FC929935
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_PANTR (Glutamate dehydrogenase 2, mitochondrial OS=Pan troglodytes GN=GLUD2 PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46 Identity = 110/240 (45.83%), Postives = 141/240 (58.75%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKI--HDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGH----SPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHG-KNIAG-------QRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAA 679 P KGGIRY +V DEV ALA LMT+K AV ++P+GGAK G+ NP + + +ELE++TR FT ++ IG DVPAPDM TG + M+WI D Y+ GH + A VTGKPI GG GR +ATGRGV E +NE +I G + FV+QGFGNVG + R + G K +AV + G+I N GID L +H + GF + SIL DCD+LIPAA Sbjct: 145 PCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGVDVPAPDMNTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFRDKTFVVQGFGNVGLHSMRYLHRFGAKCIAVGESDGSIWNPDGIDPKELEDFRLQHGSLLGFPKAKPYE-GSILEIDCDILIPAA 383
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE3_BOVIN (Glutamate dehydrogenase 1, mitochondrial OS=Bos taurus GN=GLUD1 PE=1 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46 Identity = 108/240 (45.00%), Postives = 137/240 (57.08%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKI--HDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGH----SPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHG--------KNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAA 679 P KGGIRY +V DEV ALA LMT+K AV ++P+GGAK G+ NP + + +ELE++TR FT ++ IG DVPAPDM TG + M+WI D Y+ GH + A VTGKPI GG GR +ATGRGV E +NE + FV+QGFGNVG + R + G K + V + G+I N GID L +H + GF I SIL DCD+LIPAA Sbjct: 145 PCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKA-KIYEGSILEVDCDILIPAA 383
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE3_PYRKO (Glutamate dehydrogenase OS=Pyrococcus kodakaraensis GN=gdhA PE=1 SV=4) HSP 1 Score: 179.489 bits (454), Expect = 1.525e-44 Identity = 101/239 (42.26%), Postives = 140/239 (58.58%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYS---KFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHG-KNIAGQRFVIQGFGNVGSWAARLIGEK-GGKIVAVSDISGAIKNSKGI-DVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVINR 700 P KGGIR+HP V ALA MTWK AV ++PYGG KGGI +P LS E ERL R + + ++D+IG D+PAPD+ T P+ MAW++DEY + G + V+TGKP +GG + R AT RG F G ++ G+ IQG+GN G + +++ E+ G K+VAVSD G I N G+ +LK KEH VK G +I + +L + D+L P+A+ GVI + Sbjct: 67 PTKGGIRWHPAETLSTVKALATWMTWKVAVVDLPYGGGKGGIIVDPKKLSEREQERLARSYIRAVYDVIGPWTDIPAPDVYTNPKIMAWMMDEYETIMRRKGPAFGVITGKPPGVGGIVARMDATARGAAFTIREAAKALGWDDLKGKTIAIQGYGNAGYYLHKIMSEEFGMKVVAVSDSKGGIYNPDGLPPADEVLKWKKEHGSVKDMPGTQNITNEELLELEVDILAPSAIEGVITK 305
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE2_PEPAS (NAD-specific glutamate dehydrogenase OS=Peptostreptococcus asaccharolyticus PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.398e-44 Identity = 92/238 (38.66%), Postives = 139/238 (58.40%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAV--VTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDI-----SGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVI 694 P KGG+R+HP V+ DEV AL+ MT+K +PYGG KGGI +P +LS ELE+L+R + + ++ +G D+PAPD+ T Q M+W +DEY K +G + TGKP+ GGS GR+ ATG GV G + + +QGFGNVG++ + I +GGK+ A+++ + A+ N GID LL + + ++ + GF G + I ++ D+++PAAL VI Sbjct: 68 PSKGGVRFHPNVNMDEVKALSLWMTFKGGALGLPYGGGKGGICVDPAELSERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGVAVVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERITDEEFWTKEYDIIVPAALENVI 305
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE3_CHICK (Glutamate dehydrogenase 1, mitochondrial OS=Gallus gallus GN=GLUD1 PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.061e-41 Identity = 103/240 (42.92%), Postives = 137/240 (57.08%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKI--HDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGH----SPAVVTGKPIDLGGSLGRDAATGRGVLFATEALL-NEHGKNIAG-------QRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAA 679 P KGGIRY +V DEV ALA LMT+K AV ++P+GGAK G+ NP + + +LE++TR FT ++ IG DVPAP+M TG + M+WI D Y+ GH + A VT I GG GR +ATGRG+ E + N +I G + F +QGFGNVG + R + G K VAV + G+I N GID L + +H + GF ++ SIL DCD+LIPAA Sbjct: 91 PCKGGIRYSLDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDEDLEKITRRFTMELAKKGFIGPGVDVPAPNMSTGEREMSWIADTYASTIGHYDINAHACVTKPGISQGGIHGRISATGRGLFGHIENFIENASYMSILGMTPGFGDKTFAVQGFGNVGLHSMRYLHRFGAKCVAVGEFDGSIWNPDGIDPKELEDYKLQHGTIMGFPKAQKLE-GSILETDCDILIPAA 329
