FC929935
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE2_CLOSY (NAD-specific glutamate dehydrogenase OS=Clostridium symbiosum GN=gdh PE=1 SV=4) HSP 1 Score: 116.316 bits (290), Expect = 1.586e-25 Identity = 67/199 (33.67%), Postives = 103/199 (51.76%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKF-HGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHR 595 P KGG+R+ P V+ + L +K ++ +P GGAKGG +P S E+ R + F +++ IG DVPA D+G G + + ++ +Y K G V+TGK GGSL R ATG G ++ EA++ + G+ + GFGNV AA+ + E G K V +S G I + +GI + ++ E R Sbjct: 88 PYKGGLRFAPSVNLSIMKFLGFEQAFKDSLTTLPMGGAKGGSDFDPNGKSDREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVYYVEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMR 286
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_TUBBO (NADP-specific glutamate dehydrogenase OS=Tuber borchii GN=GDH PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.532e-25 Identity = 66/182 (36.26%), Postives = 99/182 (54.40%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLN--EHGK-NIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAI 538 P KGG+R+HP V+ + L T+K A+ + GG KGG +P S +E+ R F +++ IG DVPA D+G G + + ++ Y + V+TGK I GGSL R ATG G+++ +++ GK AG+R I G GNV +AA + E GGK++ +SD GA+ Sbjct: 75 PYKGGLRFHPTVNLSILKFLGFEQTFKNALTGLNMGGGKGGSDFDPKGKSDNEIRRFCYSFMRELSKHIGQFTDVPAGDIGVGGREIGYLFGAYESYKNQFEGVLTGKGITWGGSLIRPEATGYGLVYYVAHMISYASGGKETFAGKRVAISGSGNVAQYAALKVLELGGKVITLSDSKGAL 256
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE5_YEAST (NADP-specific glutamate dehydrogenase 2 OS=Saccharomyces cerevisiae GN=GDH3 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.613e-25 Identity = 66/188 (35.11%), Postives = 106/188 (56.38%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLN--EHGK-NIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGI 556 P KGG+R+HP V+ + L +K A+ + GG KGG+ + S +E+ R+ F +++ IG DVPA D+G G + + ++ Y + V+TGK ++ GGSL R ATG G+++ T+A+++ +GK + G+R I G GNV +AA + E GG +V++SD G I + GI Sbjct: 73 PYKGGLRFHPSVNLSILKFLGFEQIFKNALTGLDMGGGKGGLCVDLKGKSDNEIRRICYAFMRELSRHIGKDTDVPAGDIGVGGREIGYLFGAYRSYKNSWEGVLTGKGLNWGGSLIRPEATGFGLVYYTQAMIDYATNGKESFEGKRVTISGSGNVAQYAALKVIELGGIVVSLSDSKGCIISETGI 260
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_YEAST (NADP-specific glutamate dehydrogenase 1 OS=Saccharomyces cerevisiae GN=GDH1 PE=1 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 4.613e-25 Identity = 65/188 (34.57%), Postives = 106/188 (56.38%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLN--EHGK-NIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGI 556 P KGG+R+HP V+ + L +K ++ + GG KGG+ + S +E+ R+ F +++ IG DVPA D+G G + + ++ Y + V+TGK ++ GGSL R ATG G+++ T+A+++ +GK + G+R I G GNV +AA + E GG +V++SD G I + GI Sbjct: 72 PYKGGLRFHPSVNLSILKFLGFEQIFKNSLTGLDMGGGKGGLCVDLKGRSNNEIRRICYAFMRELSRHIGQDTDVPAGDIGVGGREIGYLFGAYRSYKNSWEGVLTGKGLNWGGSLIRPEATGYGLVYYTQAMIDYATNGKESFEGKRVTISGSGNVAQYAALKVIELGGTVVSLSDSKGCIISETGI 259
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE2_BACFR (NAD-specific glutamate dehydrogenase OS=Bacteroides fragilis GN=gdhB PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 6.025e-25 Identity = 67/185 (36.22%), Postives = 94/185 (50.81%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGI 556 P KGGIR+H V+ + L T+K A+ +P GG KGG +P S +E+ R + F ++ +G DVPA D+G G + + ++ Y K TGK ++ GGSL R ATG G L+ +L G +I G+ I GFGNV AA E G K+V +S G I + GI Sbjct: 86 PYKGGIRFHASVNLSILKFLGFEQTFKNALTTLPMGGGKGGSDFSPRGKSDAEIMRFCQAFMLELWRHLGPDMDVPAGDIGVGGREVGYMFGMYKKLTREFTGTFTGKGLEFGGSLIRPEATGFGGLYFVNQMLQTKGIDIKGKTVAISGFGNVAWGAATKATELGAKVVTISGPDGYIYDPNGI 270
