DHHV  EGTLL
Sbjct:   15 ELQDIAQRIVAPGKGILAADESTGSMAKRLNPIGVENTEENRRLYRQLLFTADERMDKCIGGVIFFHETLYQKADDGTPFAKMIKDRGIVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRSVLKISETSPSELAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAACYKALSDHHVYLEGTLL 229          
BLAST of FC929926 vs. ExPASy Swiss-Prot
Match: ALDCB_DANRE (Fructose-bisphosphate aldolase C-B OS=Danio rerio GN=aldocb PE=2 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 7.956e-71
Identity = 138/215 (64.19%), Postives = 162/215 (75.35%), Query Frame = 3
Query:   99 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLSEGTLL 740
            EL   A  I  PGKGILAADESTG++ KRL+ I VEN E NRR  R+LLF     + + + GVI F ETLYQ T  G  F  ++K+ G++ GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR+VLKI    PS+LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+ +C  VTE+VLAACYKAL+DHHV  EGTLL
Sbjct:   15 ELQDIAQRIVAPGKGILAADESTGSMAKRLNPIGVENTEENRRLYRQLLFSADERIDKCIGGVIFFHETLYQNTDDGTNFAQLIKDRGIVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRSVLKISDTTPSELAIMENANVLARYASICQQNGIVPIVEPEILPDGEHDLKRCQYVTEKVLAACYKALSDHHVYLEGTLL 229          
BLAST of FC929926 vs. ExPASy Swiss-Prot
Match: ALDOA_RAT (Fructose-bisphosphate aldolase A OS=Rattus norvegicus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 266.544 bits (680), Expect = 1.039e-70
Identity = 141/215 (65.58%), Postives = 159/215 (73.95%), Query Frame = 3
Query:   99 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLSEGTLL 740
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+ +C  VTE+VLAA YKAL+DHHV  EGTLL
Sbjct:   15 ELADIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSSLAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHVYLEGTLL 229          
BLAST of FC929926 vs. ExPASy Swiss-Prot
Match: ALDOA_MOUSE (Fructose-bisphosphate aldolase A OS=Mus musculus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 265.774 bits (678), Expect = 1.772e-70
Identity = 141/215 (65.58%), Postives = 159/215 (73.95%), Query Frame = 3
Query:   99 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLSEGTLL 740
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+ +C  VTE+VLAA YKAL+DHHV  EGTLL
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHVYLEGTLL 229          
BLAST of FC929926 vs. ExPASy Swiss-Prot
Match: ALDOA_RABIT (Fructose-bisphosphate aldolase A OS=Oryctolagus cuniculus GN=ALDOA PE=1 SV=2)

HSP 1 Score: 265.388 bits (677), Expect = 2.315e-70
Identity = 140/215 (65.12%), Postives = 159/215 (73.95%), Query Frame = 3
Query:   99 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLSEGTLL 740
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+ +C  VTE+VLAA YKAL+DHH+  EGTLL
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLL 229          
BLAST of FC929926 vs. ExPASy Swiss-Prot
Match: ALDOA_PONAB (Fructose-bisphosphate aldolase A OS=Pongo abelii GN=ALDOA PE=2 SV=3)

HSP 1 Score: 265.388 bits (677), Expect = 2.315e-70
Identity = 140/215 (65.12%), Postives = 159/215 (73.95%), Query Frame = 3
Query:   99 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLSEGTLL 740
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+ +C  VTE+VLAA YKAL+DHH+  EGTLL
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLL 229          
BLAST of FC929926 vs. ExPASy Swiss-Prot
Match: ALDOA_HUMAN (Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2)

HSP 1 Score: 265.388 bits (677), Expect = 2.315e-70
Identity = 140/215 (65.12%), Postives = 159/215 (73.95%), Query Frame = 3
Query:   99 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLSEGTLL 740
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+ +C  VTE+VLAA YKAL+DHH+  EGTLL
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLL 229          
BLAST of FC929926 vs. ExPASy Swiss-Prot
Match: ALDOA_PANTR (Fructose-bisphosphate aldolase A OS=Pan troglodytes GN=ALDOA PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.149e-69
Identity = 139/215 (64.65%), Postives = 158/215 (73.49%), Query Frame = 3
Query:   99 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLSEGTLL 740
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPI EPEIL DG HD+ +C  VTE+VLAA YKAL+DHH+  EGTLL
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIVGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIAEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLL 229          
The following BLAST results are available for this feature:
BLAST of FC929926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALF1_LAMJA1.110e-7264.65Fructose-bisphosphate aldolase, muscle type OS=Lam... [more]
ALDOB_CHICK3.230e-7266.19Fructose-bisphosphate aldolase B OS=Gallus gallus ... [more]
ALDOC_CARAU7.196e-7264.65Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALDCB_DANRE7.956e-7164.19Fructose-bisphosphate aldolase C-B OS=Danio rerio ... [more]
ALDOA_RAT1.039e-7065.58Fructose-bisphosphate aldolase A OS=Rattus norvegi... [more]
ALDOA_MOUSE1.772e-7065.58Fructose-bisphosphate aldolase A OS=Mus musculus G... [more]
ALDOA_RABIT2.315e-7065.12Fructose-bisphosphate aldolase A OS=Oryctolagus cu... [more]
ALDOA_PONAB2.315e-7065.12Fructose-bisphosphate aldolase A OS=Pongo abelii G... [more]
ALDOA_HUMAN2.315e-7065.12Fructose-bisphosphate aldolase A OS=Homo sapiens G... [more]
ALDOA_PANTR1.149e-6964.65Fructose-bisphosphate aldolase A OS=Pan troglodyte... [more]

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Properties
Property NameValue
Genbank descriptionC34001H09EF PostHarvC1 Citrus clementina cDNA clone C34001H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929926 ID=FC929926; Name=FC929926; organism=Citrus clementina; type=EST; length=740bp
GGCATAAAAATCGCTCTCTCTGTTTCTCCCTCTAACAAAACAAATTTTCT
ATCTTCAAGTAGATCACCATGTCTTGCTTCAAGGGCAAATACGCCGATGA
GCTCATTAAAAACGCTGCCTACATTGGCACCCCTGGAAAGGGTATCCTTG
CTGCTGATGAGTCAACAGGCACCATTGGCAAGCGTCTATCCAGCATCAAT
GTTGAGAATGTTGAGGCAAACAGGCGTGCTCTCCGCGAGCTCCTTTTCTG
CACTCCCGGTGCCCTTCAGTACCTCAGTGGTGTCATCCTCTTCGAGGAGA
CCCTCTACCAGAAGACTGCTGCTGGCAAGCCCTTTGTTGATGTCTTGAAG
GAGGGTGGAGTCCTCCCTGGAATTAAGGTTGACAAGGGTACTGTTGAGCT
TGCTGGTACCAATGGTGAGACCACCACCCAGGGTCTTGATGGCCTCGCCC
AGCGCTGCCAGAAATACTATGAAGCTGGTGCTCGTTTTGCCAAATGGCGT
GCTGTTCTTAAGATTGGCCCTAATGAGCCTTCGCAGCTGGCCATCAATGA
GAATGCCAATGGCCTGGCCCGATATGCTATCATCTGCCAGGAGAATGGCC
TTGTTCCCATTGTTGAACCTGAGATCCTTGTTGACGGTCCCCATGACATC
AACAAGTGTGCTGATGTGACCGAGCGTGTTCTTGCTGCATGCTACAAGGC
TCTGAATGACCACCATGTCCTTTCTGAGGGTACCCTTTTG
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