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE3_RHISN (Probable glutamate dehydrogenase OS=Rhizobium sp. (strain NGR234) GN=NGR_a01340 PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.059e-37 Identity = 93/246 (37.80%), Postives = 140/246 (56.91%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIG-IHADVPAPDMGTGPQTMAWILDEYSKFHG----HSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLN-------EHGKNIAGQRFVIQGFGNVGSWAARLIGEK-GGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIED-CDVLIPAALGGVIN 697 P+KG IRY D +EV ALA LMT K ++ ++P+GG+KG + +P + ELE +TR FTQ+++ D+GTG + MAW++DE+ + + S A VTGKP+ GG GR +TGRGV FA ++ L + +N+ G VIQGFGNVG AAR + E+ ++ +++ G + N +G+ + +L +H + GF G SI + +E CDVLIPAA+ I+ Sbjct: 48 PVKGDIRYASNADAEEVEALAALMTLKCSLVDVPFGGSKGALKIDPRGWTPQELEHITRRFTQEMNKRPDRARRQCVGSDIGTGEREMAWMMDEFRRANPTDVVTSGACVTGKPLSKGGIAGRAESTGRGVQFAIQSSLRDTRTPGLDGRRNLKGASTVIQGFGNVGYHAARFLSEEDDARVTVLAERDGYVANPEGLSIEALKQHQIRTGSILGFDGAKSIAGDMCGVEQPCDVLIPAAMENAIH 293
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_CORGL (NADP-specific glutamate dehydrogenase OS=Corynebacterium glutamicum GN=gdh PE=3 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 3.298e-31 Identity = 77/239 (32.22%), Postives = 124/239 (51.88%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKF-HGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSID------SNSILIEDCDVLIPAALGGVIN 697 P KGG+R+HP V+ V L +K ++ +P GG KGG +P S E+ R + F ++H IG + DVPA D+G G + + ++ Y + + H V+TGK + GGSL R ATG G ++ ++ G++I+GQ+ ++ G GNV ++A E G ++ SD SG + G+DV + L+ +KE R + D ++ SI CD+ +P A +N Sbjct: 90 PYKGGLRFHPSVNLGIVKFLGFEQIFKNSLTGLPIGGGKGGSDFDPKGKSDLEIMRFCQSFMTELHRHIGEYRDVPAGDIGVGGREIGYLFGHYRRMANQHESGVLTGKGLTWGGSLVRTEATGYGCVYFVSEMIKAKGESISGQKIIVSGSGNVATYAIEKAQELGATVIGFSDSSGWVHTPNGVDV-AKLREIKEVRRARVSVYADEVEGATYHTDGSIWDLKCDIALPCATQNELN 327
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_COREF (NADP-specific glutamate dehydrogenase OS=Corynebacterium efficiens GN=gdh PE=3 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 2.138e-30 Identity = 75/233 (32.19%), Postives = 123/233 (52.79%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKF-HGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSID------SNSILIEDCDVLIPAA 679 P KGG+R+HP V+ V L +K ++ +P GG KGG +P S E+ R + F ++H IG + DVPA D+G G + + ++ Y + + H V+TGK + GGSL R ATG G ++ + ++ G+ + G++ ++ G GNV ++A + + E G +V SD SG + G+DV + L+ +KE R + S D ++ SI D+ +P A Sbjct: 90 PYKGGLRFHPSVNLGIVKFLGFEQIFKNSLTGLPIGGGKGGSDFDPKGKSELEIMRFCQSFMTELHRHIGEYRDVPAGDIGVGGREIGYLFGHYRRLANQHESGVLTGKGLTWGGSLVRTEATGFGTVYFVQEMIKAEGETLEGKKVIVSGSGNVATYAIQKVQELGAVVVGFSDSSGWVSTPNGVDV-AKLREIKEVRRARVSSYADEVEGAEYHTDGSIWDLTADIALPCA 321
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_PRERU (NAD(P)-specific glutamate dehydrogenase OS=Prevotella ruminicola GN=gdhA PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.032e-29 Identity = 79/240 (32.92%), Postives = 125/240 (52.08%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSL-----LKHVKEHRGVKGFS---GGDSIDSNSILIEDCDVLIPAALGGVIN 697 P KGG+R+H V+ + LA T+K ++ +P GGAKGG +P S E+ R + F +++ LIG DVPA D+G G + + ++ +Y K ++TGK ++ GGSL R ATG G ++ E +L G+++ G+ ++ G GNV + + + G K V SD +G I + GID L LK+VK R +K ++ G +++ E D+ P A IN Sbjct: 86 PYKGGLRFHKSVNASILKFLAFEQTFKNSLTTLPMGGAKGGSDFDPHGKSDMEVMRFCQAFMNELYRLIGPDEDVPAGDIGVGGREVGYMFGQYKKLTHQFQGILTGKGLEFGGSLIRPEATGYGNVYFLEDMLKTRGESLEGKTVLVSGSGNVAQYTIEKLLQLGAKPVTCSDSNGYIYDPDGIDAEKLAFIMELKNVKRGR-IKEYAEKYGVKYVENARPWGEKADIATPCATQDEIN 324
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_HELPJ (NADP-specific glutamate dehydrogenase OS=Helicobacter pylori J99 GN=gdhA PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.613e-28 Identity = 69/198 (34.85%), Postives = 105/198 (53.03%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHR 595 P KGG+R+HP V+ + L K ++ + GGAKGG +P + S E+ R + F +++ IG DVPA D+G G + + ++ +Y K V+TGK + GGSL R ATG G ++ E +L E ++ G+ + G GNV + + + G K V SD +G I + GID+ LLK +KE R Sbjct: 86 PYKGGLRFHPSVNESVIKFLGFEQVLKNSLTTLAMGGAKGGSDFDPKEKSEHEIMRFCQAFMNELYRHIGATTDVPAGDIGVGEREIGYLFGQYKKLVNRFEGVLTGKGLTYGGSLCRKEATGYGCVYFAEEMLQERNSSLEGKVCSVSGSGNVAIYTIEKLLQIGAKPVTASDSNGMIYDKDGIDL-ELLKEIKEAR 282 The following BLAST results are available for this feature:
BLAST of FC929935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929935 ID=FC929935; Name=FC929935; organism=Citrus clementina; type=EST; length=702bpback to top |