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_SACBA (NADP-specific glutamate dehydrogenase 1 OS=Saccharomyces bayanus GN=GDH1 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.869e-25 Identity = 65/188 (34.57%), Postives = 106/188 (56.38%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLN--EHGK-NIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGI 556 P KGG+R+HP V+ + L +K ++ + GG KGG+ + S +E+ R+ F +++ IG DVPA D+G G + + ++ Y + V+TGK ++ GGSL R ATG G+++ T+A+++ +GK + G+R I G GNV +AA + E GG +V++SD G I + GI Sbjct: 72 PYKGGLRFHPSVNLSILKFLGFEQIFKNSLTGLDMGGGKGGLCVDLKGRSNNEIRRICYAFMRELSRHIGQDTDVPAGDIGVGGREIGYLFGAYRTYKNSWEGVLTGKGLNWGGSLIRPEATGYGLVYYTQAMIDYATNGKESFEGKRVTISGSGNVAQFAALKVIELGGTVVSLSDSKGCIISETGI 259
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_NEUSI (NADP-specific glutamate dehydrogenase OS=Neurospora sitophila GN=GDH PE=2 SV=3) HSP 1 Score: 112.849 bits (281), Expect = 1.753e-24 Identity = 70/203 (34.48%), Postives = 104/203 (51.23%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGK-NIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAI--KNSKGIDVPSL--LKHVKEHR 595 P KGG+R HP V+ + L +K A+ + GG KGG +P S +E+ R F ++H IG DVPA D+G G + + ++ Y K V+TGK + GGSL R ATG G+++ +L G + AG+R + G GNV +AA + E G +V++SD GA+ GI V + + +KE R Sbjct: 76 PYKGGLRLHPSVNLSILKFLGFEQIFKNALTGLSMGGGKGGADFDPKGKSDAEIRRFCCAFMAELHKHIGADTDVPAGDIGVGGREIGYMFGAYRKAANRFEGVLTGKGLSWGGSLIRPEATGYGLVYYVGHMLEYSGAGSYAGKRVALSGSGNVAQYAALKLIELGATVVSLSDSKGALVATGESGITVEDINAIMAIKEAR 278
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_NEUIN (NADP-specific glutamate dehydrogenase OS=Neurospora intermedia GN=GDH PE=2 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 2.290e-24 Identity = 70/203 (34.48%), Postives = 104/203 (51.23%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGK-NIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAI--KNSKGIDVPSL--LKHVKEHR 595 P KGG+R HP V+ + L +K A+ + GG KGG +P S +E+ R F ++H IG DVPA D+G G + + ++ Y K V+TGK + GGSL R ATG G+++ +L G + AG+R + G GNV +AA + E G +V++SD GA+ GI V + + +KE R Sbjct: 76 PYKGGLRLHPSVNLSILKFLGFEQIFKNALTGLSMGGGKGGADFDPKGKSDAEIRRFCCAFMAELHKHIGADTDVPAGDIGVGGREIGYMFGAYRKAANRFEGVLTGKGLSWGGSLIRPEATGYGLVYYVGHMLEYSGAGSYAGKRVALSGSGNVAQYAALKLIELGATVVSLSDSKGALVATGESGITVEDINAVMAIKEAR 278
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_NEUCR (NADP-specific glutamate dehydrogenase OS=Neurospora crassa GN=gdh PE=1 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 2.290e-24 Identity = 70/203 (34.48%), Postives = 104/203 (51.23%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGK-NIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAI--KNSKGIDVPSL--LKHVKEHR 595 P KGG+R HP V+ + L +K A+ + GG KGG +P S +E+ R F ++H IG DVPA D+G G + + ++ Y K V+TGK + GGSL R ATG G+++ +L G + AG+R + G GNV +AA + E G +V++SD GA+ GI V + + +KE R Sbjct: 76 PYKGGLRLHPSVNLSILKFLGFEQIFKNALTGLSMGGGKGGADFDPKGKSDAEIRRFCCAFMAELHKHIGADTDVPAGDIGVGGREIGYMFGAYRKAANRFEGVLTGKGLSWGGSLIRPEATGYGLVYYVGHMLEYSGAGSYAGKRVALSGSGNVAQYAALKLIELGATVVSLSDSKGALVATGESGITVEDINAVMAIKEAR 278
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_GIALA (NADP-specific glutamate dehydrogenase OS=Giardia lamblia PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.290e-24 Identity = 63/202 (31.19%), Postives = 104/202 (51.49%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSL--LKHVK-EHRG 598 P KGG+R+HP V+ + L K ++ +P GG KGG +P S +E+ R + F ++ +G DVPA D+G G + + ++ +Y + V+TGK + GGS R ATG G ++ E + ++ I G+ ++ G GNV +A + + G K++ SD +G I + G + L L ++K E RG Sbjct: 87 PYKGGLRFHPSVNLSILKFLGFEQILKNSLTTLPMGGGKGGSDFDPKGKSDNEVMRFCQSFMTELQRHVGADTDVPAGDIGVGAREIGYLYGQYKRLRNEFTGVLTGKNVKWGGSFIRPEATGYGAVYFLEEMCKDNNTVIRGKNVLLSGSGNVAQFACEKLIQLGAKVLTFSDSNGTIVDKDGFNEEKLAHLMYLKNEKRG 288 The following BLAST results are available for this feature:
BLAST of FC929935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929935 ID=FC929935; Name=FC929935; organism=Citrus clementina; type=EST; length=702bpback to top |